RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 CHD1O14646 1710 aa9.43□□□□□ -0.9
EPHA4-212ENST00000472696 FBLN2P98095 1184 aa9.43□□□□□ -0.9
EPHA4-212ENST00000472696 OSCARQ8IYS5 282 aa9.42□□□□□ -0.9
EPHA4-212ENST00000472696 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
EPHA4-212ENST00000472696 CEP170Q5SW79 1584 aa9.4□□□□□ -0.9
EPHA4-212ENST00000472696 EHMT2Q96KQ7 1210 aa9.39□□□□□ -0.91
EPHA4-212ENST00000472696 EFCAB5A4FU69 1503 aa9.39□□□□□ -0.91
EPHA4-212ENST00000472696 UGGT2Q9NYU1 1516 aa9.38□□□□□ -0.91
EPHA4-212ENST00000472696 LOC105371045A0A1W2PR82 267 aa9.38□□□□□ -0.91
EPHA4-212ENST00000472696 CLASP1Q7Z460 1538 aa9.37□□□□□ -0.91
EPHA4-212ENST00000472696 JPH4Q96JJ6 628 aa9.37□□□□□ -0.91
EPHA4-212ENST00000472696 CARMIL2Q6F5E8 1435 aa9.36□□□□□ -0.91
EPHA4-212ENST00000472696 SHROOM2Q13796 1616 aa9.35□□□□□ -0.91
EPHA4-212ENST00000472696 CEP162Q5TB80 1403 aa9.34□□□□□ -0.91
EPHA4-212ENST00000472696 SAMD9Q5K651 1589 aa9.33□□□□□ -0.92
EPHA4-212ENST00000472696 CLIP1P30622 1438 aa9.33□□□□□ -0.92
EPHA4-212ENST00000472696 FMN1Q68DA7 1419 aa9.31□□□□□ -0.92
EPHA4-212ENST00000472696 ARHGAP35Q9NRY4 1499 aa9.3□□□□□ -0.92
EPHA4-212ENST00000472696 KIAA0556O60303 1618 aa9.3□□□□□ -0.92
EPHA4-212ENST00000472696 DISP1Q96F81 1524 aa9.3□□□□□ -0.92
EPHA4-212ENST00000472696 PRG4Q92954 1404 aaPredicted RBP9.29□□□□□ -0.92
EPHA4-212ENST00000472696 VPS8Q8N3P4 1428 aa9.25□□□□□ -0.93
EPHA4-212ENST00000472696 PTPRGP23470 1445 aa9.24□□□□□ -0.93
EPHA4-212ENST00000472696 ARAP1Q96P48 1450 aa9.24□□□□□ -0.93
EPHA4-212ENST00000472696 FHOD3Q2V2M9 1422 aa9.22□□□□□ -0.93
EPHA4-212ENST00000472696 CASKIN1Q8WXD9 1431 aa9.22□□□□□ -0.93
EPHA4-212ENST00000472696 FYCO1Q9BQS8 1478 aa9.21□□□□□ -0.93
EPHA4-212ENST00000472696 ARHGEF11O15085 1522 aa9.21□□□□□ -0.93
EPHA4-212ENST00000472696 MAP3K1Q13233 1512 aa9.21□□□□□ -0.93
EPHA4-212ENST00000472696 RANGAP1P46060 587 aaPredicted RBP9.21□□□□□ -0.94
EPHA4-212ENST00000472696 UHRF1BP1LA0JNW5 1464 aa9.21□□□□□ -0.94
EPHA4-212ENST00000472696 APLP2Q06481 763 aa9.19□□□□□ -0.94
EPHA4-212ENST00000472696 P3H3Q8IVL6 736 aa9.19□□□□□ -0.94
EPHA4-212ENST00000472696 UACAQ9BZF9 1416 aa9.19□□□□□ -0.94
EPHA4-212ENST00000472696 CCDC18Q5T9S5 1454 aa9.19□□□□□ -0.94
EPHA4-212ENST00000472696 ABCA8O94911 1581 aa9.19□□□□□ -0.94
EPHA4-212ENST00000472696 HECW1Q76N89 1606 aa9.19□□□□□ -0.94
EPHA4-212ENST00000472696 RAPGEF6Q8TEU7 1601 aa9.19□□□□□ -0.94
EPHA4-212ENST00000472696 RIMBP3CA6NJZ7 1639 aa9.17□□□□□ -0.94
EPHA4-212ENST00000472696 RIMBP3BA6NNM3 1639 aa9.17□□□□□ -0.94
EPHA4-212ENST00000472696 RIMBP3Q9UFD9 1639 aa9.17□□□□□ -0.94
EPHA4-212ENST00000472696 ERCC6L2Q5T890 1561 aa9.17□□□□□ -0.94
EPHA4-212ENST00000472696 ABCC2Q92887 1545 aa9.17□□□□□ -0.94
EPHA4-212ENST00000472696 CDK11AQ9UQ88 783 aaPredicted RBP9.17□□□□□ -0.94
EPHA4-212ENST00000472696 DNAJC5Q9H3Z4 198 aa9.16□□□□□ -0.94
EPHA4-212ENST00000472696 PCF11O94913 1555 aaKnown RBP9.15□□□□□ -0.95
EPHA4-212ENST00000472696 PLB1Q6P1J6 1458 aa9.15□□□□□ -0.95
EPHA4-212ENST00000472696 EPRSP07814 1512 aaKnown RBP9.14□□□□□ -0.95
EPHA4-212ENST00000472696 KDM5BQ9UGL1 1544 aa9.14□□□□□ -0.95
EPHA4-212ENST00000472696 NUP153P49790 1475 aaKnown RBP9.14□□□□□ -0.95
EPHA4-212ENST00000472696 NPM1P06748 294 aaKnown RBP eCLIP9.13□□□□□ -0.95
EPHA4-212ENST00000472696 TIAM1Q13009 1591 aa9.11□□□□□ -0.95
EPHA4-212ENST00000472696 CFAP43Q8NDM7 1665 aa9.1□□□□□ -0.95
EPHA4-212ENST00000472696 ATP10BO94823 1461 aa9.1□□□□□ -0.95
EPHA4-212ENST00000472696 ADCY10Q96PN6 1610 aa9.1□□□□□ -0.95
EPHA4-212ENST00000472696 PLEKHD1A6NEE1 506 aa9.1□□□□□ -0.95
EPHA4-212ENST00000472696 CYB5RLQ6IPT4 315 aa9.09□□□□□ -0.95
EPHA4-212ENST00000472696 ATP1B4Q9UN42 357 aaPredicted RBP9.09□□□□□ -0.95
EPHA4-212ENST00000472696 SENP3Q9H4L4 574 aaPredicted RBP9.08□□□□□ -0.96
EPHA4-212ENST00000472696 EHBP1L1Q8N3D4 1523 aa9.08□□□□□ -0.96
EPHA4-212ENST00000472696 LRRC9Q6ZRR7 1453 aa9.08□□□□□ -0.96
EPHA4-212ENST00000472696 TTBK1Q5TCY1 1321 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-212ENST00000472696 MAPKBP1O60336 1514 aa9.07□□□□□ -0.96
EPHA4-212ENST00000472696 ZCCHC11Q5TAX3 1644 aaKnown RBP9.07□□□□□ -0.96
EPHA4-212ENST00000472696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-212ENST00000472696 HNRNPUL2Q1KMD3 747 aaKnown RBP9.07□□□□□ -0.96
EPHA4-212ENST00000472696 LRRIQ1Q96JM4 1722 aa9.07□□□□□ -0.96
EPHA4-212ENST00000472696 MTUS2Q5JR59 1369 aa9.07□□□□□ -0.96
EPHA4-212ENST00000472696 TROQ12816 1431 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-212ENST00000472696 CDK13Q14004 1512 aaKnown RBP9.05□□□□□ -0.96
EPHA4-212ENST00000472696 SUPT6HQ7KZ85 1726 aaKnown RBP9.04□□□□□ -0.96
EPHA4-212ENST00000472696 WDR7Q9Y4E6 1490 aa9.03□□□□□ -0.96
EPHA4-212ENST00000472696 KIF14Q15058 1648 aa9.02□□□□□ -0.96
EPHA4-212ENST00000472696 KANK4Q5T7N3 995 aaPredicted RBP9.02□□□□□ -0.97
EPHA4-212ENST00000472696 ASXL2Q76L83 1435 aa9.02□□□□□ -0.97
EPHA4-212ENST00000472696 PHF23Q9BUL5 403 aaPredicted RBP9.01□□□□□ -0.97
EPHA4-212ENST00000472696 MIA2Q96PC5 1412 aa9□□□□□ -0.97
EPHA4-212ENST00000472696 MAGI3Q5TCQ9 1506 aa9□□□□□ -0.97
EPHA4-212ENST00000472696 ARAP3Q8WWN8 1544 aa9□□□□□ -0.97
EPHA4-212ENST00000472696 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.99□□□□□ -0.97
EPHA4-212ENST00000472696 GLI2P10070 1586 aa8.99□□□□□ -0.97
EPHA4-212ENST00000472696 NCOA2Q15596 1464 aa8.99□□□□□ -0.97
EPHA4-212ENST00000472696 ABCA9Q8IUA7 1624 aa8.98□□□□□ -0.97
EPHA4-212ENST00000472696 ITSN2Q9NZM3 1697 aa8.98□□□□□ -0.97
EPHA4-212ENST00000472696 CCNB3Q8WWL7 1395 aa8.98□□□□□ -0.97
EPHA4-212ENST00000472696 ABCC10Q5T3U5 1492 aa8.97□□□□□ -0.97
EPHA4-212ENST00000472696 PHLDB1Q86UU1 1377 aa8.97□□□□□ -0.97
EPHA4-212ENST00000472696 MYOM3Q5VTT5 1437 aa8.97□□□□□ -0.97
EPHA4-212ENST00000472696 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.96□□□□□ -0.97
EPHA4-212ENST00000472696 ARID3CA6NKF2 412 aa8.96□□□□□ -0.98
EPHA4-212ENST00000472696 RSPH4AQ5TD94 716 aa8.96□□□□□ -0.98
EPHA4-212ENST00000472696 PLPPR3Q6T4P5 718 aa8.96□□□□□ -0.98
EPHA4-212ENST00000472696 PLCH2O75038 1416 aa8.96□□□□□ -0.98
EPHA4-212ENST00000472696 RRBP1Q9P2E9 1410 aaKnown RBP8.96□□□□□ -0.98
EPHA4-212ENST00000472696 MYO5CQ9NQX4 1742 aa8.95□□□□□ -0.98
EPHA4-212ENST00000472696 GPATCH8Q9UKJ3 1502 aaKnown RBP8.95□□□□□ -0.98
EPHA4-212ENST00000472696 KCNH8Q96L42 1107 aa8.94□□□□□ -0.98
EPHA4-212ENST00000472696 PLEKHH2Q8IVE3 1493 aa8.94□□□□□ -0.98
EPHA4-212ENST00000472696 DIP2BQ9P265 1576 aa8.94□□□□□ -0.98
EPHA4-212ENST00000472696 PREX2Q70Z35 1606 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms