RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 MYT1Q01538 1121 aa29.81■■■□□ 2.36
CDHR3-207ENST00000470188 KIF21AQ7Z4S6 1674 aa29.81■■■□□ 2.36
CDHR3-207ENST00000470188 CCNB3Q8WWL7 1395 aa29.81■■■□□ 2.36
CDHR3-207ENST00000470188 FHAD1B1AJZ9 1412 aa29.81■■■□□ 2.36
CDHR3-207ENST00000470188 ZNF316A6NFI3 1004 aaPredicted RBP29.8■■■□□ 2.36
CDHR3-207ENST00000470188 WDR97A6NE52 1622 aa29.8■■■□□ 2.36
CDHR3-207ENST00000470188 GTF3C3Q9Y5Q9 886 aa29.76■■■□□ 2.35
CDHR3-207ENST00000470188 CLSPNQ9HAW4 1339 aa29.73■■■□□ 2.35
CDHR3-207ENST00000470188 EFCAB5A4FU69 1503 aa29.73■■■□□ 2.35
CDHR3-207ENST00000470188 DHX57Q6P158 1386 aaKnown RBP29.72■■■□□ 2.35
CDHR3-207ENST00000470188 LRRC9Q6ZRR7 1453 aa29.71■■■□□ 2.35
CDHR3-207ENST00000470188 P3H3Q8IVL6 736 aa29.71■■■□□ 2.35
CDHR3-207ENST00000470188 PCF11O94913 1555 aaKnown RBP29.71■■■□□ 2.35
CDHR3-207ENST00000470188 CTTNBP2Q8WZ74 1663 aa29.7■■■□□ 2.34
CDHR3-207ENST00000470188 ABCA5Q8WWZ7 1642 aa29.69■■■□□ 2.34
CDHR3-207ENST00000470188 FHOD3Q2V2M9 1422 aa29.67■■■□□ 2.34
CDHR3-207ENST00000470188 TDRD9Q8NDG6 1382 aaKnown RBP29.67■■■□□ 2.34
CDHR3-207ENST00000470188 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
CDHR3-207ENST00000470188 GAPVD1Q14C86 1478 aa29.64■■■□□ 2.34
CDHR3-207ENST00000470188 FYCO1Q9BQS8 1478 aa29.61■■■□□ 2.33
CDHR3-207ENST00000470188 AQRO60306 1485 aaKnown RBP eCLIP29.58■■■□□ 2.33
CDHR3-207ENST00000470188 ITGAEP38570 1179 aa29.58■■■□□ 2.33
CDHR3-207ENST00000470188 CASKIN1Q8WXD9 1431 aa29.58■■■□□ 2.33
CDHR3-207ENST00000470188 ATP1B4Q9UN42 357 aaPredicted RBP29.57■■■□□ 2.32
CDHR3-207ENST00000470188 PHLDB1Q86UU1 1377 aa29.57■■■□□ 2.32
CDHR3-207ENST00000470188 MRC2Q9UBG0 1479 aa29.54■■■□□ 2.32
CDHR3-207ENST00000470188 ERCC6Q03468 1493 aa29.53■■■□□ 2.32
CDHR3-207ENST00000470188 FMN1Q68DA7 1419 aa29.51■■■□□ 2.32
CDHR3-207ENST00000470188 TARBP1Q13395 1621 aaKnown RBP29.51■■■□□ 2.31
CDHR3-207ENST00000470188 SAMD9Q5K651 1589 aa29.46■■■□□ 2.31
CDHR3-207ENST00000470188 RAB3GAP2Q9H2M9 1393 aa29.45■■■□□ 2.3
CDHR3-207ENST00000470188 SNAPC4Q5SXM2 1469 aa29.43■■■□□ 2.3
CDHR3-207ENST00000470188 FAM50AQ14320 339 aaKnown RBP29.42■■■□□ 2.3
CDHR3-207ENST00000470188 WDR62O43379 1518 aa29.4■■■□□ 2.3
CDHR3-207ENST00000470188 SETD5Q9C0A6 1442 aa29.38■■■□□ 2.29
CDHR3-207ENST00000470188 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
CDHR3-207ENST00000470188 PBRM1Q86U86 1689 aa29.34■■■□□ 2.29
CDHR3-207ENST00000470188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.31■■■□□ 2.28
CDHR3-207ENST00000470188 GRIN2BQ13224 1484 aa29.28■■■□□ 2.28
CDHR3-207ENST00000470188 MTUS2Q5JR59 1369 aa29.28■■■□□ 2.28
CDHR3-207ENST00000470188 MAPKBP1O60336 1514 aa29.27■■■□□ 2.28
CDHR3-207ENST00000470188 ADAMTS12P58397 1594 aa29.25■■■□□ 2.27
CDHR3-207ENST00000470188 MIER1Q8N108 512 aa29.25■■■□□ 2.27
CDHR3-207ENST00000470188 FGD6Q6ZV73 1430 aa29.24■■■□□ 2.27
CDHR3-207ENST00000470188 LRRIQ1Q96JM4 1722 aa29.23■■■□□ 2.27
CDHR3-207ENST00000470188 IQGAP2Q13576 1575 aa29.18■■■□□ 2.26
CDHR3-207ENST00000470188 IFT140Q96RY7 1462 aa29.17■■■□□ 2.26
CDHR3-207ENST00000470188 EHBP1L1Q8N3D4 1523 aa29.14■■■□□ 2.26
CDHR3-207ENST00000470188 NCOA2Q15596 1464 aa29.14■■■□□ 2.26
CDHR3-207ENST00000470188 SUPT6HQ7KZ85 1726 aaKnown RBP29.11■■■□□ 2.25
CDHR3-207ENST00000470188 CCDC18Q5T9S5 1454 aa29.11■■■□□ 2.25
CDHR3-207ENST00000470188 YTHDC1Q96MU7 727 aaKnown RBP29.11■■■□□ 2.25
CDHR3-207ENST00000470188 ZNF608Q9ULD9 1512 aaPredicted RBP29.1■■■□□ 2.25
CDHR3-207ENST00000470188 MYOM3Q5VTT5 1437 aa29.1■■■□□ 2.25
CDHR3-207ENST00000470188 HECW1Q76N89 1606 aa29.07■■■□□ 2.24
CDHR3-207ENST00000470188 UGGT2Q9NYU1 1516 aa29.03■■■□□ 2.24
CDHR3-207ENST00000470188 MAGI3Q5TCQ9 1506 aa29.02■■■□□ 2.24
CDHR3-207ENST00000470188 ARHGEF11O15085 1522 aa29.01■■■□□ 2.23
CDHR3-207ENST00000470188 PTPRKQ15262 1439 aa29■■■□□ 2.23
CDHR3-207ENST00000470188 HFM1A2PYH4 1435 aa28.99■■■□□ 2.23
CDHR3-207ENST00000470188 SIN3AQ96ST3 1273 aa28.99■■■□□ 2.23
CDHR3-207ENST00000470188 EPRSP07814 1512 aaKnown RBP28.98■■■□□ 2.23
CDHR3-207ENST00000470188 PTPN23Q9H3S7 1636 aa28.96■■■□□ 2.23
CDHR3-207ENST00000470188 EIF4G3O43432 1585 aaKnown RBP28.94■■■□□ 2.22
CDHR3-207ENST00000470188 KIAA0586Q9BVV6 1533 aa28.94■■■□□ 2.22
CDHR3-207ENST00000470188 TIMELESSQ9UNS1 1208 aa28.94■■■□□ 2.22
CDHR3-207ENST00000470188 CDK13Q14004 1512 aaKnown RBP28.9■■■□□ 2.22
CDHR3-207ENST00000470188 GRIN2AQ12879 1464 aa28.9■■■□□ 2.22
CDHR3-207ENST00000470188 NAIPQ13075 1403 aa28.89■■■□□ 2.22
CDHR3-207ENST00000470188 UACAQ9BZF9 1416 aa28.88■■■□□ 2.21
CDHR3-207ENST00000470188 TCOF1Q13428 1488 aaKnown RBP28.88■■■□□ 2.21
CDHR3-207ENST00000470188 KIAA0556O60303 1618 aa28.87■■■□□ 2.21
CDHR3-207ENST00000470188 DISP1Q96F81 1524 aa28.86■■■□□ 2.21
CDHR3-207ENST00000470188 MAGI1Q96QZ7 1491 aaPredicted RBP28.81■■■□□ 2.2
CDHR3-207ENST00000470188 ARID3CA6NKF2 412 aa28.81■■■□□ 2.2
CDHR3-207ENST00000470188 MIA2Q96PC5 1412 aa28.8■■■□□ 2.2
CDHR3-207ENST00000470188 PPP1R15AO75807 674 aaPredicted RBP28.75■■■□□ 2.19
CDHR3-207ENST00000470188 SYNJ2O15056 1496 aa28.73■■■□□ 2.19
CDHR3-207ENST00000470188 NUP153P49790 1475 aaKnown RBP28.73■■■□□ 2.19
CDHR3-207ENST00000470188 CHMP7Q8WUX9 453 aaPredicted RBP28.72■■■□□ 2.19
CDHR3-207ENST00000470188 RAPGEF6Q8TEU7 1601 aa28.72■■■□□ 2.19
CDHR3-207ENST00000470188 TONSLQ96HA7 1378 aa28.72■■■□□ 2.19
CDHR3-207ENST00000470188 AKNAQ7Z591 1439 aa28.72■■■□□ 2.19
CDHR3-207ENST00000470188 RRP7BPQ9NSQ0 103 aa28.71■■■□□ 2.19
CDHR3-207ENST00000470188 GCC2Q8IWJ2 1684 aa28.71■■■□□ 2.19
CDHR3-207ENST00000470188 CHIC2Q9UKJ5 165 aa28.71■■■□□ 2.19
CDHR3-207ENST00000470188 CEP170Q5SW79 1584 aa28.69■■■□□ 2.18
CDHR3-207ENST00000470188 CDK11AQ9UQ88 783 aaPredicted RBP28.64■■■□□ 2.17
CDHR3-207ENST00000470188 FBLN2P98095 1184 aa28.62■■■□□ 2.17
CDHR3-207ENST00000470188 NUP160Q12769 1436 aa28.59■■■□□ 2.17
CDHR3-207ENST00000470188 KDM6BO15054 1643 aa28.57■■■□□ 2.16
CDHR3-207ENST00000470188 TRIM52Q96A61 297 aa28.56■■■□□ 2.16
CDHR3-207ENST00000470188 DAPK1P53355 1430 aa28.56■■■□□ 2.16
CDHR3-207ENST00000470188 CARMIL2Q6F5E8 1435 aa28.56■■■□□ 2.16
CDHR3-207ENST00000470188 DDX10Q13206 875 aaKnown RBP28.55■■■□□ 2.16
CDHR3-207ENST00000470188 PLB1Q6P1J6 1458 aa28.54■■■□□ 2.16
CDHR3-207ENST00000470188 SUPT16HQ9Y5B9 1047 aaKnown RBP28.54■■■□□ 2.16
CDHR3-207ENST00000470188 TROQ12816 1431 aaPredicted RBP28.53■■■□□ 2.16
CDHR3-207ENST00000470188 ROCK1Q13464 1354 aa28.53■■■□□ 2.16
CDHR3-207ENST00000470188 DNMT1P26358 1616 aaKnown RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms