RNA–Protein interactions for RNA: ENST00000472749.6

ZIC4-208, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-208ENST00000472749 PEG3Q9GZU2 1588 aa13.73□□□□□ -0.21
ZIC4-208ENST00000472749 SIN3AQ96ST3 1273 aa13.72□□□□□ -0.21
ZIC4-208ENST00000472749 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.21
ZIC4-208ENST00000472749 UBE2Q2Q8WVN8 375 aa13.71□□□□□ -0.21
ZIC4-208ENST00000472749 ARAP1Q96P48 1450 aa13.68□□□□□ -0.22
ZIC4-208ENST00000472749 KIF27Q86VH2 1401 aa13.68□□□□□ -0.22
ZIC4-208ENST00000472749 POLR3GLQ9BT43 218 aa13.67□□□□□ -0.22
ZIC4-208ENST00000472749 KCNH8Q96L42 1107 aa13.66□□□□□ -0.22
ZIC4-208ENST00000472749 TOP2BQ02880 1626 aa13.66□□□□□ -0.22
ZIC4-208ENST00000472749 CCNB3Q8WWL7 1395 aa13.65□□□□□ -0.22
ZIC4-208ENST00000472749 PRXQ9BXM0 1461 aa13.64□□□□□ -0.23
ZIC4-208ENST00000472749 TRIM52Q96A61 297 aa13.64□□□□□ -0.23
ZIC4-208ENST00000472749 IL27Q8NEV9 243 aa13.63□□□□□ -0.23
ZIC4-208ENST00000472749 CHIC2Q9UKJ5 165 aa13.63□□□□□ -0.23
ZIC4-208ENST00000472749 MYT1LQ9UL68 1186 aa13.62□□□□□ -0.23
ZIC4-208ENST00000472749 CUX1P39880 1505 aa13.59□□□□□ -0.23
ZIC4-208ENST00000472749 RAB3GAP2Q9H2M9 1393 aa13.58□□□□□ -0.24
ZIC4-208ENST00000472749 CUX2O14529 1486 aa13.57□□□□□ -0.24
ZIC4-208ENST00000472749 ARHGAP35Q9NRY4 1499 aa13.56□□□□□ -0.24
ZIC4-208ENST00000472749 ERICH3Q5RHP9 1530 aa13.56□□□□□ -0.24
ZIC4-208ENST00000472749 CDK11AQ9UQ88 783 aaPredicted RBP13.56□□□□□ -0.24
ZIC4-208ENST00000472749 SENP3-EIF4A1A0A087X0R7 540 aa13.55□□□□□ -0.24
ZIC4-208ENST00000472749 ERICH6BQ5W0A0 696 aa13.55□□□□□ -0.24
ZIC4-208ENST00000472749 PKNOX2Q96KN3 472 aa13.54□□□□□ -0.24
ZIC4-208ENST00000472749 RRBP1Q9P2E9 1410 aaKnown RBP13.54□□□□□ -0.24
ZIC4-208ENST00000472749 PLEKHG5O94827 1062 aa13.52□□□□□ -0.24
ZIC4-208ENST00000472749 IGF1RP08069 1367 aa13.52□□□□□ -0.24
ZIC4-208ENST00000472749 CARMIL1Q5VZK9 1371 aa13.52□□□□□ -0.24
ZIC4-208ENST00000472749 ZNF326Q5BKZ1 582 aaKnown RBP13.52□□□□□ -0.25
ZIC4-208ENST00000472749 RTL5Q5HYW3 569 aaPredicted RBP13.52□□□□□ -0.25
ZIC4-208ENST00000472749 RRP7BPQ9NSQ0 103 aa13.52□□□□□ -0.25
ZIC4-208ENST00000472749 ANP32CO43423 234 aa13.52□□□□□ -0.25
ZIC4-208ENST00000472749 NCAPD3P42695 1498 aa13.52□□□□□ -0.25
ZIC4-208ENST00000472749 IRX6P78412 446 aaPredicted RBP13.51□□□□□ -0.25
ZIC4-208ENST00000472749 FANCIQ9NVI1 1328 aa13.51□□□□□ -0.25
ZIC4-208ENST00000472749 BIVM-ERCC5R4GMW8 1640 aa13.5□□□□□ -0.25
ZIC4-208ENST00000472749 FBLN2P98095 1184 aa13.49□□□□□ -0.25
ZIC4-208ENST00000472749 CFTRP13569 1480 aa13.48□□□□□ -0.25
ZIC4-208ENST00000472749 PHLDB1Q86UU1 1377 aa13.47□□□□□ -0.25
ZIC4-208ENST00000472749 SETD5Q9C0A6 1442 aa13.46□□□□□ -0.25
ZIC4-208ENST00000472749 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
ZIC4-208ENST00000472749 MTUS2Q5JR59 1369 aa13.43□□□□□ -0.26
ZIC4-208ENST00000472749 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
ZIC4-208ENST00000472749 ZNF777Q9ULD5 760 aaPredicted RBP13.43□□□□□ -0.26
ZIC4-208ENST00000472749 FOXD1Q16676 465 aa13.42□□□□□ -0.26
ZIC4-208ENST00000472749 FHOD3Q2V2M9 1422 aa13.41□□□□□ -0.26
ZIC4-208ENST00000472749 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
ZIC4-208ENST00000472749 HNRNPUQ00839 825 aaKnown RBP eCLIP13.41□□□□□ -0.26
ZIC4-208ENST00000472749 NOP58Q9Y2X3 529 aaKnown RBP13.41□□□□□ -0.26
ZIC4-208ENST00000472749 HMGXB3Q12766 1538 aa13.41□□□□□ -0.26
ZIC4-208ENST00000472749 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
ZIC4-208ENST00000472749 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
ZIC4-208ENST00000472749 FGD5Q6ZNL6 1462 aa13.4□□□□□ -0.26
ZIC4-208ENST00000472749 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.27
ZIC4-208ENST00000472749 LRRC9Q6ZRR7 1453 aa13.39□□□□□ -0.27
ZIC4-208ENST00000472749 FAM9BQ8IZU0 186 aa13.38□□□□□ -0.27
ZIC4-208ENST00000472749 PODXL2Q9NZ53 605 aa13.38□□□□□ -0.27
ZIC4-208ENST00000472749 MAPKBP1O60336 1514 aa13.37□□□□□ -0.27
ZIC4-208ENST00000472749 WDR97A6NE52 1622 aa13.36□□□□□ -0.27
ZIC4-208ENST00000472749 TIAM1Q13009 1591 aa13.36□□□□□ -0.27
ZIC4-208ENST00000472749 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
ZIC4-208ENST00000472749 PPP1R15AO75807 674 aaPredicted RBP13.36□□□□□ -0.27
ZIC4-208ENST00000472749 RAD54L2Q9Y4B4 1467 aa13.34□□□□□ -0.27
ZIC4-208ENST00000472749 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
ZIC4-208ENST00000472749 FANCD2Q9BXW9 1451 aa13.28□□□□□ -0.28
ZIC4-208ENST00000472749 PCF11O94913 1555 aaKnown RBP13.26□□□□□ -0.29
ZIC4-208ENST00000472749 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
ZIC4-208ENST00000472749 NESP48681 1621 aa13.24□□□□□ -0.29
ZIC4-208ENST00000472749 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
ZIC4-208ENST00000472749 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
ZIC4-208ENST00000472749 BRPF3Q9ULD4 1205 aa13.24□□□□□ -0.29
ZIC4-208ENST00000472749 B4GALNT3Q6L9W6 998 aa13.22□□□□□ -0.29
ZIC4-208ENST00000472749 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
ZIC4-208ENST00000472749 MAP3K1Q13233 1512 aa13.22□□□□□ -0.29
ZIC4-208ENST00000472749 MRS2Q9HD23 443 aa13.22□□□□□ -0.29
ZIC4-208ENST00000472749 ANP32AP39687 249 aaKnown RBP13.21□□□□□ -0.29
ZIC4-208ENST00000472749 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.29
ZIC4-208ENST00000472749 FGD6Q6ZV73 1430 aa13.21□□□□□ -0.29
ZIC4-208ENST00000472749 CCER2I3L3R5 266 aa13.21□□□□□ -0.29
ZIC4-208ENST00000472749 HSPA5P11021 654 aaKnown RBP13.2□□□□□ -0.3
ZIC4-208ENST00000472749 GLIPR1L2Q4G1C9 344 aa13.2□□□□□ -0.3
ZIC4-208ENST00000472749 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
ZIC4-208ENST00000472749 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
ZIC4-208ENST00000472749 EIF4G2P78344 907 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZIC4-208ENST00000472749 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
ZIC4-208ENST00000472749 ZMYND15Q9H091 742 aa13.19□□□□□ -0.3
ZIC4-208ENST00000472749 FMN1Q68DA7 1419 aa13.19□□□□□ -0.3
ZIC4-208ENST00000472749 NEFMP07197 916 aa13.18□□□□□ -0.3
ZIC4-208ENST00000472749 NPM2Q86SE8 214 aaKnown RBP13.18□□□□□ -0.3
ZIC4-208ENST00000472749 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
ZIC4-208ENST00000472749 DAXXQ9UER7 740 aaPredicted RBP13.18□□□□□ -0.3
ZIC4-208ENST00000472749 FYCO1Q9BQS8 1478 aa13.17□□□□□ -0.3
ZIC4-208ENST00000472749 TOPBP1Q92547 1522 aa13.15□□□□□ -0.3
ZIC4-208ENST00000472749 A0A0U1RQG5 324 aaPredicted RBP13.15□□□□□ -0.3
ZIC4-208ENST00000472749 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
ZIC4-208ENST00000472749 CC2D2AQ9P2K1 1620 aa13.14□□□□□ -0.31
ZIC4-208ENST00000472749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.31
ZIC4-208ENST00000472749 ZNF644Q9H582 1327 aaPredicted RBP13.13□□□□□ -0.31
ZIC4-208ENST00000472749 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
ZIC4-208ENST00000472749 MPHOSPH9Q99550 1183 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms