RNA–Protein interactions for RNA: ENST00000471158.1

RFT1-204, Transcript of RFT1 homolog, humanhuman

TSL 3

Gene RFT1, Length 924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-204ENST00000471158 SYNJ2O15056 1496 aa18.96■□□□□ 0.63
RFT1-204ENST00000471158 RANGAP1P46060 587 aaPredicted RBP18.93■□□□□ 0.62
RFT1-204ENST00000471158 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
RFT1-204ENST00000471158 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
RFT1-204ENST00000471158 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
RFT1-204ENST00000471158 VPS8Q8N3P4 1428 aa18.89■□□□□ 0.61
RFT1-204ENST00000471158 ARHGAP35Q9NRY4 1499 aa18.88■□□□□ 0.61
RFT1-204ENST00000471158 KIAA0586Q9BVV6 1533 aa18.84■□□□□ 0.61
RFT1-204ENST00000471158 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
RFT1-204ENST00000471158 FBLN2P98095 1184 aa18.84■□□□□ 0.61
RFT1-204ENST00000471158 IQGAP2Q13576 1575 aa18.84■□□□□ 0.61
RFT1-204ENST00000471158 NUP160Q12769 1436 aa18.8■□□□□ 0.6
RFT1-204ENST00000471158 APLP2Q06481 763 aa18.78■□□□□ 0.6
RFT1-204ENST00000471158 SAMD9Q5K651 1589 aa18.77■□□□□ 0.6
RFT1-204ENST00000471158 UGGT2Q9NYU1 1516 aa18.76■□□□□ 0.59
RFT1-204ENST00000471158 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
RFT1-204ENST00000471158 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
RFT1-204ENST00000471158 CHD1O14646 1710 aa18.72■□□□□ 0.59
RFT1-204ENST00000471158 P3H3Q8IVL6 736 aa18.71■□□□□ 0.59
RFT1-204ENST00000471158 FHOD3Q2V2M9 1422 aa18.71■□□□□ 0.59
RFT1-204ENST00000471158 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
RFT1-204ENST00000471158 JPH4Q96JJ6 628 aa18.67■□□□□ 0.58
RFT1-204ENST00000471158 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
RFT1-204ENST00000471158 CASKIN1Q8WXD9 1431 aa18.65■□□□□ 0.58
RFT1-204ENST00000471158 FYCO1Q9BQS8 1478 aa18.64■□□□□ 0.57
RFT1-204ENST00000471158 MAP3K1Q13233 1512 aa18.64■□□□□ 0.57
RFT1-204ENST00000471158 KIAA0556O60303 1618 aa18.63■□□□□ 0.57
RFT1-204ENST00000471158 DISP1Q96F81 1524 aa18.63■□□□□ 0.57
RFT1-204ENST00000471158 PCF11O94913 1555 aaKnown RBP18.59■□□□□ 0.57
RFT1-204ENST00000471158 PPARGC1BQ86YN6 1023 aaKnown RBP18.58■□□□□ 0.56
RFT1-204ENST00000471158 ATP1B4Q9UN42 357 aaPredicted RBP18.55■□□□□ 0.56
RFT1-204ENST00000471158 SHROOM2Q13796 1616 aa18.55■□□□□ 0.56
RFT1-204ENST00000471158 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
RFT1-204ENST00000471158 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
RFT1-204ENST00000471158 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
RFT1-204ENST00000471158 PRG4Q92954 1404 aaPredicted RBP18.53■□□□□ 0.56
RFT1-204ENST00000471158 HECW1Q76N89 1606 aa18.52■□□□□ 0.55
RFT1-204ENST00000471158 CFAP43Q8NDM7 1665 aa18.51■□□□□ 0.55
RFT1-204ENST00000471158 CCDC18Q5T9S5 1454 aa18.51■□□□□ 0.55
RFT1-204ENST00000471158 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
RFT1-204ENST00000471158 TTBK1Q5TCY1 1321 aaPredicted RBP18.47■□□□□ 0.55
RFT1-204ENST00000471158 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
RFT1-204ENST00000471158 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
RFT1-204ENST00000471158 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
RFT1-204ENST00000471158 PTPRGP23470 1445 aa18.44■□□□□ 0.54
RFT1-204ENST00000471158 EPRSP07814 1512 aaKnown RBP18.42■□□□□ 0.54
RFT1-204ENST00000471158 MTUS2Q5JR59 1369 aa18.39■□□□□ 0.53
RFT1-204ENST00000471158 ABCA8O94911 1581 aa18.38■□□□□ 0.53
RFT1-204ENST00000471158 LRRIQ1Q96JM4 1722 aa18.38■□□□□ 0.53
RFT1-204ENST00000471158 CDK11AQ9UQ88 783 aaPredicted RBP18.38■□□□□ 0.53
RFT1-204ENST00000471158 NUP153P49790 1475 aaKnown RBP18.38■□□□□ 0.53
RFT1-204ENST00000471158 PLB1Q6P1J6 1458 aa18.37■□□□□ 0.53
RFT1-204ENST00000471158 EHBP1L1Q8N3D4 1523 aa18.36■□□□□ 0.53
RFT1-204ENST00000471158 UACAQ9BZF9 1416 aa18.33■□□□□ 0.53
RFT1-204ENST00000471158 ERCC6L2Q5T890 1561 aa18.32■□□□□ 0.52
RFT1-204ENST00000471158 CDK13Q14004 1512 aaKnown RBP18.31■□□□□ 0.52
RFT1-204ENST00000471158 SUPT6HQ7KZ85 1726 aaKnown RBP18.31■□□□□ 0.52
RFT1-204ENST00000471158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.3■□□□□ 0.52
RFT1-204ENST00000471158 HNRNPUL2Q1KMD3 747 aaKnown RBP18.3■□□□□ 0.52
RFT1-204ENST00000471158 RRBP1Q9P2E9 1410 aaKnown RBP18.3■□□□□ 0.52
RFT1-204ENST00000471158 UHRF1BP1LA0JNW5 1464 aa18.26■□□□□ 0.51
RFT1-204ENST00000471158 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
RFT1-204ENST00000471158 ABCC2Q92887 1545 aa18.26■□□□□ 0.51
RFT1-204ENST00000471158 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
RFT1-204ENST00000471158 ATP10BO94823 1461 aa18.25■□□□□ 0.51
RFT1-204ENST00000471158 NCOA2Q15596 1464 aa18.25■□□□□ 0.51
RFT1-204ENST00000471158 MAGI3Q5TCQ9 1506 aa18.24■□□□□ 0.51
RFT1-204ENST00000471158 PLEKHD1A6NEE1 506 aa18.24■□□□□ 0.51
RFT1-204ENST00000471158 PHLDB1Q86UU1 1377 aa18.24■□□□□ 0.51
RFT1-204ENST00000471158 TROQ12816 1431 aaPredicted RBP18.23■□□□□ 0.51
RFT1-204ENST00000471158 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
RFT1-204ENST00000471158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.2■□□□□ 0.5
RFT1-204ENST00000471158 FOXD1Q16676 465 aa18.2■□□□□ 0.5
RFT1-204ENST00000471158 MYOM3Q5VTT5 1437 aa18.2■□□□□ 0.5
RFT1-204ENST00000471158 FGD6Q6ZV73 1430 aa18.17■□□□□ 0.5
RFT1-204ENST00000471158 ADCY10Q96PN6 1610 aa18.17■□□□□ 0.5
RFT1-204ENST00000471158 KDM5BQ9UGL1 1544 aa18.15■□□□□ 0.5
RFT1-204ENST00000471158 MIA2Q96PC5 1412 aa18.15■□□□□ 0.5
RFT1-204ENST00000471158 KIF14Q15058 1648 aa18.13■□□□□ 0.49
RFT1-204ENST00000471158 FAM50AQ14320 339 aaKnown RBP18.13■□□□□ 0.49
RFT1-204ENST00000471158 ZCCHC11Q5TAX3 1644 aaKnown RBP18.11■□□□□ 0.49
RFT1-204ENST00000471158 ITSN2Q9NZM3 1697 aa18.09■□□□□ 0.49
RFT1-204ENST00000471158 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
RFT1-204ENST00000471158 TCOF1Q13428 1488 aaKnown RBP18.08■□□□□ 0.49
RFT1-204ENST00000471158 NPM1P06748 294 aaKnown RBP eCLIP18.07■□□□□ 0.48
RFT1-204ENST00000471158 ABCC10Q5T3U5 1492 aa18.05■□□□□ 0.48
RFT1-204ENST00000471158 GPATCH8Q9UKJ3 1502 aaKnown RBP18.04■□□□□ 0.48
RFT1-204ENST00000471158 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
RFT1-204ENST00000471158 ITGAEP38570 1179 aa18.02■□□□□ 0.48
RFT1-204ENST00000471158 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
RFT1-204ENST00000471158 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
RFT1-204ENST00000471158 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
RFT1-204ENST00000471158 WDR7Q9Y4E6 1490 aa17.99■□□□□ 0.47
RFT1-204ENST00000471158 CDC42BPAQ5VT25 1732 aa17.98■□□□□ 0.47
RFT1-204ENST00000471158 KCNH8Q96L42 1107 aa17.97■□□□□ 0.47
RFT1-204ENST00000471158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.96■□□□□ 0.47
RFT1-204ENST00000471158 ZEB1P37275 1124 aaPredicted RBP17.95■□□□□ 0.46
RFT1-204ENST00000471158 ASXL2Q76L83 1435 aa17.95■□□□□ 0.46
RFT1-204ENST00000471158 PREX2Q70Z35 1606 aa17.94■□□□□ 0.46
RFT1-204ENST00000471158 HRCP23327 699 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms