RNA–Protein interactions for RNA: ENST00000473894.1

RAB4A-202, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB4A, Length 708 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-202ENST00000473894 RIMBP3BA6NNM3 1639 aa29.27■■■□□ 2.28
RAB4A-202ENST00000473894 RIMBP3Q9UFD9 1639 aa29.27■■■□□ 2.28
RAB4A-202ENST00000473894 KIAA0586Q9BVV6 1533 aa29.2■■■□□ 2.27
RAB4A-202ENST00000473894 ARHGEF11O15085 1522 aa29.19■■■□□ 2.26
RAB4A-202ENST00000473894 GOLGA3Q08378 1498 aa29.15■■■□□ 2.26
RAB4A-202ENST00000473894 CTTNBP2Q8WZ74 1663 aa29.12■■■□□ 2.25
RAB4A-202ENST00000473894 SHROOM2Q13796 1616 aa29.12■■■□□ 2.25
RAB4A-202ENST00000473894 IQGAP2Q13576 1575 aa29.09■■■□□ 2.25
RAB4A-202ENST00000473894 CYB5RLQ6IPT4 315 aa29.07■■■□□ 2.24
RAB4A-202ENST00000473894 JPH4Q96JJ6 628 aa29.01■■■□□ 2.23
RAB4A-202ENST00000473894 UGGT2Q9NYU1 1516 aa28.99■■■□□ 2.23
RAB4A-202ENST00000473894 UBTFP17480 764 aaKnown RBP28.93■■■□□ 2.22
RAB4A-202ENST00000473894 PRG4Q92954 1404 aaPredicted RBP28.91■■■□□ 2.22
RAB4A-202ENST00000473894 TNIKQ9UKE5 1360 aa28.9■■■□□ 2.22
RAB4A-202ENST00000473894 ARAP1Q96P48 1450 aa28.9■■■□□ 2.22
RAB4A-202ENST00000473894 DISP1Q96F81 1524 aa28.87■■■□□ 2.21
RAB4A-202ENST00000473894 ERCC6L2Q5T890 1561 aa28.86■■■□□ 2.21
RAB4A-202ENST00000473894 EHMT2Q96KQ7 1210 aa28.84■■■□□ 2.21
RAB4A-202ENST00000473894 CARMIL2Q6F5E8 1435 aa28.83■■■□□ 2.21
RAB4A-202ENST00000473894 TRHP20396 242 aaPredicted RBP28.82■■■□□ 2.2
RAB4A-202ENST00000473894 SAMD9Q5K651 1589 aa28.81■■■□□ 2.2
RAB4A-202ENST00000473894 KIAA0556O60303 1618 aa28.8■■■□□ 2.2
RAB4A-202ENST00000473894 LOC105371045A0A1W2PR82 267 aa28.79■■■□□ 2.2
RAB4A-202ENST00000473894 EFCAB5A4FU69 1503 aa28.77■■■□□ 2.2
RAB4A-202ENST00000473894 ARHGAP35Q9NRY4 1499 aa28.67■■■□□ 2.18
RAB4A-202ENST00000473894 PTPRGP23470 1445 aa28.63■■■□□ 2.17
RAB4A-202ENST00000473894 CLIP1P30622 1438 aa28.61■■■□□ 2.17
RAB4A-202ENST00000473894 CEP162Q5TB80 1403 aa28.61■■■□□ 2.17
RAB4A-202ENST00000473894 RANGAP1P46060 587 aaPredicted RBP28.58■■■□□ 2.17
RAB4A-202ENST00000473894 FHOD3Q2V2M9 1422 aa28.56■■■□□ 2.16
RAB4A-202ENST00000473894 P3H3Q8IVL6 736 aa28.54■■■□□ 2.16
RAB4A-202ENST00000473894 UHRF1BP1LA0JNW5 1464 aa28.49■■■□□ 2.15
RAB4A-202ENST00000473894 ABCA8O94911 1581 aa28.49■■■□□ 2.15
RAB4A-202ENST00000473894 UACAQ9BZF9 1416 aa28.48■■■□□ 2.15
RAB4A-202ENST00000473894 FMN1Q68DA7 1419 aa28.47■■■□□ 2.15
RAB4A-202ENST00000473894 ABCC2Q92887 1545 aa28.44■■■□□ 2.14
RAB4A-202ENST00000473894 ADCY10Q96PN6 1610 aa28.44■■■□□ 2.14
RAB4A-202ENST00000473894 PLB1Q6P1J6 1458 aa28.44■■■□□ 2.14
RAB4A-202ENST00000473894 RAPGEF6Q8TEU7 1601 aa28.4■■■□□ 2.14
RAB4A-202ENST00000473894 TTBK1Q5TCY1 1321 aaPredicted RBP28.39■■■□□ 2.13
RAB4A-202ENST00000473894 KDM5BQ9UGL1 1544 aa28.34■■■□□ 2.13
RAB4A-202ENST00000473894 CASKIN1Q8WXD9 1431 aa28.32■■■□□ 2.12
RAB4A-202ENST00000473894 NUP153P49790 1475 aaKnown RBP28.31■■■□□ 2.12
RAB4A-202ENST00000473894 FYCO1Q9BQS8 1478 aa28.27■■■□□ 2.12
RAB4A-202ENST00000473894 PCF11O94913 1555 aaKnown RBP28.27■■■□□ 2.12
RAB4A-202ENST00000473894 VPS8Q8N3P4 1428 aa28.26■■■□□ 2.12
RAB4A-202ENST00000473894 HECW1Q76N89 1606 aa28.26■■■□□ 2.11
RAB4A-202ENST00000473894 ATP10BO94823 1461 aa28.23■■■□□ 2.11
RAB4A-202ENST00000473894 ZCCHC11Q5TAX3 1644 aaKnown RBP28.23■■■□□ 2.11
RAB4A-202ENST00000473894 MAPKBP1O60336 1514 aa28.22■■■□□ 2.11
RAB4A-202ENST00000473894 AEBP2Q6ZN18 517 aaPredicted RBP28.21■■■□□ 2.11
RAB4A-202ENST00000473894 NPM1P06748 294 aaKnown RBP eCLIP28.2■■■□□ 2.1
RAB4A-202ENST00000473894 EPRSP07814 1512 aaKnown RBP28.18■■■□□ 2.1
RAB4A-202ENST00000473894 LRRIQ1Q96JM4 1722 aa28.17■■■□□ 2.1
RAB4A-202ENST00000473894 CCDC18Q5T9S5 1454 aa28.15■■■□□ 2.1
RAB4A-202ENST00000473894 CDK13Q14004 1512 aaKnown RBP28.1■■■□□ 2.09
RAB4A-202ENST00000473894 ASXL2Q76L83 1435 aa28.09■■■□□ 2.09
RAB4A-202ENST00000473894 MAP3K1Q13233 1512 aa28.05■■■□□ 2.08
RAB4A-202ENST00000473894 ATP1B4Q9UN42 357 aaPredicted RBP28.05■■■□□ 2.08
RAB4A-202ENST00000473894 WDR7Q9Y4E6 1490 aa28.05■■■□□ 2.08
RAB4A-202ENST00000473894 ARID3CA6NKF2 412 aa28.04■■■□□ 2.08
RAB4A-202ENST00000473894 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
RAB4A-202ENST00000473894 ABCC10Q5T3U5 1492 aa27.99■■■□□ 2.07
RAB4A-202ENST00000473894 CDK11AQ9UQ88 783 aaPredicted RBP27.98■■■□□ 2.07
RAB4A-202ENST00000473894 PLEKHD1A6NEE1 506 aa27.97■■■□□ 2.07
RAB4A-202ENST00000473894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.97■■■□□ 2.07
RAB4A-202ENST00000473894 HNRNPUL2Q1KMD3 747 aaKnown RBP27.97■■■□□ 2.07
RAB4A-202ENST00000473894 TIAM1Q13009 1591 aa27.97■■■□□ 2.07
RAB4A-202ENST00000473894 DIP2BQ9P265 1576 aa27.95■■■□□ 2.07
RAB4A-202ENST00000473894 GLI2P10070 1586 aa27.94■■■□□ 2.06
RAB4A-202ENST00000473894 TROQ12816 1431 aaPredicted RBP27.94■■■□□ 2.06
RAB4A-202ENST00000473894 MAGI3Q5TCQ9 1506 aa27.93■■■□□ 2.06
RAB4A-202ENST00000473894 KIF13AQ9H1H9 1805 aa27.91■■■□□ 2.06
RAB4A-202ENST00000473894 EHBP1L1Q8N3D4 1523 aa27.85■■■□□ 2.05
RAB4A-202ENST00000473894 ABCA9Q8IUA7 1624 aa27.85■■■□□ 2.05
RAB4A-202ENST00000473894 LRRC9Q6ZRR7 1453 aa27.84■■■□□ 2.05
RAB4A-202ENST00000473894 KIF14Q15058 1648 aa27.82■■■□□ 2.04
RAB4A-202ENST00000473894 APLP2Q06481 763 aa27.82■■■□□ 2.04
RAB4A-202ENST00000473894 FAM69CQ0P6D2 419 aa27.82■■■□□ 2.04
RAB4A-202ENST00000473894 KCNH8Q96L42 1107 aa27.82■■■□□ 2.04
RAB4A-202ENST00000473894 MTUS2Q5JR59 1369 aa27.82■■■□□ 2.04
RAB4A-202ENST00000473894 MAP3K4Q9Y6R4 1608 aa27.81■■■□□ 2.04
RAB4A-202ENST00000473894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.8■■■□□ 2.047e-7■■□□□ 14.3
RAB4A-202ENST00000473894 KANK4Q5T7N3 995 aaPredicted RBP27.77■■■□□ 2.04
RAB4A-202ENST00000473894 TTC37Q6PGP7 1564 aa27.75■■■□□ 2.03
RAB4A-202ENST00000473894 SUPT6HQ7KZ85 1726 aaKnown RBP27.72■■■□□ 2.03
RAB4A-202ENST00000473894 CD109Q6YHK3 1445 aa27.71■■■□□ 2.03
RAB4A-202ENST00000473894 ARAP3Q8WWN8 1544 aa27.69■■■□□ 2.02
RAB4A-202ENST00000473894 PPRC1Q5VV67 1664 aaKnown RBP27.68■■■□□ 2.02
RAB4A-202ENST00000473894 NCOA2Q15596 1464 aa27.67■■■□□ 2.02
RAB4A-202ENST00000473894 PLCH2O75038 1416 aa27.66■■■□□ 2.02
RAB4A-202ENST00000473894 MYO5CQ9NQX4 1742 aa27.65■■■□□ 2.02
RAB4A-202ENST00000473894 CDC42BPAQ5VT25 1732 aa27.63■■■□□ 2.01
RAB4A-202ENST00000473894 GPATCH8Q9UKJ3 1502 aaKnown RBP27.62■■■□□ 2.01
RAB4A-202ENST00000473894 PREX2Q70Z35 1606 aa27.62■■■□□ 2.01
RAB4A-202ENST00000473894 TEX14Q8IWB6 1497 aa27.61■■■□□ 2.01
RAB4A-202ENST00000473894 TSPOAP1O95153 1857 aa27.61■■■□□ 2.01
RAB4A-202ENST00000473894 CDC42BPBQ9Y5S2 1711 aa27.59■■■□□ 2.01
RAB4A-202ENST00000473894 CCNB3Q8WWL7 1395 aa27.58■■■□□ 2.01
RAB4A-202ENST00000473894 NEO1Q92859 1461 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms