RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
HLA-DMA-207ENST00000475627 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
HLA-DMA-207ENST00000475627 IGF1RP08069 1367 aa13.33□□□□□ -0.27
HLA-DMA-207ENST00000475627 ADAMTS12P58397 1594 aa13.33□□□□□ -0.28
HLA-DMA-207ENST00000475627 SYNJ2O15056 1496 aa13.33□□□□□ -0.28
HLA-DMA-207ENST00000475627 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
HLA-DMA-207ENST00000475627 RAPGEF2Q9Y4G8 1499 aa13.3□□□□□ -0.28
HLA-DMA-207ENST00000475627 RUSC2Q8N2Y8 1516 aa13.3□□□□□ -0.28
HLA-DMA-207ENST00000475627 FAM9AQ8IZU1 332 aaPredicted RBP13.3□□□□□ -0.28
HLA-DMA-207ENST00000475627 KIF21BO75037 1637 aa13.29□□□□□ -0.28
HLA-DMA-207ENST00000475627 CHMP7Q8WUX9 453 aaPredicted RBP13.29□□□□□ -0.28
HLA-DMA-207ENST00000475627 PRXQ9BXM0 1461 aa13.28□□□□□ -0.28
HLA-DMA-207ENST00000475627 GOLGA3Q08378 1498 aa13.26□□□□□ -0.29
HLA-DMA-207ENST00000475627 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
HLA-DMA-207ENST00000475627 FBLN2P98095 1184 aa13.25□□□□□ -0.29
HLA-DMA-207ENST00000475627 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
HLA-DMA-207ENST00000475627 CHD1O14646 1710 aa13.21□□□□□ -0.3
HLA-DMA-207ENST00000475627 FKBP8Q14318 412 aa13.18□□□□□ -0.3
HLA-DMA-207ENST00000475627 NUP160Q12769 1436 aa13.17□□□□□ -0.3
HLA-DMA-207ENST00000475627 UBTFP17480 764 aaKnown RBP13.17□□□□□ -0.3
HLA-DMA-207ENST00000475627 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
HLA-DMA-207ENST00000475627 CTTNBP2Q8WZ74 1663 aa13.15□□□□□ -0.3
HLA-DMA-207ENST00000475627 KIAA0586Q9BVV6 1533 aa13.15□□□□□ -0.3
HLA-DMA-207ENST00000475627 IQGAP2Q13576 1575 aa13.13□□□□□ -0.31
HLA-DMA-207ENST00000475627 CEP170Q5SW79 1584 aa13.12□□□□□ -0.31
HLA-DMA-207ENST00000475627 TNIKQ9UKE5 1360 aa13.11□□□□□ -0.31
HLA-DMA-207ENST00000475627 CLASP1Q7Z460 1538 aa13.09□□□□□ -0.31
HLA-DMA-207ENST00000475627 CACNB1Q02641 598 aaPredicted RBP13.08□□□□□ -0.32
HLA-DMA-207ENST00000475627 CARMIL2Q6F5E8 1435 aa13.07□□□□□ -0.32
HLA-DMA-207ENST00000475627 EFCAB5A4FU69 1503 aa13.06□□□□□ -0.32
HLA-DMA-207ENST00000475627 UGGT2Q9NYU1 1516 aa13.05□□□□□ -0.32
HLA-DMA-207ENST00000475627 JPH4Q96JJ6 628 aa13.03□□□□□ -0.32
HLA-DMA-207ENST00000475627 SHROOM2Q13796 1616 aa13.02□□□□□ -0.32
HLA-DMA-207ENST00000475627 CLIP1P30622 1438 aa13□□□□□ -0.33
HLA-DMA-207ENST00000475627 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
HLA-DMA-207ENST00000475627 PRG4Q92954 1404 aaPredicted RBP12.99□□□□□ -0.33
HLA-DMA-207ENST00000475627 LOC105371045A0A1W2PR82 267 aa12.99□□□□□ -0.33
HLA-DMA-207ENST00000475627 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
HLA-DMA-207ENST00000475627 DMRT2Q9Y5R5 561 aa12.98□□□□□ -0.33
HLA-DMA-207ENST00000475627 SAMD9Q5K651 1589 aa12.98□□□□□ -0.33
HLA-DMA-207ENST00000475627 KIAA0556O60303 1618 aa12.97□□□□□ -0.33
HLA-DMA-207ENST00000475627 PRKCSHP14314 528 aaPredicted RBP12.94□□□□□ -0.34
HLA-DMA-207ENST00000475627 RANGAP1P46060 587 aaPredicted RBP12.94□□□□□ -0.34
HLA-DMA-207ENST00000475627 FMN1Q68DA7 1419 aa12.94□□□□□ -0.34
HLA-DMA-207ENST00000475627 DISP1Q96F81 1524 aa12.93□□□□□ -0.34
HLA-DMA-207ENST00000475627 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
HLA-DMA-207ENST00000475627 ARHGAP35Q9NRY4 1499 aa12.92□□□□□ -0.34
HLA-DMA-207ENST00000475627 MAPK8IP2Q13387 824 aaPredicted RBP12.91□□□□□ -0.34
HLA-DMA-207ENST00000475627 PTPRGP23470 1445 aa12.9□□□□□ -0.34
HLA-DMA-207ENST00000475627 BCANQ96GW7 911 aa12.9□□□□□ -0.34
HLA-DMA-207ENST00000475627 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
HLA-DMA-207ENST00000475627 FHOD3Q2V2M9 1422 aa12.88□□□□□ -0.35
HLA-DMA-207ENST00000475627 RIMBP3CA6NJZ7 1639 aa12.87□□□□□ -0.35
HLA-DMA-207ENST00000475627 RIMBP3BA6NNM3 1639 aa12.87□□□□□ -0.35
HLA-DMA-207ENST00000475627 RIMBP3Q9UFD9 1639 aa12.87□□□□□ -0.35
HLA-DMA-207ENST00000475627 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
HLA-DMA-207ENST00000475627 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
HLA-DMA-207ENST00000475627 VPS8Q8N3P4 1428 aa12.85□□□□□ -0.35
HLA-DMA-207ENST00000475627 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
HLA-DMA-207ENST00000475627 ATXN8OSP0DMR3 200 aa12.84□□□□□ -0.35
HLA-DMA-207ENST00000475627 ERCC6L2Q5T890 1561 aa12.84□□□□□ -0.35
HLA-DMA-207ENST00000475627 FYCO1Q9BQS8 1478 aa12.84□□□□□ -0.35
HLA-DMA-207ENST00000475627 DNAJC5Q9H3Z4 198 aa12.83□□□□□ -0.36
HLA-DMA-207ENST00000475627 HECW1Q76N89 1606 aa12.83□□□□□ -0.36
HLA-DMA-207ENST00000475627 UACAQ9BZF9 1416 aa12.82□□□□□ -0.36
HLA-DMA-207ENST00000475627 RAPGEF6Q8TEU7 1601 aa12.81□□□□□ -0.36
HLA-DMA-207ENST00000475627 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
HLA-DMA-207ENST00000475627 UHRF1BP1LA0JNW5 1464 aa12.81□□□□□ -0.36
HLA-DMA-207ENST00000475627 TTBK1Q5TCY1 1321 aaPredicted RBP12.81□□□□□ -0.36
HLA-DMA-207ENST00000475627 CCDC18Q5T9S5 1454 aa12.8□□□□□ -0.36
HLA-DMA-207ENST00000475627 ABCC2Q92887 1545 aa12.8□□□□□ -0.36
HLA-DMA-207ENST00000475627 APLP2Q06481 763 aa12.8□□□□□ -0.36
HLA-DMA-207ENST00000475627 ABCA8O94911 1581 aa12.79□□□□□ -0.36
HLA-DMA-207ENST00000475627 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
HLA-DMA-207ENST00000475627 PCF11O94913 1555 aaKnown RBP12.77□□□□□ -0.36
HLA-DMA-207ENST00000475627 PLB1Q6P1J6 1458 aa12.77□□□□□ -0.37
HLA-DMA-207ENST00000475627 CYB5RLQ6IPT4 315 aa12.76□□□□□ -0.37
HLA-DMA-207ENST00000475627 CDK11AQ9UQ88 783 aaPredicted RBP12.76□□□□□ -0.37
HLA-DMA-207ENST00000475627 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
HLA-DMA-207ENST00000475627 ATP1B4Q9UN42 357 aaPredicted RBP12.75□□□□□ -0.37
HLA-DMA-207ENST00000475627 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
HLA-DMA-207ENST00000475627 MAP3K1Q13233 1512 aa12.72□□□□□ -0.37
HLA-DMA-207ENST00000475627 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
HLA-DMA-207ENST00000475627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
HLA-DMA-207ENST00000475627 HNRNPUL2Q1KMD3 747 aaKnown RBP12.72□□□□□ -0.37
HLA-DMA-207ENST00000475627 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
HLA-DMA-207ENST00000475627 KDM5BQ9UGL1 1544 aa12.72□□□□□ -0.37
HLA-DMA-207ENST00000475627 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
HLA-DMA-207ENST00000475627 CFAP43Q8NDM7 1665 aa12.69□□□□□ -0.38
HLA-DMA-207ENST00000475627 ZCCHC11Q5TAX3 1644 aaKnown RBP12.68□□□□□ -0.38
HLA-DMA-207ENST00000475627 PLEKHD1A6NEE1 506 aa12.67□□□□□ -0.38
HLA-DMA-207ENST00000475627 SLC4A2P04920 1241 aa12.67□□□□□ -0.38
HLA-DMA-207ENST00000475627 TIAM1Q13009 1591 aa12.67□□□□□ -0.38
HLA-DMA-207ENST00000475627 MTUS2Q5JR59 1369 aa12.67□□□□□ -0.38
HLA-DMA-207ENST00000475627 MAPKBP1O60336 1514 aa12.67□□□□□ -0.38
HLA-DMA-207ENST00000475627 ATP10BO94823 1461 aa12.66□□□□□ -0.38
HLA-DMA-207ENST00000475627 EHBP1L1Q8N3D4 1523 aa12.66□□□□□ -0.38
HLA-DMA-207ENST00000475627 CDK13Q14004 1512 aaKnown RBP12.65□□□□□ -0.38
HLA-DMA-207ENST00000475627 VSIG10Q8N0Z9 540 aa12.64□□□□□ -0.39
HLA-DMA-207ENST00000475627 WDR7Q9Y4E6 1490 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms