RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 SOGA1O94964 1423 aa19.8■□□□□ 0.76
SPC25-203ENST00000472216 WDR97A6NE52 1622 aa19.79■□□□□ 0.76
SPC25-203ENST00000472216 WIZO95785 1651 aa19.78■□□□□ 0.76
SPC25-203ENST00000472216 COL17A1Q9UMD9 1497 aaPredicted RBP19.7■□□□□ 0.74
SPC25-203ENST00000472216 PCF11O94913 1555 aaKnown RBP19.69■□□□□ 0.74
SPC25-203ENST00000472216 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
SPC25-203ENST00000472216 PTPRMP28827 1452 aa19.6■□□□□ 0.73
SPC25-203ENST00000472216 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
SPC25-203ENST00000472216 HSPA2P54652 639 aa19.56■□□□□ 0.72
SPC25-203ENST00000472216 NUP160Q12769 1436 aa19.56■□□□□ 0.72
SPC25-203ENST00000472216 PPRC1Q5VV67 1664 aaKnown RBP19.55■□□□□ 0.72
SPC25-203ENST00000472216 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
SPC25-203ENST00000472216 ADCY10Q96PN6 1610 aa19.53■□□□□ 0.72
SPC25-203ENST00000472216 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
SPC25-203ENST00000472216 GLI2P10070 1586 aa19.44■□□□□ 0.7
SPC25-203ENST00000472216 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
SPC25-203ENST00000472216 TEX14Q8IWB6 1497 aa19.44■□□□□ 0.7
SPC25-203ENST00000472216 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
SPC25-203ENST00000472216 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
SPC25-203ENST00000472216 PLB1Q6P1J6 1458 aa19.35■□□□□ 0.69
SPC25-203ENST00000472216 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
SPC25-203ENST00000472216 KIF21BO75037 1637 aa19.33■□□□□ 0.69
SPC25-203ENST00000472216 ADAMTSL3P82987 1691 aa19.33■□□□□ 0.68
SPC25-203ENST00000472216 ASXL2Q76L83 1435 aa19.31■□□□□ 0.68
SPC25-203ENST00000472216 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
SPC25-203ENST00000472216 MED1Q15648 1581 aaPredicted RBP19.26■□□□□ 0.67
SPC25-203ENST00000472216 MAP3K4Q9Y6R4 1608 aa19.22■□□□□ 0.67
SPC25-203ENST00000472216 IQSEC2Q5JU85 1478 aa19.21■□□□□ 0.67
SPC25-203ENST00000472216 KIAA0586Q9BVV6 1533 aa19.19■□□□□ 0.66
SPC25-203ENST00000472216 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
SPC25-203ENST00000472216 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
SPC25-203ENST00000472216 ABCA5Q8WWZ7 1642 aa19.17■□□□□ 0.66
SPC25-203ENST00000472216 YEATS2Q9ULM3 1422 aa19.16■□□□□ 0.66
SPC25-203ENST00000472216 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
SPC25-203ENST00000472216 ABCC2Q92887 1545 aa19.15■□□□□ 0.66
SPC25-203ENST00000472216 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
SPC25-203ENST00000472216 UBAP1LF5GYI3 381 aa19.13■□□□□ 0.65
SPC25-203ENST00000472216 MADDQ8WXG6 1647 aa19.13■□□□□ 0.65
SPC25-203ENST00000472216 ARID4BQ4LE39 1312 aaPredicted RBP19.12■□□□□ 0.65
SPC25-203ENST00000472216 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
SPC25-203ENST00000472216 SRCAPQ6ZRS2 3230 aa19.07■□□□□ 0.64
SPC25-203ENST00000472216 BCORL1Q5H9F3 1711 aa19.06■□□□□ 0.64
SPC25-203ENST00000472216 PTPRGP23470 1445 aa19.06■□□□□ 0.64
SPC25-203ENST00000472216 CUX1P39880 1505 aa19.05■□□□□ 0.64
SPC25-203ENST00000472216 TTBK1Q5TCY1 1321 aaPredicted RBP19.01■□□□□ 0.63
SPC25-203ENST00000472216 LTBP4Q8N2S1 1624 aa19.01■□□□□ 0.63
SPC25-203ENST00000472216 HSPA1LP34931 641 aa19.01■□□□□ 0.63
SPC25-203ENST00000472216 RIMS1Q86UR5 1692 aaKnown RBP19■□□□□ 0.63
SPC25-203ENST00000472216 PTPRTO14522 1441 aa18.98■□□□□ 0.63
SPC25-203ENST00000472216 MAGI3Q5TCQ9 1506 aa18.95■□□□□ 0.62
SPC25-203ENST00000472216 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
SPC25-203ENST00000472216 STRCQ7RTU9 1775 aa18.95■□□□□ 0.62
SPC25-203ENST00000472216 CUL7Q14999 1698 aa18.95■□□□□ 0.62
SPC25-203ENST00000472216 CD109Q6YHK3 1445 aa18.94■□□□□ 0.62
SPC25-203ENST00000472216 CFAP43Q8NDM7 1665 aa18.91■□□□□ 0.62
SPC25-203ENST00000472216 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
SPC25-203ENST00000472216 UHRF1BP1LA0JNW5 1464 aa18.88■□□□□ 0.61
SPC25-203ENST00000472216 ARAP3Q8WWN8 1544 aa18.88■□□□□ 0.61
SPC25-203ENST00000472216 TNIKQ9UKE5 1360 aa18.82■□□□□ 0.6
SPC25-203ENST00000472216 RGS17Q9UGC6 210 aaPredicted RBP18.82■□□□□ 0.6
SPC25-203ENST00000472216 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
SPC25-203ENST00000472216 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
SPC25-203ENST00000472216 KDM5BQ9UGL1 1544 aa18.8■□□□□ 0.6
SPC25-203ENST00000472216 PIP4K2BP78356 416 aa18.8■□□□□ 0.6
SPC25-203ENST00000472216 PREX1Q8TCU6 1659 aa18.78■□□□□ 0.6
SPC25-203ENST00000472216 POGZQ7Z3K3 1410 aa18.77■□□□□ 0.6
SPC25-203ENST00000472216 RAPGEF3O95398 923 aa18.77■□□□□ 0.6
SPC25-203ENST00000472216 WDR7Q9Y4E6 1490 aa18.77■□□□□ 0.59
SPC25-203ENST00000472216 IFFO2Q5TF58 517 aa18.76■□□□□ 0.59
SPC25-203ENST00000472216 KCNH8Q96L42 1107 aa18.74■□□□□ 0.59
SPC25-203ENST00000472216 TOM1O60784 492 aa18.72■□□□□ 0.59
SPC25-203ENST00000472216 UHRF1BP1Q6BDS2 1440 aa18.72■□□□□ 0.59
SPC25-203ENST00000472216 CARMIL2Q6F5E8 1435 aa18.72■□□□□ 0.59
SPC25-203ENST00000472216 PHLDB1Q86UU1 1377 aa18.71■□□□□ 0.59
SPC25-203ENST00000472216 WRNQ14191 1432 aaPredicted RBP eCLIP18.7■□□□□ 0.58
SPC25-203ENST00000472216 ZCCHC11Q5TAX3 1644 aaKnown RBP18.68■□□□□ 0.58
SPC25-203ENST00000472216 ZNF335Q9H4Z2 1342 aaPredicted RBP18.67■□□□□ 0.58
SPC25-203ENST00000472216 POTEAQ6S8J7 498 aa18.65■□□□□ 0.58
SPC25-203ENST00000472216 TTC37Q6PGP7 1564 aa18.64■□□□□ 0.58
SPC25-203ENST00000472216 MLECQ14165 292 aa18.64■□□□□ 0.57
SPC25-203ENST00000472216 CEBPAP49715 358 aaPredicted RBP18.62■□□□□ 0.57
SPC25-203ENST00000472216 UPF1Q92900 1129 aaKnown RBP eCLIP18.62■□□□□ 0.57
SPC25-203ENST00000472216 FANCAO15360 1455 aa18.62■□□□□ 0.57
SPC25-203ENST00000472216 FOXD1Q16676 465 aa18.55■□□□□ 0.56
SPC25-203ENST00000472216 SETD1BQ9UPS6 1966 aaKnown RBP18.55■□□□□ 0.56
SPC25-203ENST00000472216 FER1L4A9Z1Z3 1794 aa18.55■□□□□ 0.56
SPC25-203ENST00000472216 NCOA1Q15788 1441 aa18.53■□□□□ 0.56
SPC25-203ENST00000472216 ARHGEF40Q8TER5 1519 aa18.53■□□□□ 0.56
SPC25-203ENST00000472216 AKNAQ7Z591 1439 aa18.5■□□□□ 0.55
SPC25-203ENST00000472216 SETD1AO15047 1707 aaKnown RBP18.46■□□□□ 0.55
SPC25-203ENST00000472216 FRMPD1Q5SYB0 1578 aa18.46■□□□□ 0.55
SPC25-203ENST00000472216 NEO1Q92859 1461 aa18.45■□□□□ 0.54
SPC25-203ENST00000472216 KIAA0556O60303 1618 aa18.42■□□□□ 0.54
SPC25-203ENST00000472216 NCKAP5LQ9HCH0 1330 aa18.4■□□□□ 0.54
SPC25-203ENST00000472216 PTPRKQ15262 1439 aa18.39■□□□□ 0.53
SPC25-203ENST00000472216 ARHGEF12Q9NZN5 1544 aa18.38■□□□□ 0.53
SPC25-203ENST00000472216 SIGLEC1Q9BZZ2 1709 aa18.34■□□□□ 0.53
SPC25-203ENST00000472216 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.52
SPC25-203ENST00000472216 PKD2Q13563 968 aa18.32■□□□□ 0.52
SPC25-203ENST00000472216 CAMSAP1Q5T5Y3 1602 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms