RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 SYNJ2O15056 1496 aa21.3■■□□□ 1
LINC00888-202ENST00000471496 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
LINC00888-202ENST00000471496 ADAMTS12P58397 1594 aa21.28■■□□□ 1
LINC00888-202ENST00000471496 FBLN2P98095 1184 aa21.27■■□□□ 1
LINC00888-202ENST00000471496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.26■□□□□ 0.99
LINC00888-202ENST00000471496 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
LINC00888-202ENST00000471496 C1QBPQ07021 282 aaKnown RBP21.22■□□□□ 0.99
LINC00888-202ENST00000471496 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
LINC00888-202ENST00000471496 FHAD1B1AJZ9 1412 aa21.2■□□□□ 0.98
LINC00888-202ENST00000471496 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
LINC00888-202ENST00000471496 GRIN2AQ12879 1464 aa21.18■□□□□ 0.98
LINC00888-202ENST00000471496 IGF1RP08069 1367 aa21.16■□□□□ 0.98
LINC00888-202ENST00000471496 RIMBP3CA6NJZ7 1639 aa21.13■□□□□ 0.97
LINC00888-202ENST00000471496 RIMBP3BA6NNM3 1639 aa21.13■□□□□ 0.97
LINC00888-202ENST00000471496 RIMBP3Q9UFD9 1639 aa21.13■□□□□ 0.97
LINC00888-202ENST00000471496 TRIM41Q8WV44 630 aa21.13■□□□□ 0.97
LINC00888-202ENST00000471496 CEP170Q5SW79 1584 aa21.11■□□□□ 0.97
LINC00888-202ENST00000471496 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
LINC00888-202ENST00000471496 CUL7Q14999 1698 aa21.11■□□□□ 0.97
LINC00888-202ENST00000471496 NUP160Q12769 1436 aa21.11■□□□□ 0.97
LINC00888-202ENST00000471496 ARHGEF11O15085 1522 aa21.1■□□□□ 0.97
LINC00888-202ENST00000471496 CARMIL1Q5VZK9 1371 aa21■□□□□ 0.95
LINC00888-202ENST00000471496 SHROOM2Q13796 1616 aa20.98■□□□□ 0.95
LINC00888-202ENST00000471496 ARAP1Q96P48 1450 aa20.95■□□□□ 0.94
LINC00888-202ENST00000471496 ERCC6L2Q5T890 1561 aa20.92■□□□□ 0.94
LINC00888-202ENST00000471496 RAPGEF2Q9Y4G8 1499 aa20.89■□□□□ 0.93
LINC00888-202ENST00000471496 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
LINC00888-202ENST00000471496 PRXQ9BXM0 1461 aa20.86■□□□□ 0.93
LINC00888-202ENST00000471496 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
LINC00888-202ENST00000471496 JPH4Q96JJ6 628 aa20.84■□□□□ 0.93
LINC00888-202ENST00000471496 EEA1Q15075 1411 aa20.81■□□□□ 0.92
LINC00888-202ENST00000471496 PRG4Q92954 1404 aaPredicted RBP20.8■□□□□ 0.92
LINC00888-202ENST00000471496 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
LINC00888-202ENST00000471496 U3KPZ7 1027 aaPredicted RBP20.79■□□□□ 0.92
LINC00888-202ENST00000471496 IQGAP2Q13576 1575 aa20.78■□□□□ 0.92
LINC00888-202ENST00000471496 SLC4A2P04920 1241 aa20.77■□□□□ 0.92
LINC00888-202ENST00000471496 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
LINC00888-202ENST00000471496 FAM9AQ8IZU1 332 aaPredicted RBP20.7■□□□□ 0.9
LINC00888-202ENST00000471496 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
LINC00888-202ENST00000471496 DISP1Q96F81 1524 aa20.66■□□□□ 0.9
LINC00888-202ENST00000471496 KIF21BO75037 1637 aa20.66■□□□□ 0.9
LINC00888-202ENST00000471496 SLC4A1APQ9BWU0 796 aaKnown RBP20.65■□□□□ 0.9
LINC00888-202ENST00000471496 CARMIL2Q6F5E8 1435 aa20.6■□□□□ 0.89
LINC00888-202ENST00000471496 KIAA0556O60303 1618 aa20.6■□□□□ 0.89
LINC00888-202ENST00000471496 TNIKQ9UKE5 1360 aa20.56■□□□□ 0.88
LINC00888-202ENST00000471496 ADCY10Q96PN6 1610 aa20.56■□□□□ 0.88
LINC00888-202ENST00000471496 PTPRGP23470 1445 aa20.54■□□□□ 0.88
LINC00888-202ENST00000471496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.53■□□□□ 0.88
LINC00888-202ENST00000471496 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
LINC00888-202ENST00000471496 GOLGA3Q08378 1498 aa20.5■□□□□ 0.87
LINC00888-202ENST00000471496 APLP2Q06481 763 aa20.5■□□□□ 0.87
LINC00888-202ENST00000471496 SAMD9Q5K651 1589 aa20.49■□□□□ 0.87
LINC00888-202ENST00000471496 TTBK1Q5TCY1 1321 aaPredicted RBP20.45■□□□□ 0.86
LINC00888-202ENST00000471496 UHRF1BP1LA0JNW5 1464 aa20.44■□□□□ 0.86
LINC00888-202ENST00000471496 UACAQ9BZF9 1416 aa20.43■□□□□ 0.86
LINC00888-202ENST00000471496 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
LINC00888-202ENST00000471496 ABCC2Q92887 1545 aa20.41■□□□□ 0.86
LINC00888-202ENST00000471496 MAPKBP1O60336 1514 aa20.39■□□□□ 0.86
LINC00888-202ENST00000471496 ABCA8O94911 1581 aa20.38■□□□□ 0.85
LINC00888-202ENST00000471496 PLB1Q6P1J6 1458 aa20.38■□□□□ 0.85
LINC00888-202ENST00000471496 CAPN15O75808 1086 aa20.37■□□□□ 0.85
LINC00888-202ENST00000471496 UBTFP17480 764 aaKnown RBP20.37■□□□□ 0.85
LINC00888-202ENST00000471496 SAMD1Q6SPF0 538 aaPredicted RBP20.37■□□□□ 0.85
LINC00888-202ENST00000471496 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
LINC00888-202ENST00000471496 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
LINC00888-202ENST00000471496 KIF13AQ9H1H9 1805 aa20.36■□□□□ 0.85
LINC00888-202ENST00000471496 EFCAB5A4FU69 1503 aa20.35■□□□□ 0.85
LINC00888-202ENST00000471496 KDM5BQ9UGL1 1544 aa20.34■□□□□ 0.85
LINC00888-202ENST00000471496 SPINK5Q9NQ38 1064 aaPredicted RBP20.34■□□□□ 0.85
LINC00888-202ENST00000471496 NPM1P06748 294 aaKnown RBP eCLIP20.33■□□□□ 0.85
LINC00888-202ENST00000471496 RANGAP1P46060 587 aaPredicted RBP20.33■□□□□ 0.85
LINC00888-202ENST00000471496 MYCNP04198 464 aaPredicted RBP20.32■□□□□ 0.84
LINC00888-202ENST00000471496 ZCCHC11Q5TAX3 1644 aaKnown RBP20.32■□□□□ 0.84
LINC00888-202ENST00000471496 FHOD3Q2V2M9 1422 aa20.32■□□□□ 0.84
LINC00888-202ENST00000471496 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
LINC00888-202ENST00000471496 ABCC10Q5T3U5 1492 aa20.28■□□□□ 0.84
LINC00888-202ENST00000471496 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
LINC00888-202ENST00000471496 FOXD4L1Q9NU39 408 aa20.27■□□□□ 0.84
LINC00888-202ENST00000471496 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.83
LINC00888-202ENST00000471496 ASXL2Q76L83 1435 aa20.26■□□□□ 0.83
LINC00888-202ENST00000471496 ZNF219Q9P2Y4 722 aaPredicted RBP20.21■□□□□ 0.83
LINC00888-202ENST00000471496 ATP10BO94823 1461 aa20.2■□□□□ 0.82
LINC00888-202ENST00000471496 NUP153P49790 1475 aaKnown RBP20.19■□□□□ 0.82
LINC00888-202ENST00000471496 FAM69CQ0P6D2 419 aa20.18■□□□□ 0.82
LINC00888-202ENST00000471496 DSG3P32926 999 aa20.17■□□□□ 0.82
LINC00888-202ENST00000471496 GLI2P10070 1586 aa20.16■□□□□ 0.82
LINC00888-202ENST00000471496 WDR7Q9Y4E6 1490 aa20.15■□□□□ 0.82
LINC00888-202ENST00000471496 EPRSP07814 1512 aaKnown RBP20.15■□□□□ 0.82
LINC00888-202ENST00000471496 FMN1Q68DA7 1419 aa20.12■□□□□ 0.81
LINC00888-202ENST00000471496 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
LINC00888-202ENST00000471496 CLIP1P30622 1438 aa20.12■□□□□ 0.81
LINC00888-202ENST00000471496 TSPOAP1O95153 1857 aa20.11■□□□□ 0.81
LINC00888-202ENST00000471496 MAP3K4Q9Y6R4 1608 aa20.1■□□□□ 0.81
LINC00888-202ENST00000471496 PPRC1Q5VV67 1664 aaKnown RBP20.1■□□□□ 0.81
LINC00888-202ENST00000471496 LOC105371045A0A1W2PR82 267 aa20.1■□□□□ 0.81
LINC00888-202ENST00000471496 LRRIQ1Q96JM4 1722 aa20.08■□□□□ 0.81
LINC00888-202ENST00000471496 HECW1Q76N89 1606 aa20.06■□□□□ 0.8
LINC00888-202ENST00000471496 CDK13Q14004 1512 aaKnown RBP20.05■□□□□ 0.8
LINC00888-202ENST00000471496 CEP162Q5TB80 1403 aa20.05■□□□□ 0.8
LINC00888-202ENST00000471496 PCF11O94913 1555 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms