RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 RIMBP3Q9UFD9 1639 aa25.18■■□□□ 1.62
SNX13-205ENST00000471744 PRXQ9BXM0 1461 aa25.17■■□□□ 1.62
SNX13-205ENST00000471744 KIAA0586Q9BVV6 1533 aa25.14■■□□□ 1.62
SNX13-205ENST00000471744 SHROOM2Q13796 1616 aa25.14■■□□□ 1.61
SNX13-205ENST00000471744 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
SNX13-205ENST00000471744 JPH4Q96JJ6 628 aa25.05■■□□□ 1.6
SNX13-205ENST00000471744 IQGAP2Q13576 1575 aa25.04■■□□□ 1.6
SNX13-205ENST00000471744 CTTNBP2Q8WZ74 1663 aa25.03■■□□□ 1.6
SNX13-205ENST00000471744 KIF21BO75037 1637 aa25.01■■□□□ 1.59
SNX13-205ENST00000471744 PRG4Q92954 1404 aaPredicted RBP24.99■■□□□ 1.59
SNX13-205ENST00000471744 ARAP1Q96P48 1450 aa24.99■■□□□ 1.59
SNX13-205ENST00000471744 ERCC6L2Q5T890 1561 aa24.94■■□□□ 1.58
SNX13-205ENST00000471744 CYB5RLQ6IPT4 315 aa24.91■■□□□ 1.58
SNX13-205ENST00000471744 UGGT2Q9NYU1 1516 aa24.9■■□□□ 1.58
SNX13-205ENST00000471744 CARMIL2Q6F5E8 1435 aa24.89■■□□□ 1.58
SNX13-205ENST00000471744 GOLGA3Q08378 1498 aa24.85■■□□□ 1.57
SNX13-205ENST00000471744 DISP1Q96F81 1524 aa24.8■■□□□ 1.56
SNX13-205ENST00000471744 KIAA0556O60303 1618 aa24.78■■□□□ 1.56
SNX13-205ENST00000471744 TNIKQ9UKE5 1360 aa24.78■■□□□ 1.56
SNX13-205ENST00000471744 UBTFP17480 764 aaKnown RBP24.74■■□□□ 1.55
SNX13-205ENST00000471744 PTPRGP23470 1445 aa24.73■■□□□ 1.55
SNX13-205ENST00000471744 SAMD9Q5K651 1589 aa24.67■■□□□ 1.54
SNX13-205ENST00000471744 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
SNX13-205ENST00000471744 EHMT2Q96KQ7 1210 aa24.66■■□□□ 1.54
SNX13-205ENST00000471744 EFCAB5A4FU69 1503 aa24.64■■□□□ 1.53
SNX13-205ENST00000471744 ADCY10Q96PN6 1610 aa24.6■■□□□ 1.53
SNX13-205ENST00000471744 TTBK1Q5TCY1 1321 aaPredicted RBP24.6■■□□□ 1.53
SNX13-205ENST00000471744 UACAQ9BZF9 1416 aa24.58■■□□□ 1.53
SNX13-205ENST00000471744 UHRF1BP1LA0JNW5 1464 aa24.57■■□□□ 1.52
SNX13-205ENST00000471744 RANGAP1P46060 587 aaPredicted RBP24.55■■□□□ 1.52
SNX13-205ENST00000471744 ABCC2Q92887 1545 aa24.55■■□□□ 1.52
SNX13-205ENST00000471744 NPM1P06748 294 aaKnown RBP eCLIP24.54■■□□□ 1.52
SNX13-205ENST00000471744 P3H3Q8IVL6 736 aa24.53■■□□□ 1.52
SNX13-205ENST00000471744 ABCA8O94911 1581 aa24.5■■□□□ 1.51
SNX13-205ENST00000471744 FHOD3Q2V2M9 1422 aa24.48■■□□□ 1.51
SNX13-205ENST00000471744 PLB1Q6P1J6 1458 aa24.47■■□□□ 1.51
SNX13-205ENST00000471744 ARHGAP35Q9NRY4 1499 aa24.46■■□□□ 1.51
SNX13-205ENST00000471744 MAPKBP1O60336 1514 aa24.45■■□□□ 1.51
SNX13-205ENST00000471744 KDM5BQ9UGL1 1544 aa24.43■■□□□ 1.5
SNX13-205ENST00000471744 RAPGEF6Q8TEU7 1601 aa24.42■■□□□ 1.5
SNX13-205ENST00000471744 FMN1Q68DA7 1419 aa24.4■■□□□ 1.5
SNX13-205ENST00000471744 CLIP1P30622 1438 aa24.39■■□□□ 1.5
SNX13-205ENST00000471744 ZCCHC11Q5TAX3 1644 aaKnown RBP24.39■■□□□ 1.49
SNX13-205ENST00000471744 TRHP20396 242 aaPredicted RBP24.36■■□□□ 1.49
SNX13-205ENST00000471744 LOC105371045A0A1W2PR82 267 aa24.34■■□□□ 1.49
SNX13-205ENST00000471744 CEP162Q5TB80 1403 aa24.32■■□□□ 1.48
SNX13-205ENST00000471744 ASXL2Q76L83 1435 aa24.3■■□□□ 1.48
SNX13-205ENST00000471744 ABCC10Q5T3U5 1492 aa24.29■■□□□ 1.48
SNX13-205ENST00000471744 NUP153P49790 1475 aaKnown RBP24.28■■□□□ 1.48
SNX13-205ENST00000471744 KIF13AQ9H1H9 1805 aa24.28■■□□□ 1.48
SNX13-205ENST00000471744 ATP10BO94823 1461 aa24.27■■□□□ 1.48
SNX13-205ENST00000471744 HECW1Q76N89 1606 aa24.27■■□□□ 1.48
SNX13-205ENST00000471744 DIP2BQ9P265 1576 aa24.25■■□□□ 1.47
SNX13-205ENST00000471744 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
SNX13-205ENST00000471744 WDR7Q9Y4E6 1490 aa24.23■■□□□ 1.47
SNX13-205ENST00000471744 FAM69CQ0P6D2 419 aa24.2■■□□□ 1.46
SNX13-205ENST00000471744 CASKIN1Q8WXD9 1431 aa24.19■■□□□ 1.46
SNX13-205ENST00000471744 GLI2P10070 1586 aa24.19■■□□□ 1.46
SNX13-205ENST00000471744 ARID3CA6NKF2 412 aa24.18■■□□□ 1.46
SNX13-205ENST00000471744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.18■■□□□ 1.46
SNX13-205ENST00000471744 HNRNPUL2Q1KMD3 747 aaKnown RBP24.18■■□□□ 1.46
SNX13-205ENST00000471744 PCF11O94913 1555 aaKnown RBP24.17■■□□□ 1.46
SNX13-205ENST00000471744 EPRSP07814 1512 aaKnown RBP24.17■■□□□ 1.46
SNX13-205ENST00000471744 FYCO1Q9BQS8 1478 aa24.17■■□□□ 1.46
SNX13-205ENST00000471744 ATP1B4Q9UN42 357 aaPredicted RBP24.15■■□□□ 1.46
SNX13-205ENST00000471744 CCDC18Q5T9S5 1454 aa24.12■■□□□ 1.45
SNX13-205ENST00000471744 CDK13Q14004 1512 aaKnown RBP24.11■■□□□ 1.45
SNX13-205ENST00000471744 PLEKHD1A6NEE1 506 aa24.11■■□□□ 1.45
SNX13-205ENST00000471744 CDK11AQ9UQ88 783 aaPredicted RBP24.09■■□□□ 1.45
SNX13-205ENST00000471744 LRRIQ1Q96JM4 1722 aa24.09■■□□□ 1.45
SNX13-205ENST00000471744 MAP3K4Q9Y6R4 1608 aa24.07■■□□□ 1.44
SNX13-205ENST00000471744 KCNH8Q96L42 1107 aa24.07■■□□□ 1.44
SNX13-205ENST00000471744 CFAP43Q8NDM7 1665 aa24.07■■□□□ 1.44
SNX13-205ENST00000471744 TSPOAP1O95153 1857 aa24.07■■□□□ 1.44
SNX13-205ENST00000471744 VPS8Q8N3P4 1428 aa24.03■■□□□ 1.44
SNX13-205ENST00000471744 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.44
SNX13-205ENST00000471744 TROQ12816 1431 aaPredicted RBP23.98■■□□□ 1.43
SNX13-205ENST00000471744 CD109Q6YHK3 1445 aa23.98■■□□□ 1.43
SNX13-205ENST00000471744 TEX14Q8IWB6 1497 aa23.98■■□□□ 1.43
SNX13-205ENST00000471744 PPRC1Q5VV67 1664 aaKnown RBP23.98■■□□□ 1.43
SNX13-205ENST00000471744 MAGI3Q5TCQ9 1506 aa23.95■■□□□ 1.43
SNX13-205ENST00000471744 KIF14Q15058 1648 aa23.94■■□□□ 1.42
SNX13-205ENST00000471744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.91■■□□□ 1.42
SNX13-205ENST00000471744 TTC37Q6PGP7 1564 aa23.87■■□□□ 1.41
SNX13-205ENST00000471744 MTUS2Q5JR59 1369 aa23.86■■□□□ 1.41
SNX13-205ENST00000471744 MAP3K1Q13233 1512 aa23.85■■□□□ 1.41
SNX13-205ENST00000471744 TIAM1Q13009 1591 aa23.85■■□□□ 1.41
SNX13-205ENST00000471744 KDM6BO15054 1643 aa23.84■■□□□ 1.41
SNX13-205ENST00000471744 MYO5CQ9NQX4 1742 aa23.84■■□□□ 1.41
SNX13-205ENST00000471744 PHLDB1Q86UU1 1377 aa23.84■■□□□ 1.41
SNX13-205ENST00000471744 EHBP1L1Q8N3D4 1523 aa23.84■■□□□ 1.41
SNX13-205ENST00000471744 CFAP74Q9C0B2 1584 aa23.82■■□□□ 1.4
SNX13-205ENST00000471744 NEO1Q92859 1461 aa23.81■■□□□ 1.4
SNX13-205ENST00000471744 ARAP3Q8WWN8 1544 aa23.81■■□□□ 1.4
SNX13-205ENST00000471744 PLCH2O75038 1416 aa23.79■■□□□ 1.4
SNX13-205ENST00000471744 APLP2Q06481 763 aa23.79■■□□□ 1.4
SNX13-205ENST00000471744 FANCAO15360 1455 aa23.75■■□□□ 1.39
SNX13-205ENST00000471744 SUPT6HQ7KZ85 1726 aaKnown RBP23.74■■□□□ 1.39
SNX13-205ENST00000471744 PREX2Q70Z35 1606 aa23.73■■□□□ 1.39
SNX13-205ENST00000471744 LRRC9Q6ZRR7 1453 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms