RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 CHD1O14646 1710 aa30.65■■■□□ 2.5
SNX4-203ENST00000471751 KIAA0586Q9BVV6 1533 aa30.62■■■□□ 2.49
SNX4-203ENST00000471751 CTTNBP2Q8WZ74 1663 aa30.6■■■□□ 2.49
SNX4-203ENST00000471751 CEP170Q5SW79 1584 aa30.54■■■□□ 2.48
SNX4-203ENST00000471751 EHMT2Q96KQ7 1210 aa30.5■■■□□ 2.47
SNX4-203ENST00000471751 IQGAP2Q13576 1575 aa30.5■■■□□ 2.47
SNX4-203ENST00000471751 ARHGEF11O15085 1522 aa30.43■■■□□ 2.46
SNX4-203ENST00000471751 CYB5RLQ6IPT4 315 aa30.42■■■□□ 2.46
SNX4-203ENST00000471751 RIMBP3CA6NJZ7 1639 aa30.41■■■□□ 2.46
SNX4-203ENST00000471751 RIMBP3BA6NNM3 1639 aa30.41■■■□□ 2.46
SNX4-203ENST00000471751 RIMBP3Q9UFD9 1639 aa30.41■■■□□ 2.46
SNX4-203ENST00000471751 UGGT2Q9NYU1 1516 aa30.41■■■□□ 2.46
SNX4-203ENST00000471751 CLASP1Q7Z460 1538 aa30.4■■■□□ 2.46
SNX4-203ENST00000471751 CEP162Q5TB80 1403 aa30.39■■■□□ 2.46
SNX4-203ENST00000471751 JPH4Q96JJ6 628 aa30.39■■■□□ 2.46
SNX4-203ENST00000471751 EFCAB5A4FU69 1503 aa30.37■■■□□ 2.45
SNX4-203ENST00000471751 CLIP1P30622 1438 aa30.36■■■□□ 2.45
SNX4-203ENST00000471751 SHROOM2Q13796 1616 aa30.33■■■□□ 2.45
SNX4-203ENST00000471751 CARMIL2Q6F5E8 1435 aa30.28■■■□□ 2.44
SNX4-203ENST00000471751 SAMD9Q5K651 1589 aa30.28■■■□□ 2.44
SNX4-203ENST00000471751 ARHGAP35Q9NRY4 1499 aa30.24■■■□□ 2.43
SNX4-203ENST00000471751 DISP1Q96F81 1524 aa30.2■■■□□ 2.43
SNX4-203ENST00000471751 ARAP1Q96P48 1450 aa30.19■■■□□ 2.42
SNX4-203ENST00000471751 PRG4Q92954 1404 aaPredicted RBP30.19■■■□□ 2.42
SNX4-203ENST00000471751 KIAA0556O60303 1618 aa30.17■■■□□ 2.42
SNX4-203ENST00000471751 RANGAP1P46060 587 aaPredicted RBP30.14■■■□□ 2.42
SNX4-203ENST00000471751 FMN1Q68DA7 1419 aa30.11■■■□□ 2.41
SNX4-203ENST00000471751 VPS8Q8N3P4 1428 aa30.04■■■□□ 2.4
SNX4-203ENST00000471751 FHOD3Q2V2M9 1422 aa30.03■■■□□ 2.4
SNX4-203ENST00000471751 P3H3Q8IVL6 736 aa30.01■■■□□ 2.4
SNX4-203ENST00000471751 TRHP20396 242 aaPredicted RBP29.98■■■□□ 2.39
SNX4-203ENST00000471751 PTPRGP23470 1445 aa29.98■■■□□ 2.39
SNX4-203ENST00000471751 ERCC6L2Q5T890 1561 aa29.92■■■□□ 2.38
SNX4-203ENST00000471751 CASKIN1Q8WXD9 1431 aa29.91■■■□□ 2.38
SNX4-203ENST00000471751 FYCO1Q9BQS8 1478 aa29.88■■■□□ 2.37
SNX4-203ENST00000471751 ABCA8O94911 1581 aa29.82■■■□□ 2.36
SNX4-203ENST00000471751 UACAQ9BZF9 1416 aa29.82■■■□□ 2.36
SNX4-203ENST00000471751 RAPGEF6Q8TEU7 1601 aa29.8■■■□□ 2.36
SNX4-203ENST00000471751 MAP3K1Q13233 1512 aa29.8■■■□□ 2.36
SNX4-203ENST00000471751 UHRF1BP1LA0JNW5 1464 aa29.79■■■□□ 2.36
SNX4-203ENST00000471751 HECW1Q76N89 1606 aa29.78■■■□□ 2.36
SNX4-203ENST00000471751 PCF11O94913 1555 aaKnown RBP29.76■■■□□ 2.35
SNX4-203ENST00000471751 APLP2Q06481 763 aa29.75■■■□□ 2.35
SNX4-203ENST00000471751 PLB1Q6P1J6 1458 aa29.74■■■□□ 2.35
SNX4-203ENST00000471751 CCDC18Q5T9S5 1454 aa29.74■■■□□ 2.35
SNX4-203ENST00000471751 ABCC2Q92887 1545 aa29.72■■■□□ 2.35
SNX4-203ENST00000471751 NUP153P49790 1475 aaKnown RBP29.69■■■□□ 2.34
SNX4-203ENST00000471751 TTBK1Q5TCY1 1321 aaPredicted RBP29.68■■■□□ 2.34
SNX4-203ENST00000471751 EPRSP07814 1512 aaKnown RBP29.66■■■□□ 2.34
SNX4-203ENST00000471751 ATP1B4Q9UN42 357 aaPredicted RBP29.63■■■□□ 2.33
SNX4-203ENST00000471751 CDK11AQ9UQ88 783 aaPredicted RBP29.63■■■□□ 2.33
SNX4-203ENST00000471751 KDM5BQ9UGL1 1544 aa29.61■■■□□ 2.33
SNX4-203ENST00000471751 TIAM1Q13009 1591 aa29.59■■■□□ 2.33
SNX4-203ENST00000471751 ATP10BO94823 1461 aa29.58■■■□□ 2.33
SNX4-203ENST00000471751 CFAP43Q8NDM7 1665 aa29.57■■■□□ 2.32
SNX4-203ENST00000471751 ADCY10Q96PN6 1610 aa29.57■■■□□ 2.32
SNX4-203ENST00000471751 LRRIQ1Q96JM4 1722 aa29.55■■■□□ 2.32
SNX4-203ENST00000471751 NPM1P06748 294 aaKnown RBP eCLIP29.53■■■□□ 2.32
SNX4-203ENST00000471751 LRRC9Q6ZRR7 1453 aa29.49■■■□□ 2.31
SNX4-203ENST00000471751 PLEKHD1A6NEE1 506 aa29.48■■■□□ 2.31
SNX4-203ENST00000471751 CDK13Q14004 1512 aaKnown RBP29.47■■■□□ 2.31
SNX4-203ENST00000471751 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.46■■■□□ 2.31
SNX4-203ENST00000471751 HNRNPUL2Q1KMD3 747 aaKnown RBP29.46■■■□□ 2.31
SNX4-203ENST00000471751 MTUS2Q5JR59 1369 aa29.45■■■□□ 2.3
SNX4-203ENST00000471751 ZCCHC11Q5TAX3 1644 aaKnown RBP29.45■■■□□ 2.3
SNX4-203ENST00000471751 EHBP1L1Q8N3D4 1523 aa29.42■■■□□ 2.3
SNX4-203ENST00000471751 TROQ12816 1431 aaPredicted RBP29.41■■■□□ 2.3
SNX4-203ENST00000471751 KANK4Q5T7N3 995 aaPredicted RBP29.4■■■□□ 2.3
SNX4-203ENST00000471751 ARID3CA6NKF2 412 aa29.35■■■□□ 2.29
SNX4-203ENST00000471751 MAPKBP1O60336 1514 aa29.34■■■□□ 2.29
SNX4-203ENST00000471751 MAGI3Q5TCQ9 1506 aa29.32■■■□□ 2.28
SNX4-203ENST00000471751 SUPT6HQ7KZ85 1726 aaKnown RBP29.31■■■□□ 2.28
SNX4-203ENST00000471751 WDR7Q9Y4E6 1490 aa29.3■■■□□ 2.28
SNX4-203ENST00000471751 FAM69CQ0P6D2 419 aa29.28■■■□□ 2.28
SNX4-203ENST00000471751 ASXL2Q76L83 1435 aa29.28■■■□□ 2.28
SNX4-203ENST00000471751 KIF14Q15058 1648 aa29.23■■■□□ 2.27
SNX4-203ENST00000471751 NCOA2Q15596 1464 aa29.22■■■□□ 2.27
SNX4-203ENST00000471751 ABCC10Q5T3U5 1492 aa29.16■■■□□ 2.26
SNX4-203ENST00000471751 PPARGC1BQ86YN6 1023 aaKnown RBP29.16■■■□□ 2.26
SNX4-203ENST00000471751 CCNB3Q8WWL7 1395 aa29.12■■■□□ 2.25
SNX4-203ENST00000471751 KCNH8Q96L42 1107 aa29.12■■■□□ 2.25
SNX4-203ENST00000471751 MIA2Q96PC5 1412 aa29.12■■■□□ 2.25
SNX4-203ENST00000471751 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
SNX4-203ENST00000471751 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.11■■■□□ 2.25
SNX4-203ENST00000471751 GLI2P10070 1586 aa29.1■■■□□ 2.25
SNX4-203ENST00000471751 ABCA9Q8IUA7 1624 aa29.1■■■□□ 2.25
SNX4-203ENST00000471751 PHLDB1Q86UU1 1377 aa29.09■■■□□ 2.25
SNX4-203ENST00000471751 ITSN2Q9NZM3 1697 aa29.08■■■□□ 2.25
SNX4-203ENST00000471751 ARAP3Q8WWN8 1544 aa29.08■■■□□ 2.25
SNX4-203ENST00000471751 GPATCH8Q9UKJ3 1502 aaKnown RBP29.07■■■□□ 2.24
SNX4-203ENST00000471751 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.06■■■□□ 2.24
SNX4-203ENST00000471751 RRBP1Q9P2E9 1410 aaKnown RBP29.06■■■□□ 2.24
SNX4-203ENST00000471751 PLCH2O75038 1416 aa29.03■■■□□ 2.24
SNX4-203ENST00000471751 TRIM26Q12899 539 aaPredicted RBP29.02■■■□□ 2.24
SNX4-203ENST00000471751 FGD6Q6ZV73 1430 aa29.01■■■□□ 2.23
SNX4-203ENST00000471751 CDC42BPAQ5VT25 1732 aa29■■■□□ 2.23
SNX4-203ENST00000471751 MYO5CQ9NQX4 1742 aa29■■■□□ 2.23
SNX4-203ENST00000471751 TTC37Q6PGP7 1564 aa28.99■■■□□ 2.23
SNX4-203ENST00000471751 CFDP1Q9UEE9 299 aaPredicted RBP28.99■■■□□ 2.23
SNX4-203ENST00000471751 DIP2BQ9P265 1576 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms