RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 LOC105371045A0A1W2PR82 267 aa16.4■□□□□ 0.22
COL8A1-206ENST00000474648 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
COL8A1-206ENST00000474648 GRIN2AQ12879 1464 aa16.36■□□□□ 0.21
COL8A1-206ENST00000474648 KIF21BO75037 1637 aa16.35■□□□□ 0.21
COL8A1-206ENST00000474648 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
COL8A1-206ENST00000474648 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
COL8A1-206ENST00000474648 GOLGA3Q08378 1498 aa16.33■□□□□ 0.2
COL8A1-206ENST00000474648 UBTFP17480 764 aaKnown RBP16.32■□□□□ 0.2
COL8A1-206ENST00000474648 NUP160Q12769 1436 aa16.31■□□□□ 0.2
COL8A1-206ENST00000474648 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
COL8A1-206ENST00000474648 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
COL8A1-206ENST00000474648 CHD1O14646 1710 aa16.27■□□□□ 0.19
COL8A1-206ENST00000474648 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
COL8A1-206ENST00000474648 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
COL8A1-206ENST00000474648 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
COL8A1-206ENST00000474648 POTEDQ86YR6 584 aa16.24■□□□□ 0.19
COL8A1-206ENST00000474648 JPH4Q96JJ6 628 aa16.21■□□□□ 0.19
COL8A1-206ENST00000474648 CLASP1Q7Z460 1538 aa16.18■□□□□ 0.18
COL8A1-206ENST00000474648 RANGAP1P46060 587 aaPredicted RBP16.15■□□□□ 0.18
COL8A1-206ENST00000474648 IQGAP2Q13576 1575 aa16.13■□□□□ 0.17
COL8A1-206ENST00000474648 UGGT2Q9NYU1 1516 aa16.11■□□□□ 0.17
COL8A1-206ENST00000474648 CTTNBP2Q8WZ74 1663 aa16.1■□□□□ 0.17
COL8A1-206ENST00000474648 PRG4Q92954 1404 aaPredicted RBP16.1■□□□□ 0.17
COL8A1-206ENST00000474648 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
COL8A1-206ENST00000474648 CEP162Q5TB80 1403 aa16.09■□□□□ 0.17
COL8A1-206ENST00000474648 P3H3Q8IVL6 736 aa16.08■□□□□ 0.16
COL8A1-206ENST00000474648 CLIP1P30622 1438 aa16.08■□□□□ 0.16
COL8A1-206ENST00000474648 DISP1Q96F81 1524 aa16.08■□□□□ 0.16
COL8A1-206ENST00000474648 SHROOM2Q13796 1616 aa16.08■□□□□ 0.16
COL8A1-206ENST00000474648 ARHGAP35Q9NRY4 1499 aa16.05■□□□□ 0.16
COL8A1-206ENST00000474648 ERCC6L2Q5T890 1561 aa16.03■□□□□ 0.16
COL8A1-206ENST00000474648 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.16
COL8A1-206ENST00000474648 SAMD9Q5K651 1589 aa16.01■□□□□ 0.15
COL8A1-206ENST00000474648 EFCAB5A4FU69 1503 aa16■□□□□ 0.15
COL8A1-206ENST00000474648 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
COL8A1-206ENST00000474648 FHOD3Q2V2M9 1422 aa16■□□□□ 0.15
COL8A1-206ENST00000474648 ARAP1Q96P48 1450 aa15.99■□□□□ 0.15
COL8A1-206ENST00000474648 KIAA0556O60303 1618 aa15.98■□□□□ 0.15
COL8A1-206ENST00000474648 PTPRGP23470 1445 aa15.96■□□□□ 0.15
COL8A1-206ENST00000474648 ARHGEF11O15085 1522 aa15.96■□□□□ 0.15
COL8A1-206ENST00000474648 TTBK1Q5TCY1 1321 aaPredicted RBP15.95■□□□□ 0.14
COL8A1-206ENST00000474648 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
COL8A1-206ENST00000474648 FMN1Q68DA7 1419 aa15.89■□□□□ 0.13
COL8A1-206ENST00000474648 RIMBP3CA6NJZ7 1639 aa15.89■□□□□ 0.13
COL8A1-206ENST00000474648 RIMBP3BA6NNM3 1639 aa15.89■□□□□ 0.13
COL8A1-206ENST00000474648 RIMBP3Q9UFD9 1639 aa15.89■□□□□ 0.13
COL8A1-206ENST00000474648 CYB5RLQ6IPT4 315 aa15.88■□□□□ 0.13
COL8A1-206ENST00000474648 VPS8Q8N3P4 1428 aa15.86■□□□□ 0.13
COL8A1-206ENST00000474648 UACAQ9BZF9 1416 aa15.85■□□□□ 0.13
COL8A1-206ENST00000474648 PLB1Q6P1J6 1458 aa15.85■□□□□ 0.13
COL8A1-206ENST00000474648 CASKIN1Q8WXD9 1431 aa15.84■□□□□ 0.13
COL8A1-206ENST00000474648 ABCA8O94911 1581 aa15.83■□□□□ 0.12
COL8A1-206ENST00000474648 ATP1B4Q9UN42 357 aaPredicted RBP15.81■□□□□ 0.12
COL8A1-206ENST00000474648 UHRF1BP1LA0JNW5 1464 aa15.8■□□□□ 0.12
COL8A1-206ENST00000474648 NCBP3Q53F19 620 aaKnown RBP15.8■□□□□ 0.12
COL8A1-206ENST00000474648 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
COL8A1-206ENST00000474648 ARID3CA6NKF2 412 aa15.78■□□□□ 0.12
COL8A1-206ENST00000474648 KCNA4P22459 653 aa15.77■□□□□ 0.12
COL8A1-206ENST00000474648 ABCC2Q92887 1545 aa15.77■□□□□ 0.11
COL8A1-206ENST00000474648 FYCO1Q9BQS8 1478 aa15.77■□□□□ 0.11
COL8A1-206ENST00000474648 RAPGEF6Q8TEU7 1601 aa15.76■□□□□ 0.11
COL8A1-206ENST00000474648 ATP10BO94823 1461 aa15.76■□□□□ 0.11
COL8A1-206ENST00000474648 PCF11O94913 1555 aaKnown RBP15.75■□□□□ 0.11
COL8A1-206ENST00000474648 ADCY10Q96PN6 1610 aa15.73■□□□□ 0.11
COL8A1-206ENST00000474648 EPRSP07814 1512 aaKnown RBP15.73■□□□□ 0.11
COL8A1-206ENST00000474648 KDM5BQ9UGL1 1544 aa15.73■□□□□ 0.11
COL8A1-206ENST00000474648 HECW1Q76N89 1606 aa15.7■□□□□ 0.1
COL8A1-206ENST00000474648 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL8A1-206ENST00000474648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
COL8A1-206ENST00000474648 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
COL8A1-206ENST00000474648 KANK4Q5T7N3 995 aaPredicted RBP15.69■□□□□ 0.1
COL8A1-206ENST00000474648 CDK13Q14004 1512 aaKnown RBP15.68■□□□□ 0.1
COL8A1-206ENST00000474648 APLP2Q06481 763 aa15.68■□□□□ 0.1
COL8A1-206ENST00000474648 MAP3K1Q13233 1512 aa15.68■□□□□ 0.1
COL8A1-206ENST00000474648 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
COL8A1-206ENST00000474648 PLEKHD1A6NEE1 506 aa15.66■□□□□ 0.1
COL8A1-206ENST00000474648 HOXD11P31277 338 aaPredicted RBP15.66■□□□□ 0.1
COL8A1-206ENST00000474648 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
COL8A1-206ENST00000474648 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
COL8A1-206ENST00000474648 CDK11AQ9UQ88 783 aaPredicted RBP15.65■□□□□ 0.1
COL8A1-206ENST00000474648 LRRIQ1Q96JM4 1722 aa15.65■□□□□ 0.1
COL8A1-206ENST00000474648 PPARGC1BQ86YN6 1023 aaKnown RBP15.63■□□□□ 0.09
COL8A1-206ENST00000474648 TIAM1Q13009 1591 aa15.62■□□□□ 0.09
COL8A1-206ENST00000474648 ZCCHC11Q5TAX3 1644 aaKnown RBP15.62■□□□□ 0.09
COL8A1-206ENST00000474648 MAGI3Q5TCQ9 1506 aa15.62■□□□□ 0.09
COL8A1-206ENST00000474648 ASXL2Q76L83 1435 aa15.61■□□□□ 0.09
COL8A1-206ENST00000474648 LRRC9Q6ZRR7 1453 aa15.6■□□□□ 0.09
COL8A1-206ENST00000474648 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
COL8A1-206ENST00000474648 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
COL8A1-206ENST00000474648 KCNH8Q96L42 1107 aa15.58■□□□□ 0.08
COL8A1-206ENST00000474648 MAPKBP1O60336 1514 aa15.57■□□□□ 0.08
COL8A1-206ENST00000474648 WDR7Q9Y4E6 1490 aa15.56■□□□□ 0.08
COL8A1-206ENST00000474648 CFAP43Q8NDM7 1665 aa15.56■□□□□ 0.08
COL8A1-206ENST00000474648 EHBP1L1Q8N3D4 1523 aa15.52■□□□□ 0.07
COL8A1-206ENST00000474648 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
COL8A1-206ENST00000474648 ABCC10Q5T3U5 1492 aa15.49■□□□□ 0.07
COL8A1-206ENST00000474648 FAM69CQ0P6D2 419 aa15.48■□□□□ 0.07
COL8A1-206ENST00000474648 KIF14Q15058 1648 aa15.47■□□□□ 0.07
COL8A1-206ENST00000474648 PHLDB1Q86UU1 1377 aa15.47■□□□□ 0.07
COL8A1-206ENST00000474648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms