RNA–Protein interactions for RNA: ENST00000474393.5

TMCO3-207, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2 BASIC

Gene TMCO3, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-207ENST00000474393 ARHGAP35Q9NRY4 1499 aa22.32■■□□□ 1.16
TMCO3-207ENST00000474393 CUL7Q14999 1698 aa22.29■■□□□ 1.16
TMCO3-207ENST00000474393 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
TMCO3-207ENST00000474393 ABCA5Q8WWZ7 1642 aa22.25■■□□□ 1.15
TMCO3-207ENST00000474393 GAPVD1Q14C86 1478 aa22.24■■□□□ 1.15
TMCO3-207ENST00000474393 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
TMCO3-207ENST00000474393 HNRNPUL2Q1KMD3 747 aaKnown RBP22.23■■□□□ 1.15
TMCO3-207ENST00000474393 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
TMCO3-207ENST00000474393 KANK4Q5T7N3 995 aaPredicted RBP22.13■■□□□ 1.13
TMCO3-207ENST00000474393 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
TMCO3-207ENST00000474393 P3H3Q8IVL6 736 aa22.09■■□□□ 1.13
TMCO3-207ENST00000474393 WDR62O43379 1518 aa22.07■■□□□ 1.12
TMCO3-207ENST00000474393 ERCC6Q03468 1493 aa22.06■■□□□ 1.12
TMCO3-207ENST00000474393 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.125e-6■■□□□ 12.1
TMCO3-207ENST00000474393 EFCAB5A4FU69 1503 aa22.05■■□□□ 1.12
TMCO3-207ENST00000474393 PBRM1Q86U86 1689 aa22.05■■□□□ 1.12
TMCO3-207ENST00000474393 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
TMCO3-207ENST00000474393 FHOD3Q2V2M9 1422 aa22.03■■□□□ 1.12
TMCO3-207ENST00000474393 IFT140Q96RY7 1462 aa22.02■■□□□ 1.12
TMCO3-207ENST00000474393 TIAM1Q13009 1591 aa21.99■■□□□ 1.11
TMCO3-207ENST00000474393 MAP3K1Q13233 1512 aa21.98■■□□□ 1.11
TMCO3-207ENST00000474393 PCF11O94913 1555 aaKnown RBP21.98■■□□□ 1.11
TMCO3-207ENST00000474393 SUPT16HQ9Y5B9 1047 aaKnown RBP21.98■■□□□ 1.11
TMCO3-207ENST00000474393 GRIN2BQ13224 1484 aa21.97■■□□□ 1.11
TMCO3-207ENST00000474393 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
TMCO3-207ENST00000474393 ATP1B4Q9UN42 357 aaPredicted RBP21.95■■□□□ 1.1
TMCO3-207ENST00000474393 ADAMTS12P58397 1594 aa21.95■■□□□ 1.1
TMCO3-207ENST00000474393 THOC2Q8NI27 1593 aaKnown RBP21.92■■□□□ 1.1
TMCO3-207ENST00000474393 RRBP1Q9P2E9 1410 aaKnown RBP21.92■■□□□ 1.1
TMCO3-207ENST00000474393 FYCO1Q9BQS8 1478 aa21.91■■□□□ 1.1
TMCO3-207ENST00000474393 SAMD9Q5K651 1589 aa21.9■■□□□ 1.1
TMCO3-207ENST00000474393 FMN1Q68DA7 1419 aa21.9■■□□□ 1.1
TMCO3-207ENST00000474393 LRRC9Q6ZRR7 1453 aa21.9■■□□□ 1.1
TMCO3-207ENST00000474393 CASKIN1Q8WXD9 1431 aa21.9■■□□□ 1.1
TMCO3-207ENST00000474393 CFAP43Q8NDM7 1665 aa21.89■■□□□ 1.09
TMCO3-207ENST00000474393 TSHZ2Q9NRE2 1034 aa21.86■■□□□ 1.09
TMCO3-207ENST00000474393 CCNB3Q8WWL7 1395 aa21.85■■□□□ 1.09
TMCO3-207ENST00000474393 BCANQ96GW7 911 aa21.85■■□□□ 1.09
TMCO3-207ENST00000474393 EIF4G3O43432 1585 aaKnown RBP21.85■■□□□ 1.09
TMCO3-207ENST00000474393 IQGAP2Q13576 1575 aa21.82■■□□□ 1.08
TMCO3-207ENST00000474393 SNAPC4Q5SXM2 1469 aa21.82■■□□□ 1.08
TMCO3-207ENST00000474393 ANP32EQ9BTT0 268 aa21.77■■□□□ 1.08
TMCO3-207ENST00000474393 BCL11AQ9H165 835 aa21.77■■□□□ 1.08
TMCO3-207ENST00000474393 PHLDB1Q86UU1 1377 aa21.76■■□□□ 1.07
TMCO3-207ENST00000474393 KCNH8Q96L42 1107 aa21.74■■□□□ 1.07
TMCO3-207ENST00000474393 ITGAEP38570 1179 aa21.73■■□□□ 1.07
TMCO3-207ENST00000474393 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
TMCO3-207ENST00000474393 MAGI1Q96QZ7 1491 aaPredicted RBP21.71■■□□□ 1.07
TMCO3-207ENST00000474393 KIAA0586Q9BVV6 1533 aa21.69■■□□□ 1.06
TMCO3-207ENST00000474393 LRRIQ1Q96JM4 1722 aa21.69■■□□□ 1.06
TMCO3-207ENST00000474393 UGGT2Q9NYU1 1516 aa21.69■■□□□ 1.06
TMCO3-207ENST00000474393 MTUS2Q5JR59 1369 aa21.68■■□□□ 1.06
TMCO3-207ENST00000474393 CHMP7Q8WUX9 453 aaPredicted RBP21.67■■□□□ 1.06
TMCO3-207ENST00000474393 FAM50AQ14320 339 aaKnown RBP21.66■■□□□ 1.06
TMCO3-207ENST00000474393 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
TMCO3-207ENST00000474393 FBLN2P98095 1184 aa21.63■■□□□ 1.05
TMCO3-207ENST00000474393 HECW1Q76N89 1606 aa21.61■■□□□ 1.05
TMCO3-207ENST00000474393 DHX57Q6P158 1386 aaKnown RBP21.61■■□□□ 1.05
TMCO3-207ENST00000474393 CCDC18Q5T9S5 1454 aa21.6■■□□□ 1.05
TMCO3-207ENST00000474393 KIAA0556O60303 1618 aa21.59■■□□□ 1.05
TMCO3-207ENST00000474393 DISP1Q96F81 1524 aa21.58■■□□□ 1.05
TMCO3-207ENST00000474393 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
TMCO3-207ENST00000474393 EHBP1L1Q8N3D4 1523 aa21.57■■□□□ 1.04
TMCO3-207ENST00000474393 CLSPNQ9HAW4 1339 aa21.55■■□□□ 1.04
TMCO3-207ENST00000474393 FGD6Q6ZV73 1430 aa21.55■■□□□ 1.04
TMCO3-207ENST00000474393 NCOA2Q15596 1464 aa21.55■■□□□ 1.04
TMCO3-207ENST00000474393 SUPT6HQ7KZ85 1726 aaKnown RBP21.55■■□□□ 1.04
TMCO3-207ENST00000474393 EPRSP07814 1512 aaKnown RBP21.54■■□□□ 1.04
TMCO3-207ENST00000474393 RAB3GAP2Q9H2M9 1393 aa21.53■■□□□ 1.04
TMCO3-207ENST00000474393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.53■■□□□ 1.046e-8■■■□□ 14.6
TMCO3-207ENST00000474393 FKBP8Q14318 412 aa21.53■■□□□ 1.04
TMCO3-207ENST00000474393 MAGI3Q5TCQ9 1506 aa21.52■■□□□ 1.04
TMCO3-207ENST00000474393 NUP160Q12769 1436 aa21.51■■□□□ 1.03
TMCO3-207ENST00000474393 SETD5Q9C0A6 1442 aa21.51■■□□□ 1.03
TMCO3-207ENST00000474393 ARID3CA6NKF2 412 aa21.51■■□□□ 1.03
TMCO3-207ENST00000474393 CDK13Q14004 1512 aaKnown RBP21.5■■□□□ 1.03
TMCO3-207ENST00000474393 MYOM3Q5VTT5 1437 aa21.49■■□□□ 1.03
TMCO3-207ENST00000474393 JPH4Q96JJ6 628 aa21.45■■□□□ 1.02
TMCO3-207ENST00000474393 ARHGEF11O15085 1522 aa21.44■■□□□ 1.02
TMCO3-207ENST00000474393 RAPGEF6Q8TEU7 1601 aa21.44■■□□□ 1.02
TMCO3-207ENST00000474393 CARMIL2Q6F5E8 1435 aa21.43■■□□□ 1.02
TMCO3-207ENST00000474393 NUP153P49790 1475 aaKnown RBP21.42■■□□□ 1.02
TMCO3-207ENST00000474393 PTPN23Q9H3S7 1636 aa21.39■■□□□ 1.01
TMCO3-207ENST00000474393 RBM19Q9Y4C8 960 aaKnown RBP21.37■■□□□ 1.01
TMCO3-207ENST00000474393 PLB1Q6P1J6 1458 aa21.35■■□□□ 1.01
TMCO3-207ENST00000474393 PTPRKQ15262 1439 aa21.35■■□□□ 1.01
TMCO3-207ENST00000474393 HIRIP3Q9BW71 556 aaPredicted RBP21.35■■□□□ 1.01
TMCO3-207ENST00000474393 TRIM52Q96A61 297 aa21.34■■□□□ 1.01
TMCO3-207ENST00000474393 CDK11AQ9UQ88 783 aaPredicted RBP21.34■■□□□ 1.01
TMCO3-207ENST00000474393 DDX10Q13206 875 aaKnown RBP21.33■■□□□ 1.01
TMCO3-207ENST00000474393 MAPKBP1O60336 1514 aa21.33■■□□□ 1
TMCO3-207ENST00000474393 TCOF1Q13428 1488 aaKnown RBP21.31■■□□□ 1
TMCO3-207ENST00000474393 CHD1O14646 1710 aa21.31■■□□□ 1
TMCO3-207ENST00000474393 MIA2Q96PC5 1412 aa21.3■■□□□ 1
TMCO3-207ENST00000474393 HFM1A2PYH4 1435 aa21.29■■□□□ 1
TMCO3-207ENST00000474393 PRG4Q92954 1404 aaPredicted RBP21.26■□□□□ 0.99
TMCO3-207ENST00000474393 TROQ12816 1431 aaPredicted RBP21.24■□□□□ 0.99
TMCO3-207ENST00000474393 NAIPQ13075 1403 aa21.24■□□□□ 0.99
TMCO3-207ENST00000474393 ABCA8O94911 1581 aa21.22■□□□□ 0.99
TMCO3-207ENST00000474393 MSH5O43196 834 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms