RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 CHMP7Q8WUX9 453 aaPredicted RBP24.12■■□□□ 1.45
COL4A5-203ENST00000470339 CHD1O14646 1710 aa24.04■■□□□ 1.44
COL4A5-203ENST00000470339 KIAA0586Q9BVV6 1533 aa24.03■■□□□ 1.44
COL4A5-203ENST00000470339 NUP160Q12769 1436 aa24.02■■□□□ 1.44
COL4A5-203ENST00000470339 IQGAP2Q13576 1575 aa24.02■■□□□ 1.44
COL4A5-203ENST00000470339 FBLN2P98095 1184 aa24.01■■□□□ 1.43
COL4A5-203ENST00000470339 EFCAB5A4FU69 1503 aa24■■□□□ 1.43
COL4A5-203ENST00000470339 CEP170Q5SW79 1584 aa23.99■■□□□ 1.43
COL4A5-203ENST00000470339 ARHGAP35Q9NRY4 1499 aa23.98■■□□□ 1.43
COL4A5-203ENST00000470339 RANGAP1P46060 587 aaPredicted RBP23.94■■□□□ 1.42
COL4A5-203ENST00000470339 SAMD9Q5K651 1589 aa23.93■■□□□ 1.42
COL4A5-203ENST00000470339 UGGT2Q9NYU1 1516 aa23.93■■□□□ 1.42
COL4A5-203ENST00000470339 ARAP1Q96P48 1450 aa23.92■■□□□ 1.42
COL4A5-203ENST00000470339 VPS8Q8N3P4 1428 aa23.9■■□□□ 1.42
COL4A5-203ENST00000470339 JPH4Q96JJ6 628 aa23.8■■□□□ 1.4
COL4A5-203ENST00000470339 CLASP1Q7Z460 1538 aa23.77■■□□□ 1.4
COL4A5-203ENST00000470339 DISP1Q96F81 1524 aa23.77■■□□□ 1.4
COL4A5-203ENST00000470339 KIAA0556O60303 1618 aa23.77■■□□□ 1.4
COL4A5-203ENST00000470339 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
COL4A5-203ENST00000470339 FHOD3Q2V2M9 1422 aa23.76■■□□□ 1.39
COL4A5-203ENST00000470339 FMN1Q68DA7 1419 aa23.76■■□□□ 1.39
COL4A5-203ENST00000470339 P3H3Q8IVL6 736 aa23.75■■□□□ 1.39
COL4A5-203ENST00000470339 CARMIL2Q6F5E8 1435 aa23.74■■□□□ 1.39
COL4A5-203ENST00000470339 OSCARQ8IYS5 282 aa23.67■■□□□ 1.38
COL4A5-203ENST00000470339 CASKIN1Q8WXD9 1431 aa23.67■■□□□ 1.38
COL4A5-203ENST00000470339 FYCO1Q9BQS8 1478 aa23.66■■□□□ 1.38
COL4A5-203ENST00000470339 PRG4Q92954 1404 aaPredicted RBP23.65■■□□□ 1.38
COL4A5-203ENST00000470339 APLP2Q06481 763 aa23.64■■□□□ 1.37
COL4A5-203ENST00000470339 MAP3K1Q13233 1512 aa23.64■■□□□ 1.37
COL4A5-203ENST00000470339 PCF11O94913 1555 aaKnown RBP23.63■■□□□ 1.37
COL4A5-203ENST00000470339 HECW1Q76N89 1606 aa23.54■■□□□ 1.36
COL4A5-203ENST00000470339 CFAP43Q8NDM7 1665 aa23.53■■□□□ 1.36
COL4A5-203ENST00000470339 TIAM1Q13009 1591 aa23.52■■□□□ 1.36
COL4A5-203ENST00000470339 RAPGEF6Q8TEU7 1601 aa23.51■■□□□ 1.35
COL4A5-203ENST00000470339 PTPRGP23470 1445 aa23.5■■□□□ 1.35
COL4A5-203ENST00000470339 LRRIQ1Q96JM4 1722 aa23.49■■□□□ 1.35
COL4A5-203ENST00000470339 ERCC6L2Q5T890 1561 aa23.48■■□□□ 1.35
COL4A5-203ENST00000470339 CCDC18Q5T9S5 1454 aa23.48■■□□□ 1.35
COL4A5-203ENST00000470339 ABCA8O94911 1581 aa23.47■■□□□ 1.35
COL4A5-203ENST00000470339 ATP1B4Q9UN42 357 aaPredicted RBP23.46■■□□□ 1.35
COL4A5-203ENST00000470339 EPRSP07814 1512 aaKnown RBP23.43■■□□□ 1.34
COL4A5-203ENST00000470339 PPARGC1BQ86YN6 1023 aaKnown RBP23.42■■□□□ 1.34
COL4A5-203ENST00000470339 PLB1Q6P1J6 1458 aa23.42■■□□□ 1.34
COL4A5-203ENST00000470339 NUP153P49790 1475 aaKnown RBP23.41■■□□□ 1.34
COL4A5-203ENST00000470339 LRRC9Q6ZRR7 1453 aa23.41■■□□□ 1.34
COL4A5-203ENST00000470339 TTBK1Q5TCY1 1321 aaPredicted RBP23.4■■□□□ 1.34
COL4A5-203ENST00000470339 TRIM26Q12899 539 aaPredicted RBP23.4■■□□□ 1.34
COL4A5-203ENST00000470339 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.33
COL4A5-203ENST00000470339 UACAQ9BZF9 1416 aa23.37■■□□□ 1.33
COL4A5-203ENST00000470339 UHRF1BP1LA0JNW5 1464 aa23.33■■□□□ 1.33
COL4A5-203ENST00000470339 ABCC2Q92887 1545 aa23.32■■□□□ 1.32
COL4A5-203ENST00000470339 CDK13Q14004 1512 aaKnown RBP23.31■■□□□ 1.32
COL4A5-203ENST00000470339 EHBP1L1Q8N3D4 1523 aa23.3■■□□□ 1.32
COL4A5-203ENST00000470339 MTUS2Q5JR59 1369 aa23.29■■□□□ 1.32
COL4A5-203ENST00000470339 CDK11AQ9UQ88 783 aaPredicted RBP23.29■■□□□ 1.32
COL4A5-203ENST00000470339 ATP10BO94823 1461 aa23.28■■□□□ 1.32
COL4A5-203ENST00000470339 SUPT6HQ7KZ85 1726 aaKnown RBP23.25■■□□□ 1.31
COL4A5-203ENST00000470339 ARHGEF11O15085 1522 aa23.24■■□□□ 1.31
COL4A5-203ENST00000470339 MAGI3Q5TCQ9 1506 aa23.24■■□□□ 1.31
COL4A5-203ENST00000470339 KDM5BQ9UGL1 1544 aa23.2■■□□□ 1.3
COL4A5-203ENST00000470339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.2■■□□□ 1.3
COL4A5-203ENST00000470339 HNRNPUL2Q1KMD3 747 aaKnown RBP23.2■■□□□ 1.3
COL4A5-203ENST00000470339 ARID3CA6NKF2 412 aa23.19■■□□□ 1.3
COL4A5-203ENST00000470339 PCGF6Q9BYE7 350 aa23.19■■□□□ 1.3
COL4A5-203ENST00000470339 ADCY10Q96PN6 1610 aa23.19■■□□□ 1.3
COL4A5-203ENST00000470339 TROQ12816 1431 aaPredicted RBP23.18■■□□□ 1.3
COL4A5-203ENST00000470339 RIMBP3CA6NJZ7 1639 aa23.18■■□□□ 1.3
COL4A5-203ENST00000470339 RIMBP3BA6NNM3 1639 aa23.18■■□□□ 1.3
COL4A5-203ENST00000470339 RIMBP3Q9UFD9 1639 aa23.18■■□□□ 1.3
COL4A5-203ENST00000470339 PLEKHD1A6NEE1 506 aa23.17■■□□□ 1.3
COL4A5-203ENST00000470339 NCOA2Q15596 1464 aa23.16■■□□□ 1.3
COL4A5-203ENST00000470339 ZCCHC11Q5TAX3 1644 aaKnown RBP23.15■■□□□ 1.3
COL4A5-203ENST00000470339 RRBP1Q9P2E9 1410 aaKnown RBP23.15■■□□□ 1.3
COL4A5-203ENST00000470339 PHLDB1Q86UU1 1377 aa23.13■■□□□ 1.29
COL4A5-203ENST00000470339 MYOM3Q5VTT5 1437 aa23.08■■□□□ 1.28
COL4A5-203ENST00000470339 CCNB3Q8WWL7 1395 aa23.07■■□□□ 1.28
COL4A5-203ENST00000470339 KIF14Q15058 1648 aa23.07■■□□□ 1.28
COL4A5-203ENST00000470339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.28
COL4A5-203ENST00000470339 FGD6Q6ZV73 1430 aa23.03■■□□□ 1.28
COL4A5-203ENST00000470339 MIA2Q96PC5 1412 aa23.02■■□□□ 1.28
COL4A5-203ENST00000470339 NPM1P06748 294 aaKnown RBP eCLIP23.02■■□□□ 1.28
COL4A5-203ENST00000470339 ITSN2Q9NZM3 1697 aa23.01■■□□□ 1.27
COL4A5-203ENST00000470339 ABCC10Q5T3U5 1492 aa22.99■■□□□ 1.27
COL4A5-203ENST00000470339 CYB5RLQ6IPT4 315 aa22.97■■□□□ 1.27
COL4A5-203ENST00000470339 WDR7Q9Y4E6 1490 aa22.96■■□□□ 1.27
COL4A5-203ENST00000470339 PTPN23Q9H3S7 1636 aa22.96■■□□□ 1.27
COL4A5-203ENST00000470339 CDC42BPAQ5VT25 1732 aa22.96■■□□□ 1.27
COL4A5-203ENST00000470339 GPATCH8Q9UKJ3 1502 aaKnown RBP22.95■■□□□ 1.26
COL4A5-203ENST00000470339 TCOF1Q13428 1488 aaKnown RBP22.94■■□□□ 1.26
COL4A5-203ENST00000470339 ASXL2Q76L83 1435 aa22.92■■□□□ 1.26
COL4A5-203ENST00000470339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.92■■□□□ 1.26
COL4A5-203ENST00000470339 FAM50AQ14320 339 aaKnown RBP22.89■■□□□ 1.25
COL4A5-203ENST00000470339 MYO5CQ9NQX4 1742 aa22.88■■□□□ 1.25
COL4A5-203ENST00000470339 MAPKBP1O60336 1514 aa22.88■■□□□ 1.25
COL4A5-203ENST00000470339 PREX2Q70Z35 1606 aa22.88■■□□□ 1.25
COL4A5-203ENST00000470339 TTC37Q6PGP7 1564 aa22.88■■□□□ 1.25
COL4A5-203ENST00000470339 KCNH8Q96L42 1107 aa22.87■■□□□ 1.25
COL4A5-203ENST00000470339 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
COL4A5-203ENST00000470339 CDC42BPBQ9Y5S2 1711 aa22.87■■□□□ 1.25
COL4A5-203ENST00000470339 ABCA9Q8IUA7 1624 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms