RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 SHROOM2Q13796 1616 aa32.99■■■□□ 2.87
SF1-213ENST00000472725 ARHGEF11O15085 1522 aa32.93■■■□□ 2.86
SF1-213ENST00000472725 CTTNBP2Q8WZ74 1663 aa32.91■■■□□ 2.86
SF1-213ENST00000472725 JPH4Q96JJ6 628 aa32.91■■■□□ 2.86
SF1-213ENST00000472725 IQGAP2Q13576 1575 aa32.91■■■□□ 2.86
SF1-213ENST00000472725 RIMBP3CA6NJZ7 1639 aa32.88■■■□□ 2.85
SF1-213ENST00000472725 RIMBP3BA6NNM3 1639 aa32.88■■■□□ 2.85
SF1-213ENST00000472725 RIMBP3Q9UFD9 1639 aa32.88■■■□□ 2.85
SF1-213ENST00000472725 GOLGA3Q08378 1498 aa32.82■■■□□ 2.84
SF1-213ENST00000472725 PRG4Q92954 1404 aaPredicted RBP32.79■■■□□ 2.84
SF1-213ENST00000472725 UGGT2Q9NYU1 1516 aa32.77■■■□□ 2.84
SF1-213ENST00000472725 CARMIL2Q6F5E8 1435 aa32.7■■■□□ 2.83
SF1-213ENST00000472725 ERCC6L2Q5T890 1561 aa32.7■■■□□ 2.82
SF1-213ENST00000472725 ARAP1Q96P48 1450 aa32.67■■■□□ 2.82
SF1-213ENST00000472725 UBTFP17480 764 aaKnown RBP32.65■■■□□ 2.82
SF1-213ENST00000472725 DISP1Q96F81 1524 aa32.61■■■□□ 2.81
SF1-213ENST00000472725 KIAA0556O60303 1618 aa32.57■■■□□ 2.8
SF1-213ENST00000472725 CYB5RLQ6IPT4 315 aa32.56■■■□□ 2.8
SF1-213ENST00000472725 TNIKQ9UKE5 1360 aa32.55■■■□□ 2.8
SF1-213ENST00000472725 EHMT2Q96KQ7 1210 aa32.51■■■□□ 2.79
SF1-213ENST00000472725 SAMD9Q5K651 1589 aa32.5■■■□□ 2.79
SF1-213ENST00000472725 EFCAB5A4FU69 1503 aa32.47■■■□□ 2.79
SF1-213ENST00000472725 PTPRGP23470 1445 aa32.47■■■□□ 2.79
SF1-213ENST00000472725 RANGAP1P46060 587 aaPredicted RBP32.31■■■□□ 2.76
SF1-213ENST00000472725 UHRF1BP1LA0JNW5 1464 aa32.29■■■□□ 2.76
SF1-213ENST00000472725 UACAQ9BZF9 1416 aa32.28■■■□□ 2.76
SF1-213ENST00000472725 ARHGAP35Q9NRY4 1499 aa32.28■■■□□ 2.76
SF1-213ENST00000472725 P3H3Q8IVL6 736 aa32.27■■■□□ 2.76
SF1-213ENST00000472725 LOC105371045A0A1W2PR82 267 aa32.25■■■□□ 2.75
SF1-213ENST00000472725 ADCY10Q96PN6 1610 aa32.24■■■□□ 2.75
SF1-213ENST00000472725 FHOD3Q2V2M9 1422 aa32.24■■■□□ 2.75
SF1-213ENST00000472725 TTBK1Q5TCY1 1321 aaPredicted RBP32.24■■■□□ 2.75
SF1-213ENST00000472725 ABCC2Q92887 1545 aa32.22■■■□□ 2.75
SF1-213ENST00000472725 CLIP1P30622 1438 aa32.22■■■□□ 2.75
SF1-213ENST00000472725 ABCA8O94911 1581 aa32.2■■■□□ 2.75
SF1-213ENST00000472725 FMN1Q68DA7 1419 aa32.17■■■□□ 2.74
SF1-213ENST00000472725 PLB1Q6P1J6 1458 aa32.16■■■□□ 2.74
SF1-213ENST00000472725 NPM1P06748 294 aaKnown RBP eCLIP32.16■■■□□ 2.74
SF1-213ENST00000472725 CEP162Q5TB80 1403 aa32.15■■■□□ 2.74
SF1-213ENST00000472725 RAPGEF6Q8TEU7 1601 aa32.11■■■□□ 2.73
SF1-213ENST00000472725 KDM5BQ9UGL1 1544 aa32.1■■■□□ 2.73
SF1-213ENST00000472725 MAPKBP1O60336 1514 aa32.05■■■□□ 2.72
SF1-213ENST00000472725 ZCCHC11Q5TAX3 1644 aaKnown RBP31.99■■■□□ 2.71
SF1-213ENST00000472725 NUP153P49790 1475 aaKnown RBP31.97■■■□□ 2.71
SF1-213ENST00000472725 HECW1Q76N89 1606 aa31.94■■■□□ 2.7
SF1-213ENST00000472725 ATP10BO94823 1461 aa31.92■■■□□ 2.7
SF1-213ENST00000472725 CASKIN1Q8WXD9 1431 aa31.92■■■□□ 2.7
SF1-213ENST00000472725 FYCO1Q9BQS8 1478 aa31.87■■■□□ 2.69
SF1-213ENST00000472725 ASXL2Q76L83 1435 aa31.87■■■□□ 2.69
SF1-213ENST00000472725 PCF11O94913 1555 aaKnown RBP31.85■■■□□ 2.69
SF1-213ENST00000472725 EPRSP07814 1512 aaKnown RBP31.82■■■□□ 2.68
SF1-213ENST00000472725 ABCC10Q5T3U5 1492 aa31.82■■■□□ 2.68
SF1-213ENST00000472725 WDR7Q9Y4E6 1490 aa31.8■■■□□ 2.68
SF1-213ENST00000472725 CCDC18Q5T9S5 1454 aa31.79■■■□□ 2.68
SF1-213ENST00000472725 VPS8Q8N3P4 1428 aa31.78■■■□□ 2.68
SF1-213ENST00000472725 ATP1B4Q9UN42 357 aaPredicted RBP31.78■■■□□ 2.68
SF1-213ENST00000472725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.76■■■□□ 2.67
SF1-213ENST00000472725 TRHP20396 242 aaPredicted RBP31.76■■■□□ 2.67
SF1-213ENST00000472725 HNRNPUL2Q1KMD3 747 aaKnown RBP31.76■■■□□ 2.67
SF1-213ENST00000472725 ARID3CA6NKF2 412 aa31.75■■■□□ 2.67
SF1-213ENST00000472725 DIP2BQ9P265 1576 aa31.75■■■□□ 2.67
SF1-213ENST00000472725 KIF13AQ9H1H9 1805 aa31.73■■■□□ 2.67
SF1-213ENST00000472725 GLI2P10070 1586 aa31.73■■■□□ 2.67
SF1-213ENST00000472725 CDK13Q14004 1512 aaKnown RBP31.72■■■□□ 2.67
SF1-213ENST00000472725 PLEKHD1A6NEE1 506 aa31.72■■■□□ 2.67
SF1-213ENST00000472725 CDK11AQ9UQ88 783 aaPredicted RBP31.72■■■□□ 2.67
SF1-213ENST00000472725 LRRIQ1Q96JM4 1722 aa31.72■■■□□ 2.67
SF1-213ENST00000472725 FAM69CQ0P6D2 419 aa31.67■■■□□ 2.66
SF1-213ENST00000472725 KCNH8Q96L42 1107 aa31.58■■■□□ 2.65
SF1-213ENST00000472725 TROQ12816 1431 aaPredicted RBP31.57■■■□□ 2.64
SF1-213ENST00000472725 CFAP43Q8NDM7 1665 aa31.56■■■□□ 2.64
SF1-213ENST00000472725 MAP3K4Q9Y6R4 1608 aa31.56■■■□□ 2.64
SF1-213ENST00000472725 MAP3K1Q13233 1512 aa31.54■■■□□ 2.64
SF1-213ENST00000472725 ABCA9Q8IUA7 1624 aa31.53■■■□□ 2.64
SF1-213ENST00000472725 TIAM1Q13009 1591 aa31.48■■■□□ 2.63
SF1-213ENST00000472725 KIF14Q15058 1648 aa31.48■■■□□ 2.63
SF1-213ENST00000472725 CD109Q6YHK3 1445 aa31.46■■■□□ 2.63
SF1-213ENST00000472725 MAGI3Q5TCQ9 1506 aa31.45■■■□□ 2.63
SF1-213ENST00000472725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.44■■■□□ 2.622e-8■■■■□ 24.3
SF1-213ENST00000472725 MTUS2Q5JR59 1369 aa31.43■■■□□ 2.62
SF1-213ENST00000472725 APLP2Q06481 763 aa31.43■■■□□ 2.62
SF1-213ENST00000472725 TSPOAP1O95153 1857 aa31.42■■■□□ 2.62
SF1-213ENST00000472725 TEX14Q8IWB6 1497 aa31.42■■■□□ 2.62
SF1-213ENST00000472725 EHBP1L1Q8N3D4 1523 aa31.42■■■□□ 2.62
SF1-213ENST00000472725 PPRC1Q5VV67 1664 aaKnown RBP31.4■■■□□ 2.62
SF1-213ENST00000472725 TTC37Q6PGP7 1564 aa31.36■■■□□ 2.61
SF1-213ENST00000472725 LRRC9Q6ZRR7 1453 aa31.34■■■□□ 2.61
SF1-213ENST00000472725 ARAP3Q8WWN8 1544 aa31.33■■■□□ 2.61
SF1-213ENST00000472725 MYO5CQ9NQX4 1742 aa31.31■■■□□ 2.6
SF1-213ENST00000472725 PHLDB1Q86UU1 1377 aa31.3■■■□□ 2.6
SF1-213ENST00000472725 PLCH2O75038 1416 aa31.3■■■□□ 2.6
SF1-213ENST00000472725 SUPT6HQ7KZ85 1726 aaKnown RBP31.28■■■□□ 2.6
SF1-213ENST00000472725 NEO1Q92859 1461 aa31.27■■■□□ 2.6
SF1-213ENST00000472725 CFAP74Q9C0B2 1584 aa31.26■■■□□ 2.6
SF1-213ENST00000472725 PREX2Q70Z35 1606 aa31.21■■■□□ 2.59
SF1-213ENST00000472725 KANK4Q5T7N3 995 aaPredicted RBP31.21■■■□□ 2.59
SF1-213ENST00000472725 FANCAO15360 1455 aa31.21■■■□□ 2.59
SF1-213ENST00000472725 CDC42BPAQ5VT25 1732 aa31.2■■■□□ 2.58
SF1-213ENST00000472725 NCOA2Q15596 1464 aa31.19■■■□□ 2.58
SF1-213ENST00000472725 CCNB3Q8WWL7 1395 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms