RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 ABCA10Q8WWZ4 1543 aa14.11□□□□□ -0.15
GAPVD1-213ENST00000469498 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
GAPVD1-213ENST00000469498 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
GAPVD1-213ENST00000469498 RUSC2Q8N2Y8 1516 aa14.05□□□□□ -0.16
GAPVD1-213ENST00000469498 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
GAPVD1-213ENST00000469498 TDRD9Q8NDG6 1382 aaKnown RBP14.02□□□□□ -0.17
GAPVD1-213ENST00000469498 AQRO60306 1485 aaKnown RBP eCLIP14.01□□□□□ -0.173e-8■■□□□ 13.3
GAPVD1-213ENST00000469498 GAPVD1Q14C86 1478 aa14.01□□□□□ -0.17
GAPVD1-213ENST00000469498 KIF27Q86VH2 1401 aa14.01□□□□□ -0.17
GAPVD1-213ENST00000469498 ABCB7O75027 752 aa14.01□□□□□ -0.17
GAPVD1-213ENST00000469498 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
GAPVD1-213ENST00000469498 CUL7Q14999 1698 aa14□□□□□ -0.17
GAPVD1-213ENST00000469498 CHD1O14646 1710 aa13.98□□□□□ -0.17
GAPVD1-213ENST00000469498 ADAMTS12P58397 1594 aa13.97□□□□□ -0.17
GAPVD1-213ENST00000469498 ERICH3Q5RHP9 1530 aa13.97□□□□□ -0.17
GAPVD1-213ENST00000469498 EEA1Q15075 1411 aa13.96□□□□□ -0.18
GAPVD1-213ENST00000469498 GRIN2BQ13224 1484 aa13.95□□□□□ -0.18
GAPVD1-213ENST00000469498 FAM9AQ8IZU1 332 aaPredicted RBP13.95□□□□□ -0.18
GAPVD1-213ENST00000469498 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
GAPVD1-213ENST00000469498 SNAPC4Q5SXM2 1469 aa13.94□□□□□ -0.18
GAPVD1-213ENST00000469498 ZBTB22O15209 634 aa13.92□□□□□ -0.18
GAPVD1-213ENST00000469498 KIF21BO75037 1637 aa13.91□□□□□ -0.18
GAPVD1-213ENST00000469498 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
GAPVD1-213ENST00000469498 MAGI1Q96QZ7 1491 aaPredicted RBP13.89□□□□□ -0.19
GAPVD1-213ENST00000469498 CTTNBP2Q8WZ74 1663 aa13.88□□□□□ -0.19
GAPVD1-213ENST00000469498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
GAPVD1-213ENST00000469498 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
GAPVD1-213ENST00000469498 IGF1RP08069 1367 aa13.86□□□□□ -0.19
GAPVD1-213ENST00000469498 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
GAPVD1-213ENST00000469498 FHAD1B1AJZ9 1412 aa13.83□□□□□ -0.2
GAPVD1-213ENST00000469498 SYNJ2O15056 1496 aa13.83□□□□□ -0.2
GAPVD1-213ENST00000469498 PRXQ9BXM0 1461 aa13.83□□□□□ -0.2
GAPVD1-213ENST00000469498 CARMIL1Q5VZK9 1371 aa13.82□□□□□ -0.2
GAPVD1-213ENST00000469498 RAPGEF2Q9Y4G8 1499 aa13.81□□□□□ -0.2
GAPVD1-213ENST00000469498 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
GAPVD1-213ENST00000469498 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
GAPVD1-213ENST00000469498 GOLGA3Q08378 1498 aa13.8□□□□□ -0.2
GAPVD1-213ENST00000469498 CEP170Q5SW79 1584 aa13.79□□□□□ -0.2
GAPVD1-213ENST00000469498 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
GAPVD1-213ENST00000469498 FBLN2P98095 1184 aa13.75□□□□□ -0.21
GAPVD1-213ENST00000469498 CHMP7Q8WUX9 453 aaPredicted RBP13.73□□□□□ -0.21
GAPVD1-213ENST00000469498 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
GAPVD1-213ENST00000469498 IQGAP2Q13576 1575 aa13.71□□□□□ -0.22
GAPVD1-213ENST00000469498 NUP160Q12769 1436 aa13.69□□□□□ -0.22
GAPVD1-213ENST00000469498 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
GAPVD1-213ENST00000469498 LOC105371045A0A1W2PR82 267 aa13.66□□□□□ -0.22
GAPVD1-213ENST00000469498 SHROOM2Q13796 1616 aa13.65□□□□□ -0.22
GAPVD1-213ENST00000469498 UBTFP17480 764 aaKnown RBP13.65□□□□□ -0.22
GAPVD1-213ENST00000469498 KIAA0586Q9BVV6 1533 aa13.64□□□□□ -0.23
GAPVD1-213ENST00000469498 TNIKQ9UKE5 1360 aa13.6□□□□□ -0.23
GAPVD1-213ENST00000469498 SAMD9Q5K651 1589 aa13.6□□□□□ -0.23
GAPVD1-213ENST00000469498 KIAA0556O60303 1618 aa13.59□□□□□ -0.23
GAPVD1-213ENST00000469498 UGGT2Q9NYU1 1516 aa13.59□□□□□ -0.23
GAPVD1-213ENST00000469498 RANGAP1P46060 587 aaPredicted RBP13.57□□□□□ -0.24
GAPVD1-213ENST00000469498 EFCAB5A4FU69 1503 aa13.57□□□□□ -0.24
GAPVD1-213ENST00000469498 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
GAPVD1-213ENST00000469498 ERCC6L2Q5T890 1561 aa13.56□□□□□ -0.24
GAPVD1-213ENST00000469498 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
GAPVD1-213ENST00000469498 CLIP1P30622 1438 aa13.53□□□□□ -0.24
GAPVD1-213ENST00000469498 DISP1Q96F81 1524 aa13.53□□□□□ -0.24
GAPVD1-213ENST00000469498 ARHGAP35Q9NRY4 1499 aa13.52□□□□□ -0.25
GAPVD1-213ENST00000469498 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
GAPVD1-213ENST00000469498 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
GAPVD1-213ENST00000469498 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
GAPVD1-213ENST00000469498 PRG4Q92954 1404 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-213ENST00000469498 MYCNP04198 464 aaPredicted RBP13.5□□□□□ -0.25
GAPVD1-213ENST00000469498 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
GAPVD1-213ENST00000469498 FHOD3Q2V2M9 1422 aa13.48□□□□□ -0.25
GAPVD1-213ENST00000469498 JPH4Q96JJ6 628 aa13.48□□□□□ -0.25
GAPVD1-213ENST00000469498 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
GAPVD1-213ENST00000469498 CARMIL2Q6F5E8 1435 aa13.47□□□□□ -0.25
GAPVD1-213ENST00000469498 POLA2Q14181 598 aa13.46□□□□□ -0.25
GAPVD1-213ENST00000469498 PCF11O94913 1555 aaKnown RBP13.45□□□□□ -0.26
GAPVD1-213ENST00000469498 LRRIQ1Q96JM4 1722 aa13.45□□□□□ -0.26
GAPVD1-213ENST00000469498 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
GAPVD1-213ENST00000469498 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
GAPVD1-213ENST00000469498 RAPGEF6Q8TEU7 1601 aa13.42□□□□□ -0.26
GAPVD1-213ENST00000469498 TTBK1Q5TCY1 1321 aaPredicted RBP13.4□□□□□ -0.26
GAPVD1-213ENST00000469498 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
GAPVD1-213ENST00000469498 HAX1O00165 279 aa13.39□□□□□ -0.27
GAPVD1-213ENST00000469498 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
GAPVD1-213ENST00000469498 ABCA8O94911 1581 aa13.37□□□□□ -0.27
GAPVD1-213ENST00000469498 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
GAPVD1-213ENST00000469498 FMN1Q68DA7 1419 aa13.37□□□□□ -0.27
GAPVD1-213ENST00000469498 VPS8Q8N3P4 1428 aa13.37□□□□□ -0.27
GAPVD1-213ENST00000469498 ADCY10Q96PN6 1610 aa13.36□□□□□ -0.27
GAPVD1-213ENST00000469498 PTPRGP23470 1445 aa13.35□□□□□ -0.27
GAPVD1-213ENST00000469498 PLB1Q6P1J6 1458 aa13.35□□□□□ -0.27
GAPVD1-213ENST00000469498 FYCO1Q9BQS8 1478 aa13.34□□□□□ -0.27
GAPVD1-213ENST00000469498 ABCC2Q92887 1545 aa13.33□□□□□ -0.28
GAPVD1-213ENST00000469498 ZCCHC11Q5TAX3 1644 aaKnown RBP13.32□□□□□ -0.28
GAPVD1-213ENST00000469498 CASKIN1Q8WXD9 1431 aa13.3□□□□□ -0.28
GAPVD1-213ENST00000469498 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
GAPVD1-213ENST00000469498 CDK13Q14004 1512 aaKnown RBP13.29□□□□□ -0.28
GAPVD1-213ENST00000469498 ATXN8OSP0DMR3 200 aa13.29□□□□□ -0.28
GAPVD1-213ENST00000469498 UACAQ9BZF9 1416 aa13.29□□□□□ -0.28
GAPVD1-213ENST00000469498 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
GAPVD1-213ENST00000469498 TIAM1Q13009 1591 aa13.28□□□□□ -0.28
GAPVD1-213ENST00000469498 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
GAPVD1-213ENST00000469498 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms