RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.12
APLF-204ENST00000471727 ZNF316A6NFI3 1004 aaPredicted RBP15.76■□□□□ 0.11
APLF-204ENST00000471727 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
APLF-204ENST00000471727 GAPVD1Q14C86 1478 aa15.76■□□□□ 0.11
APLF-204ENST00000471727 LRRC9Q6ZRR7 1453 aa15.75■□□□□ 0.11
APLF-204ENST00000471727 DIEXFQ68CQ4 756 aaKnown RBP15.74■□□□□ 0.11
APLF-204ENST00000471727 FYCO1Q9BQS8 1478 aa15.73■□□□□ 0.11
APLF-204ENST00000471727 FMN1Q68DA7 1419 aa15.73■□□□□ 0.11
APLF-204ENST00000471727 CASKIN1Q8WXD9 1431 aa15.73■□□□□ 0.11
APLF-204ENST00000471727 CTTNBP2Q8WZ74 1663 aa15.72■□□□□ 0.11
APLF-204ENST00000471727 TDRD9Q8NDG6 1382 aaKnown RBP15.7■□□□□ 0.1
APLF-204ENST00000471727 CFAP43Q8NDM7 1665 aa15.7■□□□□ 0.1
APLF-204ENST00000471727 DHX57Q6P158 1386 aaKnown RBP15.69■□□□□ 0.1
APLF-204ENST00000471727 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
APLF-204ENST00000471727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.67■□□□□ 0.1
APLF-204ENST00000471727 PCF11O94913 1555 aaKnown RBP15.67■□□□□ 0.1
APLF-204ENST00000471727 FHOD3Q2V2M9 1422 aa15.67■□□□□ 0.1
APLF-204ENST00000471727 PHF23Q9BUL5 403 aaPredicted RBP15.67■□□□□ 0.1
APLF-204ENST00000471727 TARBP1Q13395 1621 aaKnown RBP15.66■□□□□ 0.1
APLF-204ENST00000471727 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
APLF-204ENST00000471727 P3H3Q8IVL6 736 aa15.64■□□□□ 0.09
APLF-204ENST00000471727 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
APLF-204ENST00000471727 SAMD9Q5K651 1589 aa15.63■□□□□ 0.09
APLF-204ENST00000471727 PHLDB1Q86UU1 1377 aa15.61■□□□□ 0.09
APLF-204ENST00000471727 THOC2Q8NI27 1593 aaKnown RBP15.61■□□□□ 0.09
APLF-204ENST00000471727 SETD5Q9C0A6 1442 aa15.59■□□□□ 0.09
APLF-204ENST00000471727 ATP1B4Q9UN42 357 aaPredicted RBP15.59■□□□□ 0.09
APLF-204ENST00000471727 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
APLF-204ENST00000471727 IFT140Q96RY7 1462 aa15.58■□□□□ 0.08
APLF-204ENST00000471727 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
APLF-204ENST00000471727 RAB3GAP2Q9H2M9 1393 aa15.56■□□□□ 0.08
APLF-204ENST00000471727 WDR62O43379 1518 aa15.53■□□□□ 0.08
APLF-204ENST00000471727 MTUS2Q5JR59 1369 aa15.53■□□□□ 0.08
APLF-204ENST00000471727 PBRM1Q86U86 1689 aa15.53■□□□□ 0.08
APLF-204ENST00000471727 CENPBP07199 599 aaPredicted RBP15.53■□□□□ 0.08
APLF-204ENST00000471727 ITGAEP38570 1179 aa15.53■□□□□ 0.08
APLF-204ENST00000471727 FAM50AQ14320 339 aaKnown RBP15.53■□□□□ 0.08
APLF-204ENST00000471727 ADAMTS12P58397 1594 aa15.52■□□□□ 0.08
APLF-204ENST00000471727 CCDC18Q5T9S5 1454 aa15.52■□□□□ 0.07
APLF-204ENST00000471727 TIMELESSQ9UNS1 1208 aa15.5■□□□□ 0.07
APLF-204ENST00000471727 FGD6Q6ZV73 1430 aa15.5■□□□□ 0.07
APLF-204ENST00000471727 IQGAP2Q13576 1575 aa15.49■□□□□ 0.07
APLF-204ENST00000471727 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
APLF-204ENST00000471727 UGGT2Q9NYU1 1516 aa15.46■□□□□ 0.07
APLF-204ENST00000471727 ACIN1Q9UKV3 1341 aaKnown RBP15.46■□□□□ 0.06
APLF-204ENST00000471727 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
APLF-204ENST00000471727 HECW1Q76N89 1606 aa15.44■□□□□ 0.06
APLF-204ENST00000471727 NCOA2Q15596 1464 aa15.44■□□□□ 0.06
APLF-204ENST00000471727 KIAA0586Q9BVV6 1533 aa15.44■□□□□ 0.06
APLF-204ENST00000471727 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
APLF-204ENST00000471727 MAPKBP1O60336 1514 aa15.42■□□□□ 0.06
APLF-204ENST00000471727 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
APLF-204ENST00000471727 ZNF608Q9ULD9 1512 aaPredicted RBP15.39■□□□□ 0.05
APLF-204ENST00000471727 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
APLF-204ENST00000471727 HFM1A2PYH4 1435 aa15.39■□□□□ 0.05
APLF-204ENST00000471727 MAGI1Q96QZ7 1491 aaPredicted RBP15.38■□□□□ 0.05
APLF-204ENST00000471727 EPRSP07814 1512 aaKnown RBP15.38■□□□□ 0.05
APLF-204ENST00000471727 MIA2Q96PC5 1412 aa15.37■□□□□ 0.05
APLF-204ENST00000471727 LRRIQ1Q96JM4 1722 aa15.36■□□□□ 0.05
APLF-204ENST00000471727 GRIN2AQ12879 1464 aa15.36■□□□□ 0.05
APLF-204ENST00000471727 TCOF1Q13428 1488 aaKnown RBP15.36■□□□□ 0.05
APLF-204ENST00000471727 SCAF1Q9H7N4 1312 aaKnown RBP15.36■□□□□ 0.05
APLF-204ENST00000471727 MIER1Q8N108 512 aa15.35■□□□□ 0.05
APLF-204ENST00000471727 EIF4G3O43432 1585 aaKnown RBP15.33■□□□□ 0.05
APLF-204ENST00000471727 UACAQ9BZF9 1416 aa15.33■□□□□ 0.04
APLF-204ENST00000471727 NEUROD1Q13562 356 aa15.33■□□□□ 0.04
APLF-204ENST00000471727 AKNAQ7Z591 1439 aa15.33■□□□□ 0.04
APLF-204ENST00000471727 CDK11AQ9UQ88 783 aaPredicted RBP15.32■□□□□ 0.04
APLF-204ENST00000471727 PTPN23Q9H3S7 1636 aa15.32■□□□□ 0.04
APLF-204ENST00000471727 SYNJ2O15056 1496 aa15.31■□□□□ 0.04
APLF-204ENST00000471727 KIAA0556O60303 1618 aa15.31■□□□□ 0.04
APLF-204ENST00000471727 DISP1Q96F81 1524 aa15.3■□□□□ 0.04
APLF-204ENST00000471727 MAGI3Q5TCQ9 1506 aa15.3■□□□□ 0.04
APLF-204ENST00000471727 NAIPQ13075 1403 aa15.3■□□□□ 0.04
APLF-204ENST00000471727 PTPRKQ15262 1439 aa15.29■□□□□ 0.04
APLF-204ENST00000471727 CHMP7Q8WUX9 453 aaPredicted RBP15.28■□□□□ 0.04
APLF-204ENST00000471727 CARMIL2Q6F5E8 1435 aa15.26■□□□□ 0.03
APLF-204ENST00000471727 PPP1R15AO75807 674 aaPredicted RBP15.25■□□□□ 0.03
APLF-204ENST00000471727 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
APLF-204ENST00000471727 CDK13Q14004 1512 aaKnown RBP15.24■□□□□ 0.03
APLF-204ENST00000471727 RAPGEF6Q8TEU7 1601 aa15.24■□□□□ 0.03
APLF-204ENST00000471727 NUP160Q12769 1436 aa15.23■□□□□ 0.03
APLF-204ENST00000471727 NUP153P49790 1475 aaKnown RBP15.22■□□□□ 0.03
APLF-204ENST00000471727 ROCK1Q13464 1354 aa15.21■□□□□ 0.03
APLF-204ENST00000471727 TONSLQ96HA7 1378 aa15.21■□□□□ 0.02
APLF-204ENST00000471727 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
APLF-204ENST00000471727 JPH4Q96JJ6 628 aa15.19■□□□□ 0.02
APLF-204ENST00000471727 GCC2Q8IWJ2 1684 aa15.19■□□□□ 0.02
APLF-204ENST00000471727 TROQ12816 1431 aaPredicted RBP15.18■□□□□ 0.02
APLF-204ENST00000471727 GTF3C3Q9Y5Q9 886 aa15.17■□□□□ 0.02
APLF-204ENST00000471727 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
APLF-204ENST00000471727 RRP7BPQ9NSQ0 103 aa15.14■□□□□ 0.01
APLF-204ENST00000471727 DAPK1P53355 1430 aa15.14■□□□□ 0.01
APLF-204ENST00000471727 FBLN2P98095 1184 aa15.14■□□□□ 0.01
APLF-204ENST00000471727 CHIC2Q9UKJ5 165 aa15.13■□□□□ 0.01
APLF-204ENST00000471727 DNMT1P26358 1616 aaKnown RBP15.12■□□□□ 0.01
APLF-204ENST00000471727 ABCC5O15440 1437 aa15.11■□□□□ 0.01
APLF-204ENST00000471727 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
APLF-204ENST00000471727 TRIM52Q96A61 297 aa15.1■□□□□ 0.01
APLF-204ENST00000471727 ADCY10Q96PN6 1610 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms