RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 GOLGA3Q08378 1498 aa15.25■□□□□ 0.03
PGK1-204ENST00000477335 GRIN2AQ12879 1464 aa15.21■□□□□ 0.03
PGK1-204ENST00000477335 CHD1O14646 1710 aa15.2■□□□□ 0.02
PGK1-204ENST00000477335 CEP170Q5SW79 1584 aa15.17■□□□□ 0.02
PGK1-204ENST00000477335 FBLN2P98095 1184 aa15.17■□□□□ 0.02
PGK1-204ENST00000477335 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
PGK1-204ENST00000477335 NUP160Q12769 1436 aa15.15■□□□□ 0.02
PGK1-204ENST00000477335 TNIKQ9UKE5 1360 aa15.13■□□□□ 0.01
PGK1-204ENST00000477335 UBTFP17480 764 aaKnown RBP15.13■□□□□ 0.01
PGK1-204ENST00000477335 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
PGK1-204ENST00000477335 KIAA0586Q9BVV6 1533 aa15.07■□□□□ 0
PGK1-204ENST00000477335 CLASP1Q7Z460 1538 aa15.07■□□□□ 0
PGK1-204ENST00000477335 IQGAP2Q13576 1575 aa15.05■□□□□ -0
PGK1-204ENST00000477335 CEP162Q5TB80 1403 aa15.04■□□□□ -0
PGK1-204ENST00000477335 RANGAP1P46060 587 aaPredicted RBP15.02■□□□□ -0
PGK1-204ENST00000477335 UGGT2Q9NYU1 1516 aa15□□□□□ -0.01
PGK1-204ENST00000477335 ARHGAP35Q9NRY4 1499 aa14.99□□□□□ -0.01
PGK1-204ENST00000477335 CLIP1P30622 1438 aa14.99□□□□□ -0.01
PGK1-204ENST00000477335 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
PGK1-204ENST00000477335 SHROOM2Q13796 1616 aa14.98□□□□□ -0.01
PGK1-204ENST00000477335 DISP1Q96F81 1524 aa14.97□□□□□ -0.01
PGK1-204ENST00000477335 SAMD9Q5K651 1589 aa14.97□□□□□ -0.01
PGK1-204ENST00000477335 JPH4Q96JJ6 628 aa14.96□□□□□ -0.01
PGK1-204ENST00000477335 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
PGK1-204ENST00000477335 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
PGK1-204ENST00000477335 FHOD3Q2V2M9 1422 aa14.92□□□□□ -0.02
PGK1-204ENST00000477335 EFCAB5A4FU69 1503 aa14.92□□□□□ -0.02
PGK1-204ENST00000477335 KIAA0556O60303 1618 aa14.92□□□□□ -0.02
PGK1-204ENST00000477335 MSH5O43196 834 aa14.92□□□□□ -0.02
PGK1-204ENST00000477335 P3H3Q8IVL6 736 aa14.92□□□□□ -0.02
PGK1-204ENST00000477335 PRG4Q92954 1404 aaPredicted RBP14.92□□□□□ -0.02
PGK1-204ENST00000477335 CARMIL2Q6F5E8 1435 aa14.83□□□□□ -0.03
PGK1-204ENST00000477335 VPS8Q8N3P4 1428 aa14.81□□□□□ -0.04
PGK1-204ENST00000477335 TTBK1Q5TCY1 1321 aaPredicted RBP14.8□□□□□ -0.04
PGK1-204ENST00000477335 ARHGEF11O15085 1522 aa14.8□□□□□ -0.04
PGK1-204ENST00000477335 PCF11O94913 1555 aaKnown RBP14.79□□□□□ -0.04
PGK1-204ENST00000477335 PTPRGP23470 1445 aa14.77□□□□□ -0.04
PGK1-204ENST00000477335 RIMBP3CA6NJZ7 1639 aa14.77□□□□□ -0.05
PGK1-204ENST00000477335 RIMBP3BA6NNM3 1639 aa14.77□□□□□ -0.05
PGK1-204ENST00000477335 RIMBP3Q9UFD9 1639 aa14.77□□□□□ -0.05
PGK1-204ENST00000477335 PLB1Q6P1J6 1458 aa14.76□□□□□ -0.05
PGK1-204ENST00000477335 FMN1Q68DA7 1419 aa14.75□□□□□ -0.05
PGK1-204ENST00000477335 ABCA8O94911 1581 aa14.75□□□□□ -0.05
PGK1-204ENST00000477335 CASKIN1Q8WXD9 1431 aa14.75□□□□□ -0.05
PGK1-204ENST00000477335 RAPGEF6Q8TEU7 1601 aa14.72□□□□□ -0.05
PGK1-204ENST00000477335 NUP153P49790 1475 aaKnown RBP14.71□□□□□ -0.05
PGK1-204ENST00000477335 FYCO1Q9BQS8 1478 aa14.71□□□□□ -0.05
PGK1-204ENST00000477335 LRRIQ1Q96JM4 1722 aa14.71□□□□□ -0.05
PGK1-204ENST00000477335 UACAQ9BZF9 1416 aa14.69□□□□□ -0.06
PGK1-204ENST00000477335 CDK13Q14004 1512 aaKnown RBP14.67□□□□□ -0.06
PGK1-204ENST00000477335 HECW1Q76N89 1606 aa14.67□□□□□ -0.06
PGK1-204ENST00000477335 ADCY10Q96PN6 1610 aa14.67□□□□□ -0.06
PGK1-204ENST00000477335 ARID3CA6NKF2 412 aa14.67□□□□□ -0.06
PGK1-204ENST00000477335 ABCC2Q92887 1545 aa14.66□□□□□ -0.06
PGK1-204ENST00000477335 UHRF1BP1LA0JNW5 1464 aa14.66□□□□□ -0.06
PGK1-204ENST00000477335 ATP1B4Q9UN42 357 aaPredicted RBP14.65□□□□□ -0.06
PGK1-204ENST00000477335 EPRSP07814 1512 aaKnown RBP14.65□□□□□ -0.06
PGK1-204ENST00000477335 ATP10BO94823 1461 aa14.63□□□□□ -0.07
PGK1-204ENST00000477335 CFAP43Q8NDM7 1665 aa14.63□□□□□ -0.07
PGK1-204ENST00000477335 DNAJC5Q9H3Z4 198 aa14.63□□□□□ -0.07
PGK1-204ENST00000477335 TIAM1Q13009 1591 aa14.63□□□□□ -0.07
PGK1-204ENST00000477335 MAGI3Q5TCQ9 1506 aa14.62□□□□□ -0.07
PGK1-204ENST00000477335 CYB5RLQ6IPT4 315 aa14.62□□□□□ -0.07
PGK1-204ENST00000477335 KANK4Q5T7N3 995 aaPredicted RBP14.61□□□□□ -0.07
PGK1-204ENST00000477335 PPARGC1BQ86YN6 1023 aaKnown RBP14.6□□□□□ -0.07
PGK1-204ENST00000477335 MAP3K1Q13233 1512 aa14.6□□□□□ -0.07
PGK1-204ENST00000477335 KDM5BQ9UGL1 1544 aa14.6□□□□□ -0.07
PGK1-204ENST00000477335 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
PGK1-204ENST00000477335 ZCCHC11Q5TAX3 1644 aaKnown RBP14.59□□□□□ -0.07
PGK1-204ENST00000477335 LRRC9Q6ZRR7 1453 aa14.57□□□□□ -0.08
PGK1-204ENST00000477335 APLP2Q06481 763 aa14.51□□□□□ -0.09
PGK1-204ENST00000477335 EHBP1L1Q8N3D4 1523 aa14.51□□□□□ -0.09
PGK1-204ENST00000477335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
PGK1-204ENST00000477335 HNRNPUL2Q1KMD3 747 aaKnown RBP14.5□□□□□ -0.09
PGK1-204ENST00000477335 TROQ12816 1431 aaPredicted RBP14.49□□□□□ -0.09
PGK1-204ENST00000477335 KIF14Q15058 1648 aa14.48□□□□□ -0.09
PGK1-204ENST00000477335 MTUS2Q5JR59 1369 aa14.48□□□□□ -0.09
PGK1-204ENST00000477335 ASXL2Q76L83 1435 aa14.48□□□□□ -0.09
PGK1-204ENST00000477335 WDR7Q9Y4E6 1490 aa14.46□□□□□ -0.09
PGK1-204ENST00000477335 NCOA2Q15596 1464 aa14.45□□□□□ -0.1
PGK1-204ENST00000477335 PLEKHD1A6NEE1 506 aa14.45□□□□□ -0.1
PGK1-204ENST00000477335 MAPKBP1O60336 1514 aa14.45□□□□□ -0.1
PGK1-204ENST00000477335 PHLDB1Q86UU1 1377 aa14.44□□□□□ -0.1
PGK1-204ENST00000477335 ABCC10Q5T3U5 1492 aa14.44□□□□□ -0.1
PGK1-204ENST00000477335 CDK11AQ9UQ88 783 aaPredicted RBP14.43□□□□□ -0.1
PGK1-204ENST00000477335 SUPT6HQ7KZ85 1726 aaKnown RBP14.42□□□□□ -0.1
PGK1-204ENST00000477335 NPM1P06748 294 aaKnown RBP eCLIP14.42□□□□□ -0.1
PGK1-204ENST00000477335 TTC37Q6PGP7 1564 aa14.41□□□□□ -0.1
PGK1-204ENST00000477335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.41□□□□□ -0.14e-10■■□□□ 11.9
PGK1-204ENST00000477335 KCNH8Q96L42 1107 aa14.4□□□□□ -0.1
PGK1-204ENST00000477335 PPP4R3CPQ6ZMV5 832 aa14.38□□□□□ -0.11
PGK1-204ENST00000477335 GPATCH8Q9UKJ3 1502 aaKnown RBP14.36□□□□□ -0.11
PGK1-204ENST00000477335 DIP2BQ9P265 1576 aa14.35□□□□□ -0.11
PGK1-204ENST00000477335 MYOM3Q5VTT5 1437 aa14.35□□□□□ -0.11
PGK1-204ENST00000477335 ABCA9Q8IUA7 1624 aa14.35□□□□□ -0.11
PGK1-204ENST00000477335 CDC42BPAQ5VT25 1732 aa14.34□□□□□ -0.11
PGK1-204ENST00000477335 CCNB3Q8WWL7 1395 aa14.34□□□□□ -0.11
PGK1-204ENST00000477335 FGD6Q6ZV73 1430 aa14.33□□□□□ -0.11
PGK1-204ENST00000477335 RRBP1Q9P2E9 1410 aaKnown RBP14.32□□□□□ -0.12
PGK1-204ENST00000477335 GLI2P10070 1586 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms