RNA–Protein interactions for RNA: ENST00000475126.5

CSTF2-204, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 1,693 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-204ENST00000475126 CHMP7Q8WUX9 453 aaPredicted RBP19.18■□□□□ 0.66
CSTF2-204ENST00000475126 CLIP1P30622 1438 aa19.15■□□□□ 0.66
CSTF2-204ENST00000475126 CTTNBP2Q8WZ74 1663 aa19.1■□□□□ 0.65
CSTF2-204ENST00000475126 CEP170Q5SW79 1584 aa19.09■□□□□ 0.65
CSTF2-204ENST00000475126 NUP160Q12769 1436 aa19.08■□□□□ 0.65
CSTF2-204ENST00000475126 CHD1O14646 1710 aa19.05■□□□□ 0.64
CSTF2-204ENST00000475126 ARHGAP35Q9NRY4 1499 aa19.05■□□□□ 0.64
CSTF2-204ENST00000475126 KIAA0586Q9BVV6 1533 aa19.05■□□□□ 0.64
CSTF2-204ENST00000475126 IQGAP2Q13576 1575 aa19.05■□□□□ 0.64
CSTF2-204ENST00000475126 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
CSTF2-204ENST00000475126 P3H3Q8IVL6 736 aa18.97■□□□□ 0.63
CSTF2-204ENST00000475126 EFCAB5A4FU69 1503 aa18.97■□□□□ 0.63
CSTF2-204ENST00000475126 FHOD3Q2V2M9 1422 aa18.95■□□□□ 0.62
CSTF2-204ENST00000475126 UGGT2Q9NYU1 1516 aa18.95■□□□□ 0.62
CSTF2-204ENST00000475126 SAMD9Q5K651 1589 aa18.95■□□□□ 0.62
CSTF2-204ENST00000475126 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
CSTF2-204ENST00000475126 DISP1Q96F81 1524 aa18.9■□□□□ 0.62
CSTF2-204ENST00000475126 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
CSTF2-204ENST00000475126 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
CSTF2-204ENST00000475126 KIAA0556O60303 1618 aa18.87■□□□□ 0.61
CSTF2-204ENST00000475126 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
CSTF2-204ENST00000475126 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
CSTF2-204ENST00000475126 OSCARQ8IYS5 282 aa18.8■□□□□ 0.6
CSTF2-204ENST00000475126 FMN1Q68DA7 1419 aa18.8■□□□□ 0.6
CSTF2-204ENST00000475126 CARMIL2Q6F5E8 1435 aa18.8■□□□□ 0.6
CSTF2-204ENST00000475126 PCF11O94913 1555 aaKnown RBP18.79■□□□□ 0.6
CSTF2-204ENST00000475126 TTBK1Q5TCY1 1321 aaPredicted RBP18.79■□□□□ 0.6
CSTF2-204ENST00000475126 ERCC6L2Q5T890 1561 aa18.77■□□□□ 0.6
CSTF2-204ENST00000475126 PPARGC1BQ86YN6 1023 aaKnown RBP18.76■□□□□ 0.59
CSTF2-204ENST00000475126 CASKIN1Q8WXD9 1431 aa18.74■□□□□ 0.59
CSTF2-204ENST00000475126 FYCO1Q9BQS8 1478 aa18.73■□□□□ 0.59
CSTF2-204ENST00000475126 ATP1B4Q9UN42 357 aaPredicted RBP18.71■□□□□ 0.59
CSTF2-204ENST00000475126 APLP2Q06481 763 aa18.68■□□□□ 0.58
CSTF2-204ENST00000475126 PLB1Q6P1J6 1458 aa18.67■□□□□ 0.58
CSTF2-204ENST00000475126 PTPRGP23470 1445 aa18.66■□□□□ 0.58
CSTF2-204ENST00000475126 TIAM1Q13009 1591 aa18.63■□□□□ 0.57
CSTF2-204ENST00000475126 HECW1Q76N89 1606 aa18.63■□□□□ 0.57
CSTF2-204ENST00000475126 KANK4Q5T7N3 995 aaPredicted RBP18.63■□□□□ 0.57
CSTF2-204ENST00000475126 RAPGEF6Q8TEU7 1601 aa18.62■□□□□ 0.57
CSTF2-204ENST00000475126 NUP153P49790 1475 aaKnown RBP18.62■□□□□ 0.57
CSTF2-204ENST00000475126 ARID3CA6NKF2 412 aa18.62■□□□□ 0.57
CSTF2-204ENST00000475126 ABCA8O94911 1581 aa18.6■□□□□ 0.57
CSTF2-204ENST00000475126 MAP3K1Q13233 1512 aa18.6■□□□□ 0.57
CSTF2-204ENST00000475126 CFAP43Q8NDM7 1665 aa18.59■□□□□ 0.57
CSTF2-204ENST00000475126 EPRSP07814 1512 aaKnown RBP18.59■□□□□ 0.57
CSTF2-204ENST00000475126 CDK13Q14004 1512 aaKnown RBP18.59■□□□□ 0.57
CSTF2-204ENST00000475126 LRRIQ1Q96JM4 1722 aa18.58■□□□□ 0.57
CSTF2-204ENST00000475126 CCDC18Q5T9S5 1454 aa18.57■□□□□ 0.56
CSTF2-204ENST00000475126 LRRC9Q6ZRR7 1453 aa18.56■□□□□ 0.56
CSTF2-204ENST00000475126 UACAQ9BZF9 1416 aa18.55■□□□□ 0.56
CSTF2-204ENST00000475126 ARHGEF11O15085 1522 aa18.53■□□□□ 0.56
CSTF2-204ENST00000475126 MAGI3Q5TCQ9 1506 aa18.51■□□□□ 0.55
CSTF2-204ENST00000475126 ABCC2Q92887 1545 aa18.51■□□□□ 0.55
CSTF2-204ENST00000475126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
CSTF2-204ENST00000475126 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
CSTF2-204ENST00000475126 MTUS2Q5JR59 1369 aa18.49■□□□□ 0.55
CSTF2-204ENST00000475126 ATP10BO94823 1461 aa18.48■□□□□ 0.55
CSTF2-204ENST00000475126 UHRF1BP1LA0JNW5 1464 aa18.46■□□□□ 0.55
CSTF2-204ENST00000475126 EHBP1L1Q8N3D4 1523 aa18.46■□□□□ 0.55
CSTF2-204ENST00000475126 TRIM26Q12899 539 aaPredicted RBP18.44■□□□□ 0.54
CSTF2-204ENST00000475126 RIMBP3CA6NJZ7 1639 aa18.44■□□□□ 0.54
CSTF2-204ENST00000475126 RIMBP3BA6NNM3 1639 aa18.44■□□□□ 0.54
CSTF2-204ENST00000475126 RIMBP3Q9UFD9 1639 aa18.44■□□□□ 0.54
CSTF2-204ENST00000475126 ADCY10Q96PN6 1610 aa18.43■□□□□ 0.54
CSTF2-204ENST00000475126 PCGF6Q9BYE7 350 aa18.41■□□□□ 0.54
CSTF2-204ENST00000475126 PHLDB1Q86UU1 1377 aa18.41■□□□□ 0.54
CSTF2-204ENST00000475126 KDM5BQ9UGL1 1544 aa18.4■□□□□ 0.54
CSTF2-204ENST00000475126 CDK11AQ9UQ88 783 aaPredicted RBP18.39■□□□□ 0.53
CSTF2-204ENST00000475126 TROQ12816 1431 aaPredicted RBP18.39■□□□□ 0.53
CSTF2-204ENST00000475126 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
CSTF2-204ENST00000475126 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
CSTF2-204ENST00000475126 CYB5RLQ6IPT4 315 aa18.35■□□□□ 0.53
CSTF2-204ENST00000475126 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
CSTF2-204ENST00000475126 PLEKHD1A6NEE1 506 aa18.34■□□□□ 0.53
CSTF2-204ENST00000475126 KIF14Q15058 1648 aa18.32■□□□□ 0.52
CSTF2-204ENST00000475126 RRBP1Q9P2E9 1410 aaKnown RBP18.31■□□□□ 0.52
CSTF2-204ENST00000475126 MYOM3Q5VTT5 1437 aa18.29■□□□□ 0.52
CSTF2-204ENST00000475126 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
CSTF2-204ENST00000475126 FGD6Q6ZV73 1430 aa18.27■□□□□ 0.51
CSTF2-204ENST00000475126 ASXL2Q76L83 1435 aa18.25■□□□□ 0.51
CSTF2-204ENST00000475126 ABCC10Q5T3U5 1492 aa18.25■□□□□ 0.51
CSTF2-204ENST00000475126 WDR7Q9Y4E6 1490 aa18.25■□□□□ 0.51
CSTF2-204ENST00000475126 NPM1P06748 294 aaKnown RBP eCLIP18.24■□□□□ 0.51
CSTF2-204ENST00000475126 KCNH8Q96L42 1107 aa18.23■□□□□ 0.51
CSTF2-204ENST00000475126 GPATCH8Q9UKJ3 1502 aaKnown RBP18.21■□□□□ 0.51
CSTF2-204ENST00000475126 FAM50AQ14320 339 aaKnown RBP18.21■□□□□ 0.51
CSTF2-204ENST00000475126 TTC37Q6PGP7 1564 aa18.2■□□□□ 0.5
CSTF2-204ENST00000475126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.2■□□□□ 0.5
CSTF2-204ENST00000475126 MIA2Q96PC5 1412 aa18.18■□□□□ 0.5
CSTF2-204ENST00000475126 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
CSTF2-204ENST00000475126 ITGAEP38570 1179 aa18.15■□□□□ 0.5
CSTF2-204ENST00000475126 TCOF1Q13428 1488 aaKnown RBP18.15■□□□□ 0.5
CSTF2-204ENST00000475126 CFDP1Q9UEE9 299 aaPredicted RBP18.15■□□□□ 0.5
CSTF2-204ENST00000475126 MAPKBP1O60336 1514 aa18.14■□□□□ 0.5
CSTF2-204ENST00000475126 ITSN2Q9NZM3 1697 aa18.14■□□□□ 0.49
CSTF2-204ENST00000475126 ZNF644Q9H582 1327 aaPredicted RBP18.14■□□□□ 0.49
CSTF2-204ENST00000475126 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.13■□□□□ 0.49
CSTF2-204ENST00000475126 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
CSTF2-204ENST00000475126 CDC42BPAQ5VT25 1732 aa18.13■□□□□ 0.49
CSTF2-204ENST00000475126 ZNF777Q9ULD5 760 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms