RNA–Protein interactions for RNA: ENST00000478576.5

GFM1-208, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2 BASIC

Gene GFM1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-208ENST00000478576 LAMC3Q9Y6N6 1575 aa24.01■■□□□ 1.43
GFM1-208ENST00000478576 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
GFM1-208ENST00000478576 EFCAB5A4FU69 1503 aa24■■□□□ 1.43
GFM1-208ENST00000478576 WDR97A6NE52 1622 aa24■■□□□ 1.43
GFM1-208ENST00000478576 CTTNBP2Q8WZ74 1663 aa23.98■■□□□ 1.43
GFM1-208ENST00000478576 PCF11O94913 1555 aaKnown RBP23.97■■□□□ 1.43
GFM1-208ENST00000478576 NESP48681 1621 aa23.97■■□□□ 1.43
GFM1-208ENST00000478576 PELP1Q8IZL8 1130 aaKnown RBP23.93■■□□□ 1.42
GFM1-208ENST00000478576 AQRO60306 1485 aaKnown RBP eCLIP23.93■■□□□ 1.42
GFM1-208ENST00000478576 MIER1Q8N108 512 aa23.92■■□□□ 1.42
GFM1-208ENST00000478576 FYCO1Q9BQS8 1478 aa23.91■■□□□ 1.42
GFM1-208ENST00000478576 URB2Q14146 1524 aaKnown RBP23.88■■□□□ 1.41
GFM1-208ENST00000478576 PHLDB1Q86UU1 1377 aa23.87■■□□□ 1.41
GFM1-208ENST00000478576 CASKIN1Q8WXD9 1431 aa23.87■■□□□ 1.41
GFM1-208ENST00000478576 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
GFM1-208ENST00000478576 GTF3C3Q9Y5Q9 886 aa23.86■■□□□ 1.41
GFM1-208ENST00000478576 RAB3GAP2Q9H2M9 1393 aa23.86■■□□□ 1.41
GFM1-208ENST00000478576 FHOD3Q2V2M9 1422 aa23.83■■□□□ 1.41
GFM1-208ENST00000478576 SETD5Q9C0A6 1442 aa23.83■■□□□ 1.4
GFM1-208ENST00000478576 MAPKBP1O60336 1514 aa23.82■■□□□ 1.4
GFM1-208ENST00000478576 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.8■■□□□ 1.4
GFM1-208ENST00000478576 FMN1Q68DA7 1419 aa23.78■■□□□ 1.4
GFM1-208ENST00000478576 SAMD9Q5K651 1589 aa23.77■■□□□ 1.4
GFM1-208ENST00000478576 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
GFM1-208ENST00000478576 ITGAEP38570 1179 aa23.76■■□□□ 1.39
GFM1-208ENST00000478576 SNAPC4Q5SXM2 1469 aa23.74■■□□□ 1.39
GFM1-208ENST00000478576 P3H3Q8IVL6 736 aa23.74■■□□□ 1.39
GFM1-208ENST00000478576 GAPVD1Q14C86 1478 aa23.72■■□□□ 1.39
GFM1-208ENST00000478576 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.39
GFM1-208ENST00000478576 YTHDC1Q96MU7 727 aaKnown RBP23.68■■□□□ 1.38
GFM1-208ENST00000478576 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
GFM1-208ENST00000478576 TARBP1Q13395 1621 aaKnown RBP23.67■■□□□ 1.38
GFM1-208ENST00000478576 LRRIQ1Q96JM4 1722 aa23.66■■□□□ 1.38
GFM1-208ENST00000478576 FAM50AQ14320 339 aaKnown RBP23.65■■□□□ 1.38
GFM1-208ENST00000478576 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
GFM1-208ENST00000478576 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
GFM1-208ENST00000478576 FGD6Q6ZV73 1430 aa23.62■■□□□ 1.37
GFM1-208ENST00000478576 ATP1B4Q9UN42 357 aaPredicted RBP23.61■■□□□ 1.37
GFM1-208ENST00000478576 TIMELESSQ9UNS1 1208 aa23.59■■□□□ 1.37
GFM1-208ENST00000478576 PBRM1Q86U86 1689 aa23.56■■□□□ 1.36
GFM1-208ENST00000478576 SUPT6HQ7KZ85 1726 aaKnown RBP23.54■■□□□ 1.36
GFM1-208ENST00000478576 MTUS2Q5JR59 1369 aa23.54■■□□□ 1.36
GFM1-208ENST00000478576 EHBP1L1Q8N3D4 1523 aa23.53■■□□□ 1.36
GFM1-208ENST00000478576 NCOA2Q15596 1464 aa23.5■■□□□ 1.35
GFM1-208ENST00000478576 MYOM3Q5VTT5 1437 aa23.49■■□□□ 1.35
GFM1-208ENST00000478576 HFM1A2PYH4 1435 aa23.49■■□□□ 1.35
GFM1-208ENST00000478576 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
GFM1-208ENST00000478576 CCDC18Q5T9S5 1454 aa23.47■■□□□ 1.35
GFM1-208ENST00000478576 DNAJC5BQ9UF47 199 aa23.47■■□□□ 1.35
GFM1-208ENST00000478576 PTPN23Q9H3S7 1636 aa23.46■■□□□ 1.35
GFM1-208ENST00000478576 ADAMTS12P58397 1594 aa23.46■■□□□ 1.35
GFM1-208ENST00000478576 UGGT2Q9NYU1 1516 aa23.46■■□□□ 1.35
GFM1-208ENST00000478576 SIN3AQ96ST3 1273 aa23.45■■□□□ 1.34
GFM1-208ENST00000478576 IQGAP2Q13576 1575 aa23.44■■□□□ 1.34
GFM1-208ENST00000478576 HECW1Q76N89 1606 aa23.43■■□□□ 1.34
GFM1-208ENST00000478576 PTPRKQ15262 1439 aa23.43■■□□□ 1.34
GFM1-208ENST00000478576 UACAQ9BZF9 1416 aa23.42■■□□□ 1.34
GFM1-208ENST00000478576 MRC2Q9UBG0 1479 aa23.42■■□□□ 1.34
GFM1-208ENST00000478576 MAGI3Q5TCQ9 1506 aa23.4■■□□□ 1.34
GFM1-208ENST00000478576 TCOF1Q13428 1488 aaKnown RBP23.38■■□□□ 1.33
GFM1-208ENST00000478576 NAIPQ13075 1403 aa23.38■■□□□ 1.33
GFM1-208ENST00000478576 PPP1R15AO75807 674 aaPredicted RBP23.37■■□□□ 1.33
GFM1-208ENST00000478576 GCC2Q8IWJ2 1684 aa23.33■■□□□ 1.33
GFM1-208ENST00000478576 EPRSP07814 1512 aaKnown RBP23.32■■□□□ 1.32
GFM1-208ENST00000478576 WDR62O43379 1518 aa23.32■■□□□ 1.32
GFM1-208ENST00000478576 AKNAQ7Z591 1439 aa23.3■■□□□ 1.32
GFM1-208ENST00000478576 IFT140Q96RY7 1462 aa23.29■■□□□ 1.32
GFM1-208ENST00000478576 MIA2Q96PC5 1412 aa23.27■■□□□ 1.32
GFM1-208ENST00000478576 TONSLQ96HA7 1378 aa23.24■■□□□ 1.31
GFM1-208ENST00000478576 CDK13Q14004 1512 aaKnown RBP23.21■■□□□ 1.31
GFM1-208ENST00000478576 KIAA0586Q9BVV6 1533 aa23.21■■□□□ 1.31
GFM1-208ENST00000478576 KDM5BQ9UGL1 1544 aa23.2■■□□□ 1.3
GFM1-208ENST00000478576 KIAA0556O60303 1618 aa23.19■■□□□ 1.3
GFM1-208ENST00000478576 DDX10Q13206 875 aaKnown RBP23.19■■□□□ 1.3
GFM1-208ENST00000478576 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
GFM1-208ENST00000478576 DISP1Q96F81 1524 aa23.16■■□□□ 1.3
GFM1-208ENST00000478576 DENND4BO75064 1496 aaPredicted RBP23.13■■□□□ 1.29
GFM1-208ENST00000478576 EIF4G3O43432 1585 aaKnown RBP23.12■■□□□ 1.29
GFM1-208ENST00000478576 KCNH8Q96L42 1107 aa23.12■■□□□ 1.29
GFM1-208ENST00000478576 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
GFM1-208ENST00000478576 KDM6BO15054 1643 aa23.11■■□□□ 1.29
GFM1-208ENST00000478576 CCER2I3L3R5 266 aa23.11■■□□□ 1.29
GFM1-208ENST00000478576 RAPGEF6Q8TEU7 1601 aa23.11■■□□□ 1.29
GFM1-208ENST00000478576 SUPT16HQ9Y5B9 1047 aaKnown RBP23.09■■□□□ 1.29
GFM1-208ENST00000478576 DNMT1P26358 1616 aaKnown RBP23.08■■□□□ 1.29
GFM1-208ENST00000478576 NUP153P49790 1475 aaKnown RBP23.08■■□□□ 1.29
GFM1-208ENST00000478576 ROCK1Q13464 1354 aa23.08■■□□□ 1.28
GFM1-208ENST00000478576 RRP7BPQ9NSQ0 103 aa23.08■■□□□ 1.28
GFM1-208ENST00000478576 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
GFM1-208ENST00000478576 DAPK1P53355 1430 aa23.04■■□□□ 1.28
GFM1-208ENST00000478576 HIRIP3Q9BW71 556 aaPredicted RBP23.03■■□□□ 1.28
GFM1-208ENST00000478576 CHIC2Q9UKJ5 165 aa23.03■■□□□ 1.28
GFM1-208ENST00000478576 ANP32CO43423 234 aa23.02■■□□□ 1.28
GFM1-208ENST00000478576 ABCC5O15440 1437 aa22.99■■□□□ 1.27
GFM1-208ENST00000478576 MPHOSPH9Q99550 1183 aa22.97■■□□□ 1.27
GFM1-208ENST00000478576 ADCY10Q96PN6 1610 aa22.97■■□□□ 1.27
GFM1-208ENST00000478576 CEP170Q5SW79 1584 aa22.96■■□□□ 1.27
GFM1-208ENST00000478576 ITSN2Q9NZM3 1697 aa22.96■■□□□ 1.27
GFM1-208ENST00000478576 TRIM52Q96A61 297 aa22.96■■□□□ 1.27
GFM1-208ENST00000478576 CDK11AQ9UQ88 783 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms