RNA–Protein interactions for RNA: ENST00000476916.5

KPNA1-206, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-206ENST00000476916 PRKCSHP14314 528 aaPredicted RBP14.61□□□□□ -0.07
KPNA1-206ENST00000476916 SPATA31D1Q6ZQQ2 1576 aa14.6□□□□□ -0.07
KPNA1-206ENST00000476916 CHD1O14646 1710 aa14.59□□□□□ -0.07
KPNA1-206ENST00000476916 VASPP50552 380 aaPredicted RBP14.58□□□□□ -0.08
KPNA1-206ENST00000476916 CADPSQ9ULU8 1353 aa14.58□□□□□ -0.08
KPNA1-206ENST00000476916 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
KPNA1-206ENST00000476916 BAZ1BQ9UIG0 1483 aaKnown RBP14.56□□□□□ -0.08
KPNA1-206ENST00000476916 TAOK2Q9UL54 1235 aa14.55□□□□□ -0.08
KPNA1-206ENST00000476916 ZNF608Q9ULD9 1512 aaPredicted RBP14.54□□□□□ -0.08
KPNA1-206ENST00000476916 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
KPNA1-206ENST00000476916 KIF13AQ9H1H9 1805 aa14.54□□□□□ -0.08
KPNA1-206ENST00000476916 FBLN2P98095 1184 aa14.53□□□□□ -0.08
KPNA1-206ENST00000476916 ADGRL1O94910 1474 aa14.52□□□□□ -0.08
KPNA1-206ENST00000476916 VSIG10Q8N0Z9 540 aa14.48□□□□□ -0.09
KPNA1-206ENST00000476916 ZCCHC6Q5VYS8 1495 aaKnown RBP14.46□□□□□ -0.09
KPNA1-206ENST00000476916 IFNLR1Q8IU57 520 aaPredicted RBP14.46□□□□□ -0.09
KPNA1-206ENST00000476916 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
KPNA1-206ENST00000476916 KDM6BO15054 1643 aa14.41□□□□□ -0.1
KPNA1-206ENST00000476916 POLA2Q14181 598 aa14.41□□□□□ -0.1
KPNA1-206ENST00000476916 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
KPNA1-206ENST00000476916 CLASP1Q7Z460 1538 aa14.41□□□□□ -0.1
KPNA1-206ENST00000476916 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
KPNA1-206ENST00000476916 GAPVD1Q14C86 1478 aa14.38□□□□□ -0.11
KPNA1-206ENST00000476916 IFT140Q96RY7 1462 aa14.36□□□□□ -0.11
KPNA1-206ENST00000476916 EIF4G3O43432 1585 aaKnown RBP14.35□□□□□ -0.11
KPNA1-206ENST00000476916 PKD2Q13563 968 aa14.33□□□□□ -0.12
KPNA1-206ENST00000476916 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
KPNA1-206ENST00000476916 CAPN15O75808 1086 aa14.26□□□□□ -0.13
KPNA1-206ENST00000476916 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
KPNA1-206ENST00000476916 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
KPNA1-206ENST00000476916 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
KPNA1-206ENST00000476916 CERKQ8TCT0 537 aa14.23□□□□□ -0.13
KPNA1-206ENST00000476916 FAM69CQ0P6D2 419 aa14.21□□□□□ -0.13
KPNA1-206ENST00000476916 SYNJ1O43426 1573 aa14.18□□□□□ -0.14
KPNA1-206ENST00000476916 KDM2AQ9Y2K7 1162 aa14.18□□□□□ -0.14
KPNA1-206ENST00000476916 ABCC10Q5T3U5 1492 aa14.18□□□□□ -0.14
KPNA1-206ENST00000476916 AQRO60306 1485 aaKnown RBP eCLIP14.17□□□□□ -0.146e-7■□□□□ 10.8
KPNA1-206ENST00000476916 C1QBPQ07021 282 aaKnown RBP14.14□□□□□ -0.15
KPNA1-206ENST00000476916 SPOCK2Q92563 424 aa14.12□□□□□ -0.15
KPNA1-206ENST00000476916 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.11□□□□□ -0.15
KPNA1-206ENST00000476916 BBXQ8WY36 941 aaPredicted RBP14.1□□□□□ -0.15
KPNA1-206ENST00000476916 DIP2BQ9P265 1576 aa14.09□□□□□ -0.15
KPNA1-206ENST00000476916 ABCB7O75027 752 aa14.07□□□□□ -0.16
KPNA1-206ENST00000476916 KLHL34Q8N239 644 aa14.07□□□□□ -0.16
KPNA1-206ENST00000476916 STAG3Q9UJ98 1225 aa14.06□□□□□ -0.16
KPNA1-206ENST00000476916 TSPOAP1O95153 1857 aa14.06□□□□□ -0.16
KPNA1-206ENST00000476916 CFTRP13569 1480 aa14.05□□□□□ -0.16
KPNA1-206ENST00000476916 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
KPNA1-206ENST00000476916 ECM2O94769 699 aaPredicted RBP14.03□□□□□ -0.16
KPNA1-206ENST00000476916 PAXIP1Q6ZW49 1069 aaPredicted RBP14.01□□□□□ -0.17
KPNA1-206ENST00000476916 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
KPNA1-206ENST00000476916 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
KPNA1-206ENST00000476916 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
KPNA1-206ENST00000476916 TARBP1Q13395 1621 aaKnown RBP13.98□□□□□ -0.17
KPNA1-206ENST00000476916 SNAPC4Q5SXM2 1469 aa13.96□□□□□ -0.17
KPNA1-206ENST00000476916 CFAP44Q96MT7 982 aa13.96□□□□□ -0.17
KPNA1-206ENST00000476916 SSUH2Q9Y2M2 353 aa13.96□□□□□ -0.17
KPNA1-206ENST00000476916 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
KPNA1-206ENST00000476916 SPDYE2BA6NHP3 402 aa13.95□□□□□ -0.18
KPNA1-206ENST00000476916 SPDYE6P0CI01 402 aa13.95□□□□□ -0.18
KPNA1-206ENST00000476916 SPDYE2Q495Y8 402 aa13.95□□□□□ -0.18
KPNA1-206ENST00000476916 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
KPNA1-206ENST00000476916 PCF11O94913 1555 aaKnown RBP13.92□□□□□ -0.18
KPNA1-206ENST00000476916 PLCD3Q8N3E9 789 aa13.92□□□□□ -0.18
KPNA1-206ENST00000476916 MROH2BQ7Z745 1585 aa13.92□□□□□ -0.18
KPNA1-206ENST00000476916 RGL2O15211 777 aa13.9□□□□□ -0.18
KPNA1-206ENST00000476916 DSG3P32926 999 aa13.88□□□□□ -0.19
KPNA1-206ENST00000476916 TIMELESSQ9UNS1 1208 aa13.87□□□□□ -0.19
KPNA1-206ENST00000476916 MIER1Q8N108 512 aa13.85□□□□□ -0.19
KPNA1-206ENST00000476916 MAGI1Q96QZ7 1491 aaPredicted RBP13.85□□□□□ -0.19
KPNA1-206ENST00000476916 COL17A1Q9UMD9 1497 aaPredicted RBP13.85□□□□□ -0.19
KPNA1-206ENST00000476916 SPRYD3Q8NCJ5 442 aa13.83□□□□□ -0.2
KPNA1-206ENST00000476916 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
KPNA1-206ENST00000476916 CEP170Q5SW79 1584 aa13.82□□□□□ -0.2
KPNA1-206ENST00000476916 PPRC1Q5VV67 1664 aaKnown RBP13.79□□□□□ -0.2
KPNA1-206ENST00000476916 TULP1O00294 542 aaPredicted RBP13.79□□□□□ -0.2
KPNA1-206ENST00000476916 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
KPNA1-206ENST00000476916 PTPRMP28827 1452 aa13.79□□□□□ -0.2
KPNA1-206ENST00000476916 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
KPNA1-206ENST00000476916 DAXXQ9UER7 740 aaPredicted RBP13.76□□□□□ -0.21
KPNA1-206ENST00000476916 ARXQ96QS3 562 aa13.75□□□□□ -0.21
KPNA1-206ENST00000476916 MED1Q15648 1581 aaPredicted RBP13.75□□□□□ -0.21
KPNA1-206ENST00000476916 PRDM2Q13029 1718 aa13.74□□□□□ -0.21
KPNA1-206ENST00000476916 HSPA2P54652 639 aa13.73□□□□□ -0.21
KPNA1-206ENST00000476916 ZBTB47Q9UFB7 747 aaPredicted RBP13.73□□□□□ -0.21
KPNA1-206ENST00000476916 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
KPNA1-206ENST00000476916 DNMBPQ6XZF7 1577 aa13.73□□□□□ -0.21
KPNA1-206ENST00000476916 NBR1Q14596 966 aa13.72□□□□□ -0.21
KPNA1-206ENST00000476916 CIZ1Q9ULV3 898 aaPredicted RBP13.71□□□□□ -0.21
KPNA1-206ENST00000476916 ERICH6Q7L0X2 663 aa13.7□□□□□ -0.22
KPNA1-206ENST00000476916 SHROOM2Q13796 1616 aa13.69□□□□□ -0.22
KPNA1-206ENST00000476916 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
KPNA1-206ENST00000476916 CHGAP10645 457 aaKnown RBP13.69□□□□□ -0.22
KPNA1-206ENST00000476916 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
KPNA1-206ENST00000476916 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
KPNA1-206ENST00000476916 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
KPNA1-206ENST00000476916 GRIN2BQ13224 1484 aa13.66□□□□□ -0.22
KPNA1-206ENST00000476916 ADCY10Q96PN6 1610 aa13.64□□□□□ -0.23
KPNA1-206ENST00000476916 SRCAPQ6ZRS2 3230 aa13.64□□□□□ -0.23
KPNA1-206ENST00000476916 ADAMTSL3P82987 1691 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms