RNA–Protein interactions for RNA: ENST00000471471.1

GTF2B-205, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-205ENST00000471471 SYNJ2O15056 1496 aa12.56□□□□□ -0.4
GTF2B-205ENST00000471471 ERCC6L2Q5T890 1561 aa12.55□□□□□ -0.4
GTF2B-205ENST00000471471 WDR97A6NE52 1622 aa12.54□□□□□ -0.4
GTF2B-205ENST00000471471 KIF13AQ9H1H9 1805 aa12.53□□□□□ -0.4
GTF2B-205ENST00000471471 GRIN2BQ13224 1484 aa12.52□□□□□ -0.41
GTF2B-205ENST00000471471 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
GTF2B-205ENST00000471471 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
GTF2B-205ENST00000471471 CEP170Q5SW79 1584 aa12.43□□□□□ -0.42
GTF2B-205ENST00000471471 PBRM1Q86U86 1689 aa12.41□□□□□ -0.42
GTF2B-205ENST00000471471 ABCC10Q5T3U5 1492 aa12.4□□□□□ -0.43
GTF2B-205ENST00000471471 CUX1P39880 1505 aa12.39□□□□□ -0.43
GTF2B-205ENST00000471471 FAM69CQ0P6D2 419 aa12.39□□□□□ -0.43
GTF2B-205ENST00000471471 SHROOM2Q13796 1616 aa12.38□□□□□ -0.43
GTF2B-205ENST00000471471 NUP160Q12769 1436 aa12.37□□□□□ -0.43
GTF2B-205ENST00000471471 GRIN2AQ12879 1464 aa12.37□□□□□ -0.43
GTF2B-205ENST00000471471 KDM6BO15054 1643 aa12.37□□□□□ -0.43
GTF2B-205ENST00000471471 DIP2BQ9P265 1576 aa12.35□□□□□ -0.43
GTF2B-205ENST00000471471 ABCA5Q8WWZ7 1642 aa12.33□□□□□ -0.43
GTF2B-205ENST00000471471 MAPKBP1O60336 1514 aa12.32□□□□□ -0.44
GTF2B-205ENST00000471471 HECW2Q9P2P5 1572 aa12.32□□□□□ -0.44
GTF2B-205ENST00000471471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.31□□□□□ -0.44
GTF2B-205ENST00000471471 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
GTF2B-205ENST00000471471 ADGRL1O94910 1474 aa12.3□□□□□ -0.44
GTF2B-205ENST00000471471 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
GTF2B-205ENST00000471471 ADAMTS12P58397 1594 aa12.29□□□□□ -0.44
GTF2B-205ENST00000471471 PRG4Q92954 1404 aaPredicted RBP12.28□□□□□ -0.44
GTF2B-205ENST00000471471 FBXO41Q8TF61 875 aa12.26□□□□□ -0.45
GTF2B-205ENST00000471471 TSPOAP1O95153 1857 aa12.24□□□□□ -0.45
GTF2B-205ENST00000471471 ADCY10Q96PN6 1610 aa12.24□□□□□ -0.45
GTF2B-205ENST00000471471 NPM1P06748 294 aaKnown RBP eCLIP12.23□□□□□ -0.45
GTF2B-205ENST00000471471 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
GTF2B-205ENST00000471471 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.45
GTF2B-205ENST00000471471 COL17A1Q9UMD9 1497 aaPredicted RBP12.16□□□□□ -0.46
GTF2B-205ENST00000471471 PPRC1Q5VV67 1664 aaKnown RBP12.16□□□□□ -0.46
GTF2B-205ENST00000471471 RUSC2Q8N2Y8 1516 aa12.13□□□□□ -0.47
GTF2B-205ENST00000471471 ERICH3Q5RHP9 1530 aa12.12□□□□□ -0.47
GTF2B-205ENST00000471471 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
GTF2B-205ENST00000471471 LMTK3Q96Q04 1460 aa12.11□□□□□ -0.47
GTF2B-205ENST00000471471 GLI2P10070 1586 aa12.09□□□□□ -0.47
GTF2B-205ENST00000471471 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
GTF2B-205ENST00000471471 ASXL2Q76L83 1435 aa12.05□□□□□ -0.48
GTF2B-205ENST00000471471 SOCS7O14512 581 aa12.03□□□□□ -0.48
GTF2B-205ENST00000471471 ILDR2Q71H61 639 aa12.03□□□□□ -0.48
GTF2B-205ENST00000471471 PLB1Q6P1J6 1458 aa12.02□□□□□ -0.48
GTF2B-205ENST00000471471 ABCC2Q92887 1545 aa12.02□□□□□ -0.48
GTF2B-205ENST00000471471 TOP2BQ02880 1626 aa12.02□□□□□ -0.49
GTF2B-205ENST00000471471 PTPRGP23470 1445 aa12□□□□□ -0.49
GTF2B-205ENST00000471471 KIAA0586Q9BVV6 1533 aa12□□□□□ -0.49
GTF2B-205ENST00000471471 MAP3K4Q9Y6R4 1608 aa12□□□□□ -0.49
GTF2B-205ENST00000471471 BIVM-ERCC5R4GMW8 1640 aa12□□□□□ -0.49
GTF2B-205ENST00000471471 EPRSP07814 1512 aaKnown RBP11.98□□□□□ -0.49
GTF2B-205ENST00000471471 TEX14Q8IWB6 1497 aa11.96□□□□□ -0.49
GTF2B-205ENST00000471471 DSG3P32926 999 aa11.96□□□□□ -0.49
GTF2B-205ENST00000471471 CUL7Q14999 1698 aa11.94□□□□□ -0.5
GTF2B-205ENST00000471471 UHRF1BP1LA0JNW5 1464 aa11.94□□□□□ -0.5
GTF2B-205ENST00000471471 TTBK1Q5TCY1 1321 aaPredicted RBP11.92□□□□□ -0.5
GTF2B-205ENST00000471471 SPINK5Q9NQ38 1064 aaPredicted RBP11.92□□□□□ -0.5
GTF2B-205ENST00000471471 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
GTF2B-205ENST00000471471 TNIKQ9UKE5 1360 aa11.92□□□□□ -0.5
GTF2B-205ENST00000471471 PTPRMP28827 1452 aa11.9□□□□□ -0.5
GTF2B-205ENST00000471471 CAPN15O75808 1086 aa11.9□□□□□ -0.5
GTF2B-205ENST00000471471 KDM5BQ9UGL1 1544 aa11.9□□□□□ -0.5
GTF2B-205ENST00000471471 KIF21BO75037 1637 aa11.89□□□□□ -0.51
GTF2B-205ENST00000471471 UACAQ9BZF9 1416 aa11.89□□□□□ -0.51
GTF2B-205ENST00000471471 PCF11O94913 1555 aaKnown RBP11.88□□□□□ -0.51
GTF2B-205ENST00000471471 IGF1RP08069 1367 aa11.86□□□□□ -0.51
GTF2B-205ENST00000471471 ADAMTSL3P82987 1691 aa11.86□□□□□ -0.51
GTF2B-205ENST00000471471 CARMIL2Q6F5E8 1435 aa11.86□□□□□ -0.51
GTF2B-205ENST00000471471 ZCCHC11Q5TAX3 1644 aaKnown RBP11.85□□□□□ -0.51
GTF2B-205ENST00000471471 MAGI3Q5TCQ9 1506 aa11.85□□□□□ -0.51
GTF2B-205ENST00000471471 CERKQ8TCT0 537 aa11.84□□□□□ -0.51
GTF2B-205ENST00000471471 WDR7Q9Y4E6 1490 aa11.83□□□□□ -0.52
GTF2B-205ENST00000471471 POTEHQ6S545 545 aa11.82□□□□□ -0.52
GTF2B-205ENST00000471471 DISP1Q96F81 1524 aa11.81□□□□□ -0.52
GTF2B-205ENST00000471471 CD109Q6YHK3 1445 aa11.81□□□□□ -0.52
GTF2B-205ENST00000471471 SLC4A2P04920 1241 aa11.8□□□□□ -0.52
GTF2B-205ENST00000471471 KCNA4P22459 653 aa11.79□□□□□ -0.52
GTF2B-205ENST00000471471 HSPA2P54652 639 aa11.78□□□□□ -0.52
GTF2B-205ENST00000471471 CFAP43Q8NDM7 1665 aa11.78□□□□□ -0.52
GTF2B-205ENST00000471471 ARAP3Q8WWN8 1544 aa11.77□□□□□ -0.52
GTF2B-205ENST00000471471 IQGAP2Q13576 1575 aa11.77□□□□□ -0.53
GTF2B-205ENST00000471471 SPATA31D1Q6ZQQ2 1576 aa11.77□□□□□ -0.53
GTF2B-205ENST00000471471 APLP2Q06481 763 aa11.77□□□□□ -0.53
GTF2B-205ENST00000471471 MADDQ8WXG6 1647 aa11.77□□□□□ -0.53
GTF2B-205ENST00000471471 BCORL1Q5H9F3 1711 aa11.75□□□□□ -0.53
GTF2B-205ENST00000471471 CARMIL1Q5VZK9 1371 aa11.73□□□□□ -0.53
GTF2B-205ENST00000471471 KIF27Q86VH2 1401 aa11.73□□□□□ -0.53
GTF2B-205ENST00000471471 KCNH8Q96L42 1107 aa11.72□□□□□ -0.53
GTF2B-205ENST00000471471 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
GTF2B-205ENST00000471471 UGGT2Q9NYU1 1516 aa11.7□□□□□ -0.54
GTF2B-205ENST00000471471 KIAA0556O60303 1618 aa11.69□□□□□ -0.54
GTF2B-205ENST00000471471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.69□□□□□ -0.54
GTF2B-205ENST00000471471 HNRNPUL2Q1KMD3 747 aaKnown RBP11.69□□□□□ -0.54
GTF2B-205ENST00000471471 RIMS1Q86UR5 1692 aaKnown RBP11.68□□□□□ -0.54
GTF2B-205ENST00000471471 RAPGEF3O95398 923 aa11.68□□□□□ -0.54
GTF2B-205ENST00000471471 FRMPD1Q5SYB0 1578 aa11.66□□□□□ -0.54
GTF2B-205ENST00000471471 ARID4BQ4LE39 1312 aaPredicted RBP11.65□□□□□ -0.54
GTF2B-205ENST00000471471 PHLDB1Q86UU1 1377 aa11.65□□□□□ -0.55
GTF2B-205ENST00000471471 ABCA8O94911 1581 aa11.64□□□□□ -0.55
GTF2B-205ENST00000471471 SAMD1Q6SPF0 538 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms