RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 FBLN2P98095 1184 aa15.5■□□□□ 0.07
FN1-216ENST00000469569 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
FN1-216ENST00000469569 SNAPC4Q5SXM2 1469 aa15.49■□□□□ 0.07
FN1-216ENST00000469569 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
FN1-216ENST00000469569 SYNJ2O15056 1496 aa15.47■□□□□ 0.07
FN1-216ENST00000469569 KIF27Q86VH2 1401 aa15.47■□□□□ 0.07
FN1-216ENST00000469569 ERICH3Q5RHP9 1530 aa15.47■□□□□ 0.07
FN1-216ENST00000469569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.07
FN1-216ENST00000469569 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
FN1-216ENST00000469569 PBRM1Q86U86 1689 aa15.44■□□□□ 0.06
FN1-216ENST00000469569 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
FN1-216ENST00000469569 CHD1O14646 1710 aa15.38■□□□□ 0.05
FN1-216ENST00000469569 IGF1RP08069 1367 aa15.36■□□□□ 0.05
FN1-216ENST00000469569 ADAMTS12P58397 1594 aa15.35■□□□□ 0.05
FN1-216ENST00000469569 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
FN1-216ENST00000469569 CUL7Q14999 1698 aa15.3■□□□□ 0.04
FN1-216ENST00000469569 NUP160Q12769 1436 aa15.29■□□□□ 0.04
FN1-216ENST00000469569 CARMIL1Q5VZK9 1371 aa15.29■□□□□ 0.04
FN1-216ENST00000469569 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.04
FN1-216ENST00000469569 ARHGEF11O15085 1522 aa15.24■□□□□ 0.03
FN1-216ENST00000469569 EEA1Q15075 1411 aa15.24■□□□□ 0.03
FN1-216ENST00000469569 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
FN1-216ENST00000469569 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.02
FN1-216ENST00000469569 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.02
FN1-216ENST00000469569 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.02
FN1-216ENST00000469569 U3KPZ7 1027 aaPredicted RBP15.2■□□□□ 0.02
FN1-216ENST00000469569 RAPGEF2Q9Y4G8 1499 aa15.2■□□□□ 0.02
FN1-216ENST00000469569 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
FN1-216ENST00000469569 KIAA0586Q9BVV6 1533 aa15.19■□□□□ 0.02
FN1-216ENST00000469569 JPH4Q96JJ6 628 aa15.19■□□□□ 0.02
FN1-216ENST00000469569 RUSC2Q8N2Y8 1516 aa15.16■□□□□ 0.02
FN1-216ENST00000469569 CYB5RLQ6IPT4 315 aa15.15■□□□□ 0.02
FN1-216ENST00000469569 SHROOM2Q13796 1616 aa15.12■□□□□ 0.01
FN1-216ENST00000469569 PRXQ9BXM0 1461 aa15.12■□□□□ 0.01
FN1-216ENST00000469569 PRG4Q92954 1404 aaPredicted RBP15.1■□□□□ 0.01
FN1-216ENST00000469569 ARAP1Q96P48 1450 aa15.1■□□□□ 0.01
FN1-216ENST00000469569 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
FN1-216ENST00000469569 CARMIL2Q6F5E8 1435 aa15.08■□□□□ 0
FN1-216ENST00000469569 IQGAP2Q13576 1575 aa15.06■□□□□ 0
FN1-216ENST00000469569 FAM9AQ8IZU1 332 aaPredicted RBP15.03■□□□□ -0
FN1-216ENST00000469569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.02■□□□□ -0
FN1-216ENST00000469569 HNRNPUL2Q1KMD3 747 aaKnown RBP15.02■□□□□ -0
FN1-216ENST00000469569 UGGT2Q9NYU1 1516 aa14.99□□□□□ -0.01
FN1-216ENST00000469569 GOLGA3Q08378 1498 aa14.99□□□□□ -0.01
FN1-216ENST00000469569 TNIKQ9UKE5 1360 aa14.98□□□□□ -0.01
FN1-216ENST00000469569 SAMD1Q6SPF0 538 aaPredicted RBP14.98□□□□□ -0.01
FN1-216ENST00000469569 ERCC6L2Q5T890 1561 aa14.98□□□□□ -0.01
FN1-216ENST00000469569 PTPRGP23470 1445 aa14.97□□□□□ -0.01
FN1-216ENST00000469569 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
FN1-216ENST00000469569 KIF21BO75037 1637 aa14.95□□□□□ -0.02
FN1-216ENST00000469569 CTTNBP2Q8WZ74 1663 aa14.95□□□□□ -0.02
FN1-216ENST00000469569 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
FN1-216ENST00000469569 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
FN1-216ENST00000469569 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
FN1-216ENST00000469569 UBTFP17480 764 aaKnown RBP14.9□□□□□ -0.02
FN1-216ENST00000469569 KIAA0556O60303 1618 aa14.88□□□□□ -0.03
FN1-216ENST00000469569 TRHP20396 242 aaPredicted RBP14.86□□□□□ -0.03
FN1-216ENST00000469569 UHRF1BP1LA0JNW5 1464 aa14.86□□□□□ -0.03
FN1-216ENST00000469569 UACAQ9BZF9 1416 aa14.85□□□□□ -0.03
FN1-216ENST00000469569 APLP2Q06481 763 aa14.84□□□□□ -0.03
FN1-216ENST00000469569 TTBK1Q5TCY1 1321 aaPredicted RBP14.84□□□□□ -0.03
FN1-216ENST00000469569 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
FN1-216ENST00000469569 EFCAB5A4FU69 1503 aa14.81□□□□□ -0.04
FN1-216ENST00000469569 ABCC2Q92887 1545 aa14.81□□□□□ -0.04
FN1-216ENST00000469569 ADCY10Q96PN6 1610 aa14.8□□□□□ -0.04
FN1-216ENST00000469569 SAMD9Q5K651 1589 aa14.78□□□□□ -0.04
FN1-216ENST00000469569 MAPKBP1O60336 1514 aa14.78□□□□□ -0.04
FN1-216ENST00000469569 P3H3Q8IVL6 736 aa14.77□□□□□ -0.05
FN1-216ENST00000469569 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
FN1-216ENST00000469569 KDM5BQ9UGL1 1544 aa14.76□□□□□ -0.05
FN1-216ENST00000469569 PLB1Q6P1J6 1458 aa14.76□□□□□ -0.05
FN1-216ENST00000469569 RANGAP1P46060 587 aaPredicted RBP14.75□□□□□ -0.05
FN1-216ENST00000469569 ABCA8O94911 1581 aa14.73□□□□□ -0.05
FN1-216ENST00000469569 ABCC10Q5T3U5 1492 aa14.71□□□□□ -0.05
FN1-216ENST00000469569 CAPN15O75808 1086 aa14.71□□□□□ -0.05
FN1-216ENST00000469569 FMN1Q68DA7 1419 aa14.71□□□□□ -0.05
FN1-216ENST00000469569 FAM69CQ0P6D2 419 aa14.7□□□□□ -0.06
FN1-216ENST00000469569 FHOD3Q2V2M9 1422 aa14.69□□□□□ -0.06
FN1-216ENST00000469569 ASXL2Q76L83 1435 aa14.69□□□□□ -0.06
FN1-216ENST00000469569 ARHGAP35Q9NRY4 1499 aa14.66□□□□□ -0.06
FN1-216ENST00000469569 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
FN1-216ENST00000469569 RAPGEF6Q8TEU7 1601 aa14.65□□□□□ -0.06
FN1-216ENST00000469569 ZCCHC11Q5TAX3 1644 aaKnown RBP14.64□□□□□ -0.07
FN1-216ENST00000469569 CLIP1P30622 1438 aa14.64□□□□□ -0.07
FN1-216ENST00000469569 WDR7Q9Y4E6 1490 aa14.63□□□□□ -0.07
FN1-216ENST00000469569 ZNF219Q9P2Y4 722 aaPredicted RBP14.63□□□□□ -0.07
FN1-216ENST00000469569 DIP2BQ9P265 1576 aa14.63□□□□□ -0.07
FN1-216ENST00000469569 ATP10BO94823 1461 aa14.63□□□□□ -0.07
FN1-216ENST00000469569 PLEKHD1A6NEE1 506 aa14.62□□□□□ -0.07
FN1-216ENST00000469569 GLI2P10070 1586 aa14.62□□□□□ -0.07
FN1-216ENST00000469569 CDK11AQ9UQ88 783 aaPredicted RBP14.62□□□□□ -0.07
FN1-216ENST00000469569 NUP153P49790 1475 aaKnown RBP14.6□□□□□ -0.07
FN1-216ENST00000469569 EPRSP07814 1512 aaKnown RBP14.6□□□□□ -0.07
FN1-216ENST00000469569 KIF13AQ9H1H9 1805 aa14.59□□□□□ -0.07
FN1-216ENST00000469569 KCNH8Q96L42 1107 aa14.57□□□□□ -0.08
FN1-216ENST00000469569 ATP1B4Q9UN42 357 aaPredicted RBP14.57□□□□□ -0.08
FN1-216ENST00000469569 HECW1Q76N89 1606 aa14.55□□□□□ -0.08
FN1-216ENST00000469569 ARID3CA6NKF2 412 aa14.55□□□□□ -0.08
FN1-216ENST00000469569 CEP162Q5TB80 1403 aa14.55□□□□□ -0.08
FN1-216ENST00000469569 CASKIN1Q8WXD9 1431 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms