RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 GOLGA3Q08378 1498 aa24.1■■□□□ 1.45
SMARCD3-207ENST00000472103 CTTNBP2Q8WZ74 1663 aa24.09■■□□□ 1.45
SMARCD3-207ENST00000472103 DNAJC5Q9H3Z4 198 aa24.05■■□□□ 1.44
SMARCD3-207ENST00000472103 IQGAP2Q13576 1575 aa24.04■■□□□ 1.44
SMARCD3-207ENST00000472103 SHROOM2Q13796 1616 aa24.04■■□□□ 1.44
SMARCD3-207ENST00000472103 JPH4Q96JJ6 628 aa24.01■■□□□ 1.43
SMARCD3-207ENST00000472103 ERCC6L2Q5T890 1561 aa23.99■■□□□ 1.43
SMARCD3-207ENST00000472103 LOC105371045A0A1W2PR82 267 aa23.99■■□□□ 1.43
SMARCD3-207ENST00000472103 UBTFP17480 764 aaKnown RBP23.99■■□□□ 1.43
SMARCD3-207ENST00000472103 ARHGEF11O15085 1522 aa23.95■■□□□ 1.43
SMARCD3-207ENST00000472103 PRG4Q92954 1404 aaPredicted RBP23.94■■□□□ 1.42
SMARCD3-207ENST00000472103 RIMBP3CA6NJZ7 1639 aa23.94■■□□□ 1.42
SMARCD3-207ENST00000472103 RIMBP3BA6NNM3 1639 aa23.94■■□□□ 1.42
SMARCD3-207ENST00000472103 RIMBP3Q9UFD9 1639 aa23.94■■□□□ 1.42
SMARCD3-207ENST00000472103 UGGT2Q9NYU1 1516 aa23.93■■□□□ 1.42
SMARCD3-207ENST00000472103 DISP1Q96F81 1524 aa23.89■■□□□ 1.41
SMARCD3-207ENST00000472103 RANGAP1P46060 587 aaPredicted RBP23.88■■□□□ 1.41
SMARCD3-207ENST00000472103 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
SMARCD3-207ENST00000472103 KIAA0556O60303 1618 aa23.84■■□□□ 1.41
SMARCD3-207ENST00000472103 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
SMARCD3-207ENST00000472103 SAMD9Q5K651 1589 aa23.81■■□□□ 1.4
SMARCD3-207ENST00000472103 CARMIL2Q6F5E8 1435 aa23.78■■□□□ 1.4
SMARCD3-207ENST00000472103 P3H3Q8IVL6 736 aa23.78■■□□□ 1.4
SMARCD3-207ENST00000472103 ARHGAP35Q9NRY4 1499 aa23.75■■□□□ 1.39
SMARCD3-207ENST00000472103 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
SMARCD3-207ENST00000472103 EFCAB5A4FU69 1503 aa23.71■■□□□ 1.39
SMARCD3-207ENST00000472103 FHOD3Q2V2M9 1422 aa23.71■■□□□ 1.39
SMARCD3-207ENST00000472103 CYB5RLQ6IPT4 315 aa23.7■■□□□ 1.38
SMARCD3-207ENST00000472103 PTPRGP23470 1445 aa23.68■■□□□ 1.38
SMARCD3-207ENST00000472103 CLIP1P30622 1438 aa23.68■■□□□ 1.38
SMARCD3-207ENST00000472103 CEP162Q5TB80 1403 aa23.68■■□□□ 1.38
SMARCD3-207ENST00000472103 PLB1Q6P1J6 1458 aa23.58■■□□□ 1.37
SMARCD3-207ENST00000472103 ABCA8O94911 1581 aa23.56■■□□□ 1.36
SMARCD3-207ENST00000472103 ADCY10Q96PN6 1610 aa23.55■■□□□ 1.36
SMARCD3-207ENST00000472103 UACAQ9BZF9 1416 aa23.54■■□□□ 1.36
SMARCD3-207ENST00000472103 ABCC2Q92887 1545 aa23.5■■□□□ 1.35
SMARCD3-207ENST00000472103 RAPGEF6Q8TEU7 1601 aa23.5■■□□□ 1.35
SMARCD3-207ENST00000472103 UHRF1BP1LA0JNW5 1464 aa23.49■■□□□ 1.35
SMARCD3-207ENST00000472103 FMN1Q68DA7 1419 aa23.48■■□□□ 1.35
SMARCD3-207ENST00000472103 PCF11O94913 1555 aaKnown RBP23.44■■□□□ 1.34
SMARCD3-207ENST00000472103 NUP153P49790 1475 aaKnown RBP23.43■■□□□ 1.34
SMARCD3-207ENST00000472103 ARID3CA6NKF2 412 aa23.42■■□□□ 1.34
SMARCD3-207ENST00000472103 KDM5BQ9UGL1 1544 aa23.39■■□□□ 1.34
SMARCD3-207ENST00000472103 LRRIQ1Q96JM4 1722 aa23.39■■□□□ 1.33
SMARCD3-207ENST00000472103 ZCCHC11Q5TAX3 1644 aaKnown RBP23.38■■□□□ 1.33
SMARCD3-207ENST00000472103 CASKIN1Q8WXD9 1431 aa23.38■■□□□ 1.33
SMARCD3-207ENST00000472103 ATP10BO94823 1461 aa23.36■■□□□ 1.33
SMARCD3-207ENST00000472103 VPS8Q8N3P4 1428 aa23.36■■□□□ 1.33
SMARCD3-207ENST00000472103 HECW1Q76N89 1606 aa23.36■■□□□ 1.33
SMARCD3-207ENST00000472103 ATP1B4Q9UN42 357 aaPredicted RBP23.35■■□□□ 1.33
SMARCD3-207ENST00000472103 CDK13Q14004 1512 aaKnown RBP23.33■■□□□ 1.33
SMARCD3-207ENST00000472103 FYCO1Q9BQS8 1478 aa23.32■■□□□ 1.32
SMARCD3-207ENST00000472103 NPM1P06748 294 aaKnown RBP eCLIP23.31■■□□□ 1.32
SMARCD3-207ENST00000472103 EPRSP07814 1512 aaKnown RBP23.3■■□□□ 1.32
SMARCD3-207ENST00000472103 MAPKBP1O60336 1514 aa23.28■■□□□ 1.32
SMARCD3-207ENST00000472103 ASXL2Q76L83 1435 aa23.25■■□□□ 1.31
SMARCD3-207ENST00000472103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
SMARCD3-207ENST00000472103 HNRNPUL2Q1KMD3 747 aaKnown RBP23.24■■□□□ 1.31
SMARCD3-207ENST00000472103 CCDC18Q5T9S5 1454 aa23.21■■□□□ 1.31
SMARCD3-207ENST00000472103 MAGI3Q5TCQ9 1506 aa23.18■■□□□ 1.3
SMARCD3-207ENST00000472103 WDR7Q9Y4E6 1490 aa23.18■■□□□ 1.3
SMARCD3-207ENST00000472103 CFAP43Q8NDM7 1665 aa23.16■■□□□ 1.3
SMARCD3-207ENST00000472103 TIAM1Q13009 1591 aa23.14■■□□□ 1.29
SMARCD3-207ENST00000472103 DIP2BQ9P265 1576 aa23.14■■□□□ 1.29
SMARCD3-207ENST00000472103 ABCC10Q5T3U5 1492 aa23.13■■□□□ 1.29
SMARCD3-207ENST00000472103 PLEKHD1A6NEE1 506 aa23.13■■□□□ 1.29
SMARCD3-207ENST00000472103 KIF13AQ9H1H9 1805 aa23.12■■□□□ 1.29
SMARCD3-207ENST00000472103 KCNH8Q96L42 1107 aa23.12■■□□□ 1.29
SMARCD3-207ENST00000472103 TROQ12816 1431 aaPredicted RBP23.09■■□□□ 1.29
SMARCD3-207ENST00000472103 MAP3K1Q13233 1512 aa23.08■■□□□ 1.28
SMARCD3-207ENST00000472103 FAM69CQ0P6D2 419 aa23.07■■□□□ 1.28
SMARCD3-207ENST00000472103 KANK4Q5T7N3 995 aaPredicted RBP23.07■■□□□ 1.28
SMARCD3-207ENST00000472103 KIF14Q15058 1648 aa23.07■■□□□ 1.28
SMARCD3-207ENST00000472103 CDK11AQ9UQ88 783 aaPredicted RBP23.06■■□□□ 1.28
SMARCD3-207ENST00000472103 TRHP20396 242 aaPredicted RBP23.05■■□□□ 1.28
SMARCD3-207ENST00000472103 GLI2P10070 1586 aa23.05■■□□□ 1.28
SMARCD3-207ENST00000472103 LRRC9Q6ZRR7 1453 aa23.02■■□□□ 1.28
SMARCD3-207ENST00000472103 EHBP1L1Q8N3D4 1523 aa23.02■■□□□ 1.28
SMARCD3-207ENST00000472103 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.02■■□□□ 1.28
SMARCD3-207ENST00000472103 MTUS2Q5JR59 1369 aa23.01■■□□□ 1.27
SMARCD3-207ENST00000472103 TTC37Q6PGP7 1564 aa23■■□□□ 1.27
SMARCD3-207ENST00000472103 ABCA9Q8IUA7 1624 aa23■■□□□ 1.27
SMARCD3-207ENST00000472103 APLP2Q06481 763 aa22.99■■□□□ 1.27
SMARCD3-207ENST00000472103 MAP3K4Q9Y6R4 1608 aa22.99■■□□□ 1.27
SMARCD3-207ENST00000472103 TSPOAP1O95153 1857 aa22.96■■□□□ 1.27
SMARCD3-207ENST00000472103 PPRC1Q5VV67 1664 aaKnown RBP22.95■■□□□ 1.26
SMARCD3-207ENST00000472103 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
SMARCD3-207ENST00000472103 CD109Q6YHK3 1445 aa22.92■■□□□ 1.26
SMARCD3-207ENST00000472103 SUPT6HQ7KZ85 1726 aaKnown RBP22.91■■□□□ 1.26
SMARCD3-207ENST00000472103 NCOA2Q15596 1464 aa22.91■■□□□ 1.26
SMARCD3-207ENST00000472103 CDC42BPAQ5VT25 1732 aa22.88■■□□□ 1.25
SMARCD3-207ENST00000472103 MYO5CQ9NQX4 1742 aa22.86■■□□□ 1.25
SMARCD3-207ENST00000472103 CDC42BPBQ9Y5S2 1711 aa22.85■■□□□ 1.25
SMARCD3-207ENST00000472103 PLCH2O75038 1416 aa22.84■■□□□ 1.25
SMARCD3-207ENST00000472103 GPATCH8Q9UKJ3 1502 aaKnown RBP22.84■■□□□ 1.25
SMARCD3-207ENST00000472103 PREX2Q70Z35 1606 aa22.83■■□□□ 1.25
SMARCD3-207ENST00000472103 CCNB3Q8WWL7 1395 aa22.82■■□□□ 1.24
SMARCD3-207ENST00000472103 PHLDB1Q86UU1 1377 aa22.8■■□□□ 1.24
SMARCD3-207ENST00000472103 ARHGAP5Q13017 1502 aa22.77■■□□□ 1.24
SMARCD3-207ENST00000472103 ARAP3Q8WWN8 1544 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms