RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 AQRO60306 1485 aaKnown RBP eCLIP30.88■■■□□ 2.533e-7■■■■■ 28
TMED4-204ENST00000477639 TDRD9Q8NDG6 1382 aaKnown RBP30.83■■■□□ 2.53
TMED4-204ENST00000477639 RRBP1Q9P2E9 1410 aaKnown RBP30.83■■■□□ 2.53
TMED4-204ENST00000477639 ZNF316A6NFI3 1004 aaPredicted RBP30.82■■■□□ 2.52
TMED4-204ENST00000477639 ABCA10Q8WWZ4 1543 aa30.77■■■□□ 2.52
TMED4-204ENST00000477639 WDR97A6NE52 1622 aa30.74■■■□□ 2.51
TMED4-204ENST00000477639 MAP3K1Q13233 1512 aa30.73■■■□□ 2.51
TMED4-204ENST00000477639 CLSPNQ9HAW4 1339 aa30.67■■■□□ 2.5
TMED4-204ENST00000477639 TIAM1Q13009 1591 aa30.66■■■□□ 2.5
TMED4-204ENST00000477639 DHX57Q6P158 1386 aaKnown RBP30.66■■■□□ 2.5
TMED4-204ENST00000477639 CCNB3Q8WWL7 1395 aa30.66■■■□□ 2.5
TMED4-204ENST00000477639 SCAF1Q9H7N4 1312 aaKnown RBP30.63■■■□□ 2.49
TMED4-204ENST00000477639 OSCARQ8IYS5 282 aa30.61■■■□□ 2.49
TMED4-204ENST00000477639 GAPVD1Q14C86 1478 aa30.61■■■□□ 2.49
TMED4-204ENST00000477639 FBLN2P98095 1184 aa30.59■■■□□ 2.49
TMED4-204ENST00000477639 GRIN2BQ13224 1484 aa30.58■■■□□ 2.49
TMED4-204ENST00000477639 SNAPC4Q5SXM2 1469 aa30.58■■■□□ 2.49
TMED4-204ENST00000477639 CUL7Q14999 1698 aa30.57■■■□□ 2.48
TMED4-204ENST00000477639 ABCA5Q8WWZ7 1642 aa30.57■■■□□ 2.48
TMED4-204ENST00000477639 FHAD1B1AJZ9 1412 aa30.57■■■□□ 2.48
TMED4-204ENST00000477639 PBRM1Q86U86 1689 aa30.56■■■□□ 2.48
TMED4-204ENST00000477639 CHD1O14646 1710 aa30.54■■■□□ 2.48
TMED4-204ENST00000477639 LRRC9Q6ZRR7 1453 aa30.54■■■□□ 2.48
TMED4-204ENST00000477639 ACIN1Q9UKV3 1341 aaKnown RBP30.51■■■□□ 2.47
TMED4-204ENST00000477639 MAGI1Q96QZ7 1491 aaPredicted RBP30.48■■■□□ 2.47
TMED4-204ENST00000477639 EFCAB5A4FU69 1503 aa30.48■■■□□ 2.47
TMED4-204ENST00000477639 PCF11O94913 1555 aaKnown RBP30.48■■■□□ 2.47
TMED4-204ENST00000477639 CFAP43Q8NDM7 1665 aa30.47■■■□□ 2.47
TMED4-204ENST00000477639 NEUROD1Q13562 356 aa30.43■■■□□ 2.46
TMED4-204ENST00000477639 P3H3Q8IVL6 736 aa30.43■■■□□ 2.46
TMED4-204ENST00000477639 CHMP7Q8WUX9 453 aaPredicted RBP30.43■■■□□ 2.46
TMED4-204ENST00000477639 CTTNBP2Q8WZ74 1663 aa30.43■■■□□ 2.46
TMED4-204ENST00000477639 FHOD3Q2V2M9 1422 aa30.42■■■□□ 2.46
TMED4-204ENST00000477639 PHLDB1Q86UU1 1377 aa30.4■■■□□ 2.46
TMED4-204ENST00000477639 FYCO1Q9BQS8 1478 aa30.39■■■□□ 2.45
TMED4-204ENST00000477639 SYNJ2O15056 1496 aa30.38■■■□□ 2.45
TMED4-204ENST00000477639 CASKIN1Q8WXD9 1431 aa30.37■■■□□ 2.45
TMED4-204ENST00000477639 CENPBP07199 599 aaPredicted RBP30.36■■■□□ 2.45
TMED4-204ENST00000477639 ITGAEP38570 1179 aa30.35■■■□□ 2.45
TMED4-204ENST00000477639 RAB3GAP2Q9H2M9 1393 aa30.3■■■□□ 2.44
TMED4-204ENST00000477639 ADAMTS12P58397 1594 aa30.29■■■□□ 2.44
TMED4-204ENST00000477639 MIER1Q8N108 512 aa30.27■■■□□ 2.44
TMED4-204ENST00000477639 FMN1Q68DA7 1419 aa30.25■■■□□ 2.43
TMED4-204ENST00000477639 SETD5Q9C0A6 1442 aa30.25■■■□□ 2.43
TMED4-204ENST00000477639 ATP1B4Q9UN42 357 aaPredicted RBP30.24■■■□□ 2.43
TMED4-204ENST00000477639 SAMD9Q5K651 1589 aa30.22■■■□□ 2.43
TMED4-204ENST00000477639 GRIN2AQ12879 1464 aa30.2■■■□□ 2.42
TMED4-204ENST00000477639 MAPKBP1O60336 1514 aa30.18■■■□□ 2.42
TMED4-204ENST00000477639 FAM50AQ14320 339 aaKnown RBP30.17■■■□□ 2.42
TMED4-204ENST00000477639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.17■■■□□ 2.426e-7■■□□□ 11.8
TMED4-204ENST00000477639 CLASP1Q7Z460 1538 aa30.14■■■□□ 2.42
TMED4-204ENST00000477639 RIMBP3CA6NJZ7 1639 aa30.13■■■□□ 2.41
TMED4-204ENST00000477639 RIMBP3BA6NNM3 1639 aa30.13■■■□□ 2.41
TMED4-204ENST00000477639 RIMBP3Q9UFD9 1639 aa30.13■■■□□ 2.41
TMED4-204ENST00000477639 ARHGEF11O15085 1522 aa30.12■■■□□ 2.41
TMED4-204ENST00000477639 CEP170Q5SW79 1584 aa30.07■■■□□ 2.4
TMED4-204ENST00000477639 GTF3C3Q9Y5Q9 886 aa30.06■■■□□ 2.4
TMED4-204ENST00000477639 LRRIQ1Q96JM4 1722 aa30.04■■■□□ 2.4
TMED4-204ENST00000477639 NUP160Q12769 1436 aa30.03■■■□□ 2.4
TMED4-204ENST00000477639 FGD6Q6ZV73 1430 aa30.03■■■□□ 2.4
TMED4-204ENST00000477639 MTUS2Q5JR59 1369 aa30■■■□□ 2.39
TMED4-204ENST00000477639 YTHDC1Q96MU7 727 aaKnown RBP29.99■■■□□ 2.39
TMED4-204ENST00000477639 NCOA2Q15596 1464 aa29.91■■■□□ 2.38
TMED4-204ENST00000477639 CYB5RLQ6IPT4 315 aa29.9■■■□□ 2.38
TMED4-204ENST00000477639 EHBP1L1Q8N3D4 1523 aa29.89■■■□□ 2.38
TMED4-204ENST00000477639 MYOM3Q5VTT5 1437 aa29.87■■■□□ 2.37
TMED4-204ENST00000477639 SUPT6HQ7KZ85 1726 aaKnown RBP29.87■■■□□ 2.37
TMED4-204ENST00000477639 SIN3AQ96ST3 1273 aa29.86■■■□□ 2.37
TMED4-204ENST00000477639 IQGAP2Q13576 1575 aa29.86■■■□□ 2.37
TMED4-204ENST00000477639 PTPRKQ15262 1439 aa29.85■■■□□ 2.37
TMED4-204ENST00000477639 TIMELESSQ9UNS1 1208 aa29.84■■■□□ 2.37
TMED4-204ENST00000477639 CCDC18Q5T9S5 1454 aa29.84■■■□□ 2.37
TMED4-204ENST00000477639 MAGI3Q5TCQ9 1506 aa29.82■■■□□ 2.36
TMED4-204ENST00000477639 UGGT2Q9NYU1 1516 aa29.82■■■□□ 2.36
TMED4-204ENST00000477639 HFM1A2PYH4 1435 aa29.81■■■□□ 2.36
TMED4-204ENST00000477639 ERCC6L2Q5T890 1561 aa29.81■■■□□ 2.36
TMED4-204ENST00000477639 SHROOM2Q13796 1616 aa29.8■■■□□ 2.36
TMED4-204ENST00000477639 HECW1Q76N89 1606 aa29.78■■■□□ 2.36
TMED4-204ENST00000477639 JPH4Q96JJ6 628 aa29.78■■■□□ 2.36
TMED4-204ENST00000477639 PTPN23Q9H3S7 1636 aa29.76■■■□□ 2.35
TMED4-204ENST00000477639 KIAA0586Q9BVV6 1533 aa29.76■■■□□ 2.35
TMED4-204ENST00000477639 PELP1Q8IZL8 1130 aaKnown RBP29.73■■■□□ 2.35
TMED4-204ENST00000477639 PRG4Q92954 1404 aaPredicted RBP29.73■■■□□ 2.35
TMED4-204ENST00000477639 NAIPQ13075 1403 aa29.72■■■□□ 2.35
TMED4-204ENST00000477639 EPRSP07814 1512 aaKnown RBP29.71■■■□□ 2.35
TMED4-204ENST00000477639 UACAQ9BZF9 1416 aa29.71■■■□□ 2.35
TMED4-204ENST00000477639 TCOF1Q13428 1488 aaKnown RBP29.7■■■□□ 2.34
TMED4-204ENST00000477639 PPP1R15AO75807 674 aaPredicted RBP29.67■■■□□ 2.34
TMED4-204ENST00000477639 CDK13Q14004 1512 aaKnown RBP29.62■■■□□ 2.33
TMED4-204ENST00000477639 DISP1Q96F81 1524 aa29.57■■■□□ 2.32
TMED4-204ENST00000477639 MIA2Q96PC5 1412 aa29.57■■■□□ 2.32
TMED4-204ENST00000477639 KIAA0556O60303 1618 aa29.56■■■□□ 2.32
TMED4-204ENST00000477639 AKNAQ7Z591 1439 aa29.53■■■□□ 2.32
TMED4-204ENST00000477639 GCC2Q8IWJ2 1684 aa29.51■■■□□ 2.32
TMED4-204ENST00000477639 TONSLQ96HA7 1378 aa29.51■■■□□ 2.31
TMED4-204ENST00000477639 RRP7BPQ9NSQ0 103 aa29.47■■■□□ 2.31
TMED4-204ENST00000477639 CARMIL2Q6F5E8 1435 aa29.46■■■□□ 2.31
TMED4-204ENST00000477639 DDX10Q13206 875 aaKnown RBP29.44■■■□□ 2.3
TMED4-204ENST00000477639 CHIC2Q9UKJ5 165 aa29.44■■■□□ 2.3
TMED4-204ENST00000477639 NUP153P49790 1475 aaKnown RBP29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms