RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 RIMBP3CA6NJZ7 1639 aa41.45■■■■■ 4.23
PERM1-203ENST00000479361 RIMBP3BA6NNM3 1639 aa41.45■■■■■ 4.23
PERM1-203ENST00000479361 RIMBP3Q9UFD9 1639 aa41.45■■■■■ 4.23
PERM1-203ENST00000479361 SHROOM2Q13796 1616 aa41.38■■■■■ 4.21
PERM1-203ENST00000479361 JPH4Q96JJ6 628 aa41.38■■■■■ 4.21
PERM1-203ENST00000479361 IQGAP2Q13576 1575 aa41.28■■■■■ 4.2
PERM1-203ENST00000479361 KIF21BO75037 1637 aa41.26■■■■■ 4.2
PERM1-203ENST00000479361 PRG4Q92954 1404 aaPredicted RBP41.25■■■■■ 4.19
PERM1-203ENST00000479361 ARAP1Q96P48 1450 aa41.19■■■■■ 4.18
PERM1-203ENST00000479361 CTTNBP2Q8WZ74 1663 aa41.19■■■■■ 4.18
PERM1-203ENST00000479361 ERCC6L2Q5T890 1561 aa41.17■■■■■ 4.18
PERM1-203ENST00000479361 CYB5RLQ6IPT4 315 aa41.14■■■■■ 4.18
PERM1-203ENST00000479361 GOLGA3Q08378 1498 aa41.08■■■■■ 4.17
PERM1-203ENST00000479361 CARMIL2Q6F5E8 1435 aa41.07■■■■■ 4.16
PERM1-203ENST00000479361 UGGT2Q9NYU1 1516 aa41.07■■■■■ 4.16
PERM1-203ENST00000479361 UBTFP17480 764 aaKnown RBP40.97■■■■■ 4.15
PERM1-203ENST00000479361 EHMT2Q96KQ7 1210 aa40.97■■■■■ 4.15
PERM1-203ENST00000479361 DISP1Q96F81 1524 aa40.94■■■■■ 4.14
PERM1-203ENST00000479361 TNIKQ9UKE5 1360 aa40.88■■■■■ 4.14
PERM1-203ENST00000479361 KIAA0556O60303 1618 aa40.86■■■■■ 4.13
PERM1-203ENST00000479361 PTPRGP23470 1445 aa40.83■■■■■ 4.13
PERM1-203ENST00000479361 TTBK1Q5TCY1 1321 aaPredicted RBP40.73■■■■■ 4.11
PERM1-203ENST00000479361 RANGAP1P46060 587 aaPredicted RBP40.72■■■■■ 4.11
PERM1-203ENST00000479361 SAMD9Q5K651 1589 aa40.69■■■■■ 4.11
PERM1-203ENST00000479361 EFCAB5A4FU69 1503 aa40.63■■■■■ 4.1
PERM1-203ENST00000479361 P3H3Q8IVL6 736 aa40.63■■■■■ 4.09
PERM1-203ENST00000479361 UACAQ9BZF9 1416 aa40.56■■■■■ 4.08
PERM1-203ENST00000479361 ADCY10Q96PN6 1610 aa40.54■■■■■ 4.08
PERM1-203ENST00000479361 NPM1P06748 294 aaKnown RBP eCLIP40.5■■■■■ 4.07
PERM1-203ENST00000479361 UHRF1BP1LA0JNW5 1464 aa40.5■■■■■ 4.07
PERM1-203ENST00000479361 FHOD3Q2V2M9 1422 aa40.49■■■■■ 4.07
PERM1-203ENST00000479361 ABCC2Q92887 1545 aa40.46■■■■■ 4.07
PERM1-203ENST00000479361 ARHGAP35Q9NRY4 1499 aa40.44■■■■■ 4.06
PERM1-203ENST00000479361 PLB1Q6P1J6 1458 aa40.43■■■■■ 4.06
PERM1-203ENST00000479361 LOC105371045A0A1W2PR82 267 aa40.41■■■■■ 4.06
PERM1-203ENST00000479361 ABCA8O94911 1581 aa40.4■■■■■ 4.06
PERM1-203ENST00000479361 CLIP1P30622 1438 aa40.34■■■■■ 4.05
PERM1-203ENST00000479361 KDM5BQ9UGL1 1544 aa40.29■■■■■ 4.04
PERM1-203ENST00000479361 FMN1Q68DA7 1419 aa40.28■■■■■ 4.04
PERM1-203ENST00000479361 MAPKBP1O60336 1514 aa40.26■■■■■ 4.04
PERM1-203ENST00000479361 RAPGEF6Q8TEU7 1601 aa40.25■■■■■ 4.03
PERM1-203ENST00000479361 CEP162Q5TB80 1403 aa40.24■■■■■ 4.03
PERM1-203ENST00000479361 TRHP20396 242 aaPredicted RBP40.21■■■■■ 4.03
PERM1-203ENST00000479361 ZCCHC11Q5TAX3 1644 aaKnown RBP40.18■■■■■ 4.02
PERM1-203ENST00000479361 ASXL2Q76L83 1435 aa40.11■■■■■ 4.01
PERM1-203ENST00000479361 NUP153P49790 1475 aaKnown RBP40.11■■■■■ 4.01
PERM1-203ENST00000479361 ATP10BO94823 1461 aa40.08■■■■■ 4.01
PERM1-203ENST00000479361 ARID3CA6NKF2 412 aa40.07■■■■■ 4.01
PERM1-203ENST00000479361 ABCC10Q5T3U5 1492 aa40.03■■■■■ 4
PERM1-203ENST00000479361 ATP1B4Q9UN42 357 aaPredicted RBP40.01■■■■■ 4
PERM1-203ENST00000479361 HECW1Q76N89 1606 aa40.01■■■■■ 4
PERM1-203ENST00000479361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.99■■■■□ 3.99
PERM1-203ENST00000479361 HNRNPUL2Q1KMD3 747 aaKnown RBP39.99■■■■□ 3.99
PERM1-203ENST00000479361 WDR7Q9Y4E6 1490 aa39.97■■■■□ 3.99
PERM1-203ENST00000479361 CASKIN1Q8WXD9 1431 aa39.97■■■■□ 3.99
PERM1-203ENST00000479361 FAM69CQ0P6D2 419 aa39.95■■■■□ 3.99
PERM1-203ENST00000479361 DIP2BQ9P265 1576 aa39.95■■■■□ 3.99
PERM1-203ENST00000479361 PCF11O94913 1555 aaKnown RBP39.92■■■■□ 3.98
PERM1-203ENST00000479361 FYCO1Q9BQS8 1478 aa39.9■■■■□ 3.98
PERM1-203ENST00000479361 KIF13AQ9H1H9 1805 aa39.89■■■■□ 3.98
PERM1-203ENST00000479361 EPRSP07814 1512 aaKnown RBP39.89■■■■□ 3.98
PERM1-203ENST00000479361 CDK13Q14004 1512 aaKnown RBP39.85■■■■□ 3.97
PERM1-203ENST00000479361 PLEKHD1A6NEE1 506 aa39.83■■■■□ 3.97
PERM1-203ENST00000479361 GLI2P10070 1586 aa39.82■■■■□ 3.97
PERM1-203ENST00000479361 KCNH8Q96L42 1107 aa39.8■■■■□ 3.96
PERM1-203ENST00000479361 CCDC18Q5T9S5 1454 aa39.8■■■■□ 3.96
PERM1-203ENST00000479361 CDK11AQ9UQ88 783 aaPredicted RBP39.79■■■■□ 3.96
PERM1-203ENST00000479361 VPS8Q8N3P4 1428 aa39.74■■■■□ 3.95
PERM1-203ENST00000479361 LRRIQ1Q96JM4 1722 aa39.71■■■■□ 3.95
PERM1-203ENST00000479361 MAP3K4Q9Y6R4 1608 aa39.63■■■■□ 3.93
PERM1-203ENST00000479361 CFAP43Q8NDM7 1665 aa39.59■■■■□ 3.93
PERM1-203ENST00000479361 TROQ12816 1431 aaPredicted RBP39.58■■■■□ 3.93
PERM1-203ENST00000479361 CD109Q6YHK3 1445 aa39.57■■■■□ 3.93
PERM1-203ENST00000479361 ABCA9Q8IUA7 1624 aa39.56■■■■□ 3.92
PERM1-203ENST00000479361 TSPOAP1O95153 1857 aa39.56■■■■□ 3.92
PERM1-203ENST00000479361 TEX14Q8IWB6 1497 aa39.49■■■■□ 3.91
PERM1-203ENST00000479361 MAGI3Q5TCQ9 1506 aa39.48■■■■□ 3.91
PERM1-203ENST00000479361 KIF14Q15058 1648 aa39.47■■■■□ 3.91
PERM1-203ENST00000479361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.46■■■■□ 3.91
PERM1-203ENST00000479361 PPRC1Q5VV67 1664 aaKnown RBP39.46■■■■□ 3.91
PERM1-203ENST00000479361 MTUS2Q5JR59 1369 aa39.43■■■■□ 3.9
PERM1-203ENST00000479361 TTC37Q6PGP7 1564 aa39.39■■■■□ 3.9
PERM1-203ENST00000479361 TIAM1Q13009 1591 aa39.38■■■■□ 3.9
PERM1-203ENST00000479361 MAP3K1Q13233 1512 aa39.37■■■■□ 3.89
PERM1-203ENST00000479361 APLP2Q06481 763 aa39.35■■■■□ 3.89
PERM1-203ENST00000479361 EHBP1L1Q8N3D4 1523 aa39.33■■■■□ 3.89
PERM1-203ENST00000479361 PLCH2O75038 1416 aa39.27■■■■□ 3.88
PERM1-203ENST00000479361 PHLDB1Q86UU1 1377 aa39.26■■■■□ 3.88
PERM1-203ENST00000479361 KDM6BO15054 1643 aa39.25■■■■□ 3.87
PERM1-203ENST00000479361 NEO1Q92859 1461 aa39.24■■■■□ 3.87
PERM1-203ENST00000479361 MYO5CQ9NQX4 1742 aa39.23■■■■□ 3.87
PERM1-203ENST00000479361 LRRC9Q6ZRR7 1453 aa39.23■■■■□ 3.87
PERM1-203ENST00000479361 ARAP3Q8WWN8 1544 aa39.22■■■■□ 3.87
PERM1-203ENST00000479361 FANCAO15360 1455 aa39.21■■■■□ 3.87
PERM1-203ENST00000479361 CFAP74Q9C0B2 1584 aa39.2■■■■□ 3.87
PERM1-203ENST00000479361 EFCAB2Q5VUJ9 269 aa39.16■■■■□ 3.86
PERM1-203ENST00000479361 KANK4Q5T7N3 995 aaPredicted RBP39.14■■■■□ 3.86
PERM1-203ENST00000479361 CCNB3Q8WWL7 1395 aa39.13■■■■□ 3.85
PERM1-203ENST00000479361 SUPT6HQ7KZ85 1726 aaKnown RBP39.13■■■■□ 3.85
PERM1-203ENST00000479361 ARHGAP5Q13017 1502 aa39.13■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms