RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 RAPGEF2Q9Y4G8 1499 aa6.19□□□□□ -1.42
USP16-205ENST00000474835 SAMD9Q5K651 1589 aa6.19□□□□□ -1.42
USP16-205ENST00000474835 HMGXB3Q12766 1538 aa6.19□□□□□ -1.42
USP16-205ENST00000474835 CSRNP3Q8WYN3 585 aa6.18□□□□□ -1.42
USP16-205ENST00000474835 POTEDQ86YR6 584 aa6.17□□□□□ -1.42
USP16-205ENST00000474835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.17□□□□□ -1.42
USP16-205ENST00000474835 AQRO60306 1485 aaKnown RBP eCLIP6.17□□□□□ -1.424e-6■■■□□ 15.8
USP16-205ENST00000474835 THOC2Q8NI27 1593 aaKnown RBP6.17□□□□□ -1.42
USP16-205ENST00000474835 ARHGAP35Q9NRY4 1499 aa6.15□□□□□ -1.42
USP16-205ENST00000474835 CUX1P39880 1505 aa6.15□□□□□ -1.42
USP16-205ENST00000474835 PPP1R15AO75807 674 aaPredicted RBP6.14□□□□□ -1.43
USP16-205ENST00000474835 PTPN23Q9H3S7 1636 aa6.13□□□□□ -1.43
USP16-205ENST00000474835 RNF123Q5XPI4 1314 aa6.13□□□□□ -1.43
USP16-205ENST00000474835 CROCC2H7BZ55 1655 aa6.12□□□□□ -1.43
USP16-205ENST00000474835 PCF11O94913 1555 aaKnown RBP6.12□□□□□ -1.43
USP16-205ENST00000474835 MBD5Q9P267 1494 aa6.12□□□□□ -1.43
USP16-205ENST00000474835 SHROOM2Q13796 1616 aa6.11□□□□□ -1.43
USP16-205ENST00000474835 ZMYM4Q5VZL5 1548 aa6.11□□□□□ -1.43
USP16-205ENST00000474835 SNAPC4Q5SXM2 1469 aa6.11□□□□□ -1.43
USP16-205ENST00000474835 CC2D2AQ9P2K1 1620 aa6.1□□□□□ -1.43
USP16-205ENST00000474835 TCOF1Q13428 1488 aaKnown RBP6.09□□□□□ -1.43
USP16-205ENST00000474835 AKNAQ7Z591 1439 aa6.09□□□□□ -1.43
USP16-205ENST00000474835 LAMC1P11047 1609 aa6.08□□□□□ -1.44
USP16-205ENST00000474835 BCORL1Q5H9F3 1711 aa6.08□□□□□ -1.44
USP16-205ENST00000474835 ATAD2BQ9ULI0 1458 aa6.08□□□□□ -1.44
USP16-205ENST00000474835 EFCAB5A4FU69 1503 aa6.08□□□□□ -1.44
USP16-205ENST00000474835 LRRC9Q6ZRR7 1453 aa6.08□□□□□ -1.44
USP16-205ENST00000474835 SPATA31E1Q6ZUB1 1445 aa6.07□□□□□ -1.44
USP16-205ENST00000474835 CUL7Q14999 1698 aa6.07□□□□□ -1.44
USP16-205ENST00000474835 WASHC2AQ641Q2 1341 aa6.06□□□□□ -1.44
USP16-205ENST00000474835 FHAD1B1AJZ9 1412 aa6.06□□□□□ -1.44
USP16-205ENST00000474835 CCER2I3L3R5 266 aa6.06□□□□□ -1.44
USP16-205ENST00000474835 GAPVD1Q14C86 1478 aa6.06□□□□□ -1.44
USP16-205ENST00000474835 KDM6BO15054 1643 aa6.05□□□□□ -1.44
USP16-205ENST00000474835 RBM19Q9Y4C8 960 aaKnown RBP6.05□□□□□ -1.44
USP16-205ENST00000474835 ERICH6BQ5W0A0 696 aa6.04□□□□□ -1.44
USP16-205ENST00000474835 FYCO1Q9BQS8 1478 aa6.04□□□□□ -1.44
USP16-205ENST00000474835 TIMELESSQ9UNS1 1208 aa6.04□□□□□ -1.44
USP16-205ENST00000474835 KDM5CP41229 1560 aa6.04□□□□□ -1.44
USP16-205ENST00000474835 ADCY10Q96PN6 1610 aa6.04□□□□□ -1.44
USP16-205ENST00000474835 C11orf95C9JLR9 678 aaPredicted RBP6.03□□□□□ -1.44
USP16-205ENST00000474835 CCER1Q8TC90 406 aaPredicted RBP6.03□□□□□ -1.44
USP16-205ENST00000474835 ADGBQ8N7X0 1667 aa6.03□□□□□ -1.44
USP16-205ENST00000474835 CEP170Q5SW79 1584 aa6.03□□□□□ -1.44
USP16-205ENST00000474835 TEX14Q8IWB6 1497 aa6.03□□□□□ -1.44
USP16-205ENST00000474835 UGGT2Q9NYU1 1516 aa6.03□□□□□ -1.44
USP16-205ENST00000474835 MYOM3Q5VTT5 1437 aa6.02□□□□□ -1.45
USP16-205ENST00000474835 WASHC2CQ9Y4E1 1318 aa6.02□□□□□ -1.45
USP16-205ENST00000474835 CFTRP13569 1480 aa6.02□□□□□ -1.45
USP16-205ENST00000474835 KIF14Q15058 1648 aa6.02□□□□□ -1.45
USP16-205ENST00000474835 ARHGEF12Q9NZN5 1544 aa6.01□□□□□ -1.45
USP16-205ENST00000474835 HFM1A2PYH4 1435 aa6.01□□□□□ -1.45
USP16-205ENST00000474835 FGD5Q6ZNL6 1462 aa6□□□□□ -1.45
USP16-205ENST00000474835 GRIN2BQ13224 1484 aa6□□□□□ -1.45
USP16-205ENST00000474835 MAGI3Q5TCQ9 1506 aa6□□□□□ -1.45
USP16-205ENST00000474835 NCOA1Q15788 1441 aa5.99□□□□□ -1.45
USP16-205ENST00000474835 RNF17Q9BXT8 1623 aaKnown RBP5.99□□□□□ -1.45
USP16-205ENST00000474835 KDM5DQ9BY66 1539 aa5.99□□□□□ -1.45
USP16-205ENST00000474835 INSRP06213 1382 aa5.99□□□□□ -1.45
USP16-205ENST00000474835 CCNB3Q8WWL7 1395 aa5.99□□□□□ -1.45
USP16-205ENST00000474835 MYT1LQ9UL68 1186 aa5.99□□□□□ -1.45
USP16-205ENST00000474835 CLASP1Q7Z460 1538 aa5.99□□□□□ -1.45
USP16-205ENST00000474835 CCDC18Q5T9S5 1454 aa5.98□□□□□ -1.45
USP16-205ENST00000474835 PTPRKQ15262 1439 aa5.98□□□□□ -1.45
USP16-205ENST00000474835 RAB3GAP2Q9H2M9 1393 aa5.98□□□□□ -1.45
USP16-205ENST00000474835 UBE2Q2Q8WVN8 375 aa5.98□□□□□ -1.45
USP16-205ENST00000474835 SUPT6HQ7KZ85 1726 aaKnown RBP5.97□□□□□ -1.45
USP16-205ENST00000474835 DNMT1P26358 1616 aaKnown RBP5.97□□□□□ -1.45
USP16-205ENST00000474835 KCNH8Q96L42 1107 aa5.97□□□□□ -1.45
USP16-205ENST00000474835 ZNF608Q9ULD9 1512 aaPredicted RBP5.97□□□□□ -1.45
USP16-205ENST00000474835 SETD5Q9C0A6 1442 aa5.97□□□□□ -1.45
USP16-205ENST00000474835 ITSN2Q9NZM3 1697 aa5.96□□□□□ -1.45
USP16-205ENST00000474835 PHLDB1Q86UU1 1377 aa5.96□□□□□ -1.46
USP16-205ENST00000474835 CASKIN1Q8WXD9 1431 aa5.96□□□□□ -1.46
USP16-205ENST00000474835 UACAQ9BZF9 1416 aa5.96□□□□□ -1.46
USP16-205ENST00000474835 PPRC1Q5VV67 1664 aaKnown RBP5.95□□□□□ -1.46
USP16-205ENST00000474835 SMG6Q86US8 1419 aaKnown RBP5.94□□□□□ -1.46
USP16-205ENST00000474835 ABCC10Q5T3U5 1492 aa5.94□□□□□ -1.46
USP16-205ENST00000474835 MYOM1P52179 1685 aa5.94□□□□□ -1.46
USP16-205ENST00000474835 TRPM1Q7Z4N2 1603 aa5.94□□□□□ -1.46
USP16-205ENST00000474835 NAIPQ13075 1403 aa5.94□□□□□ -1.46
USP16-205ENST00000474835 PBRM1Q86U86 1689 aa5.93□□□□□ -1.46
USP16-205ENST00000474835 DHX29Q7Z478 1369 aaKnown RBP5.93□□□□□ -1.46
USP16-205ENST00000474835 CDC42BPAQ5VT25 1732 aa5.93□□□□□ -1.46
USP16-205ENST00000474835 MYO5CQ9NQX4 1742 aa5.93□□□□□ -1.46
USP16-205ENST00000474835 EHBP1L1Q8N3D4 1523 aa5.93□□□□□ -1.46
USP16-205ENST00000474835 ABCA10Q8WWZ4 1543 aa5.92□□□□□ -1.46
USP16-205ENST00000474835 LRPPRCP42704 1394 aaKnown RBP5.92□□□□□ -1.46
USP16-205ENST00000474835 NLRP1Q9C000 1473 aa5.92□□□□□ -1.46
USP16-205ENST00000474835 PLXNC1O60486 1568 aa5.92□□□□□ -1.46
USP16-205ENST00000474835 KANK4Q5T7N3 995 aaPredicted RBP5.92□□□□□ -1.46
USP16-205ENST00000474835 CCDC144AA2RUR9 1427 aa5.92□□□□□ -1.46
USP16-205ENST00000474835 CNTLNQ9NXG0 1405 aa5.92□□□□□ -1.46
USP16-205ENST00000474835 CEP152O94986 1710 aa5.91□□□□□ -1.46
USP16-205ENST00000474835 NESP48681 1621 aa5.91□□□□□ -1.46
USP16-205ENST00000474835 ABCC2Q92887 1545 aa5.91□□□□□ -1.46
USP16-205ENST00000474835 UHRF1BP1Q6BDS2 1440 aa5.91□□□□□ -1.46
USP16-205ENST00000474835 TARBP1Q13395 1621 aaKnown RBP5.9□□□□□ -1.46
USP16-205ENST00000474835 ERICH6Q7L0X2 663 aa5.9□□□□□ -1.46
USP16-205ENST00000474835 DNMBPQ6XZF7 1577 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms