RNA–Protein interactions for RNA: ENST00000472429.1

GRIK1-208, Transcript of glutamate ionotropic receptor kainate type subunit 1, humanhuman

TSL 1 (best)

Gene GRIK1, Length 1,775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1-208ENST00000472429 CHMP7Q8WUX9 453 aaPredicted RBP24.9■■□□□ 1.58
GRIK1-208ENST00000472429 TTBK1Q5TCY1 1321 aaPredicted RBP24.9■■□□□ 1.58
GRIK1-208ENST00000472429 SYNJ2O15056 1496 aa24.87■■□□□ 1.57
GRIK1-208ENST00000472429 PRXQ9BXM0 1461 aa24.87■■□□□ 1.57
GRIK1-208ENST00000472429 ADAMTS12P58397 1594 aa24.86■■□□□ 1.57
GRIK1-208ENST00000472429 FHAD1B1AJZ9 1412 aa24.85■■□□□ 1.57
GRIK1-208ENST00000472429 CHD1O14646 1710 aa24.84■■□□□ 1.57
GRIK1-208ENST00000472429 OSCARQ8IYS5 282 aa24.82■■□□□ 1.56
GRIK1-208ENST00000472429 CARMIL1Q5VZK9 1371 aa24.79■■□□□ 1.56
GRIK1-208ENST00000472429 CUL7Q14999 1698 aa24.77■■□□□ 1.56
GRIK1-208ENST00000472429 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
GRIK1-208ENST00000472429 ARAP1Q96P48 1450 aa24.69■■□□□ 1.54
GRIK1-208ENST00000472429 APLP2Q06481 763 aa24.68■■□□□ 1.54
GRIK1-208ENST00000472429 DNAJC5Q9H3Z4 198 aa24.65■■□□□ 1.54
GRIK1-208ENST00000472429 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
GRIK1-208ENST00000472429 NUP160Q12769 1436 aa24.63■■□□□ 1.53
GRIK1-208ENST00000472429 DIEXFQ68CQ4 756 aaKnown RBP24.62■■□□□ 1.53
GRIK1-208ENST00000472429 SCAF1Q9H7N4 1312 aaKnown RBP24.59■■□□□ 1.53
GRIK1-208ENST00000472429 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
GRIK1-208ENST00000472429 HNRNPUL2Q1KMD3 747 aaKnown RBP24.56■■□□□ 1.52
GRIK1-208ENST00000472429 ZNF316A6NFI3 1004 aaPredicted RBP24.54■■□□□ 1.52
GRIK1-208ENST00000472429 KIAA0586Q9BVV6 1533 aa24.48■■□□□ 1.51
GRIK1-208ENST00000472429 ARHGAP35Q9NRY4 1499 aa24.46■■□□□ 1.51
GRIK1-208ENST00000472429 RANGAP1P46060 587 aaPredicted RBP24.46■■□□□ 1.51
GRIK1-208ENST00000472429 ACIN1Q9UKV3 1341 aaKnown RBP24.45■■□□□ 1.51
GRIK1-208ENST00000472429 RRBP1Q9P2E9 1410 aaKnown RBP24.44■■□□□ 1.5
GRIK1-208ENST00000472429 JPH4Q96JJ6 628 aa24.44■■□□□ 1.5
GRIK1-208ENST00000472429 CLSPNQ9HAW4 1339 aa24.42■■□□□ 1.5
GRIK1-208ENST00000472429 ARHGEF11O15085 1522 aa24.39■■□□□ 1.49
GRIK1-208ENST00000472429 IQGAP2Q13576 1575 aa24.38■■□□□ 1.49
GRIK1-208ENST00000472429 MAP3K1Q13233 1512 aa24.36■■□□□ 1.49
GRIK1-208ENST00000472429 SHROOM2Q13796 1616 aa24.36■■□□□ 1.49
GRIK1-208ENST00000472429 KANK4Q5T7N3 995 aaPredicted RBP24.36■■□□□ 1.49
GRIK1-208ENST00000472429 PRG4Q92954 1404 aaPredicted RBP24.35■■□□□ 1.49
GRIK1-208ENST00000472429 CENPBP07199 599 aaPredicted RBP24.35■■□□□ 1.49
GRIK1-208ENST00000472429 CTTNBP2Q8WZ74 1663 aa24.35■■□□□ 1.49
GRIK1-208ENST00000472429 RIMBP3CA6NJZ7 1639 aa24.34■■□□□ 1.49
GRIK1-208ENST00000472429 RIMBP3BA6NNM3 1639 aa24.34■■□□□ 1.49
GRIK1-208ENST00000472429 RIMBP3Q9UFD9 1639 aa24.34■■□□□ 1.49
GRIK1-208ENST00000472429 ERCC6L2Q5T890 1561 aa24.33■■□□□ 1.49
GRIK1-208ENST00000472429 NEUROD1Q13562 356 aa24.33■■□□□ 1.49
GRIK1-208ENST00000472429 DHX57Q6P158 1386 aaKnown RBP24.31■■□□□ 1.48
GRIK1-208ENST00000472429 TIAM1Q13009 1591 aa24.25■■□□□ 1.47
GRIK1-208ENST00000472429 UGGT2Q9NYU1 1516 aa24.25■■□□□ 1.47
GRIK1-208ENST00000472429 CCNB3Q8WWL7 1395 aa24.24■■□□□ 1.47
GRIK1-208ENST00000472429 PELP1Q8IZL8 1130 aaKnown RBP24.24■■□□□ 1.47
GRIK1-208ENST00000472429 CYB5RLQ6IPT4 315 aa24.22■■□□□ 1.47
GRIK1-208ENST00000472429 CARMIL2Q6F5E8 1435 aa24.22■■□□□ 1.47
GRIK1-208ENST00000472429 DISP1Q96F81 1524 aa24.21■■□□□ 1.47
GRIK1-208ENST00000472429 P3H3Q8IVL6 736 aa24.16■■□□□ 1.46
GRIK1-208ENST00000472429 CFAP43Q8NDM7 1665 aa24.15■■□□□ 1.46
GRIK1-208ENST00000472429 KIAA0556O60303 1618 aa24.15■■□□□ 1.46
GRIK1-208ENST00000472429 LRRC9Q6ZRR7 1453 aa24.12■■□□□ 1.45
GRIK1-208ENST00000472429 PTPRGP23470 1445 aa24.1■■□□□ 1.45
GRIK1-208ENST00000472429 EFCAB5A4FU69 1503 aa24.09■■□□□ 1.45
GRIK1-208ENST00000472429 SAMD9Q5K651 1589 aa24.08■■□□□ 1.45
GRIK1-208ENST00000472429 MIER1Q8N108 512 aa24.07■■□□□ 1.44
GRIK1-208ENST00000472429 PCF11O94913 1555 aaKnown RBP24.07■■□□□ 1.44
GRIK1-208ENST00000472429 GTF3C3Q9Y5Q9 886 aa24.06■■□□□ 1.44
GRIK1-208ENST00000472429 FHOD3Q2V2M9 1422 aa24.03■■□□□ 1.44
GRIK1-208ENST00000472429 FYCO1Q9BQS8 1478 aa24.02■■□□□ 1.44
GRIK1-208ENST00000472429 PHLDB1Q86UU1 1377 aa23.97■■□□□ 1.43
GRIK1-208ENST00000472429 RAB3GAP2Q9H2M9 1393 aa23.97■■□□□ 1.43
GRIK1-208ENST00000472429 CASKIN1Q8WXD9 1431 aa23.97■■□□□ 1.43
GRIK1-208ENST00000472429 MAPKBP1O60336 1514 aa23.95■■□□□ 1.42
GRIK1-208ENST00000472429 SETD5Q9C0A6 1442 aa23.94■■□□□ 1.42
GRIK1-208ENST00000472429 PLB1Q6P1J6 1458 aa23.94■■□□□ 1.42
GRIK1-208ENST00000472429 UACAQ9BZF9 1416 aa23.93■■□□□ 1.42
GRIK1-208ENST00000472429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.91■■□□□ 1.42
GRIK1-208ENST00000472429 ADCY10Q96PN6 1610 aa23.9■■□□□ 1.42
GRIK1-208ENST00000472429 ABCC2Q92887 1545 aa23.86■■□□□ 1.41
GRIK1-208ENST00000472429 ABCA8O94911 1581 aa23.86■■□□□ 1.41
GRIK1-208ENST00000472429 FMN1Q68DA7 1419 aa23.86■■□□□ 1.41
GRIK1-208ENST00000472429 YTHDC1Q96MU7 727 aaKnown RBP23.86■■□□□ 1.41
GRIK1-208ENST00000472429 UHRF1BP1LA0JNW5 1464 aa23.85■■□□□ 1.41
GRIK1-208ENST00000472429 ITGAEP38570 1179 aa23.85■■□□□ 1.41
GRIK1-208ENST00000472429 NPM1P06748 294 aaKnown RBP eCLIP23.83■■□□□ 1.41
GRIK1-208ENST00000472429 ARID3CA6NKF2 412 aa23.83■■□□□ 1.4
GRIK1-208ENST00000472429 RAPGEF6Q8TEU7 1601 aa23.8■■□□□ 1.4
GRIK1-208ENST00000472429 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
GRIK1-208ENST00000472429 KDM5BQ9UGL1 1544 aa23.75■■□□□ 1.39
GRIK1-208ENST00000472429 NUP153P49790 1475 aaKnown RBP23.74■■□□□ 1.39
GRIK1-208ENST00000472429 FAM50AQ14320 339 aaKnown RBP23.74■■□□□ 1.39
GRIK1-208ENST00000472429 FGD6Q6ZV73 1430 aa23.72■■□□□ 1.39
GRIK1-208ENST00000472429 TIMELESSQ9UNS1 1208 aa23.71■■□□□ 1.39
GRIK1-208ENST00000472429 ZCCHC11Q5TAX3 1644 aaKnown RBP23.71■■□□□ 1.39
GRIK1-208ENST00000472429 ATP10BO94823 1461 aa23.7■■□□□ 1.38
GRIK1-208ENST00000472429 LRRIQ1Q96JM4 1722 aa23.67■■□□□ 1.38
GRIK1-208ENST00000472429 HECW1Q76N89 1606 aa23.67■■□□□ 1.38
GRIK1-208ENST00000472429 ASXL2Q76L83 1435 aa23.66■■□□□ 1.38
GRIK1-208ENST00000472429 TRHP20396 242 aaPredicted RBP23.63■■□□□ 1.37
GRIK1-208ENST00000472429 CDK13Q14004 1512 aaKnown RBP23.63■■□□□ 1.37
GRIK1-208ENST00000472429 EHBP1L1Q8N3D4 1523 aa23.63■■□□□ 1.37
GRIK1-208ENST00000472429 EPRSP07814 1512 aaKnown RBP23.63■■□□□ 1.37
GRIK1-208ENST00000472429 MTUS2Q5JR59 1369 aa23.62■■□□□ 1.37
GRIK1-208ENST00000472429 SUPT6HQ7KZ85 1726 aaKnown RBP23.6■■□□□ 1.37
GRIK1-208ENST00000472429 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
GRIK1-208ENST00000472429 NCOA2Q15596 1464 aa23.59■■□□□ 1.37
GRIK1-208ENST00000472429 MYOM3Q5VTT5 1437 aa23.58■■□□□ 1.37
GRIK1-208ENST00000472429 WDR7Q9Y4E6 1490 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms