RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 GRIN2BQ13224 1484 aa21.33■■□□□ 1.01
SMARCD3-205ENST00000469154 PELP1Q8IZL8 1130 aaKnown RBP21.32■■□□□ 1
SMARCD3-205ENST00000469154 PBRM1Q86U86 1689 aa21.31■■□□□ 1
SMARCD3-205ENST00000469154 ACIN1Q9UKV3 1341 aaKnown RBP21.28■■□□□ 1
SMARCD3-205ENST00000469154 CUL7Q14999 1698 aa21.28■■□□□ 1
SMARCD3-205ENST00000469154 SNAPC4Q5SXM2 1469 aa21.24■□□□□ 0.99
SMARCD3-205ENST00000469154 APLP2Q06481 763 aa21.24■□□□□ 0.99
SMARCD3-205ENST00000469154 ZNF316A6NFI3 1004 aaPredicted RBP21.23■□□□□ 0.99
SMARCD3-205ENST00000469154 FHAD1B1AJZ9 1412 aa21.22■□□□□ 0.99
SMARCD3-205ENST00000469154 CENPBP07199 599 aaPredicted RBP21.21■□□□□ 0.99
SMARCD3-205ENST00000469154 ADAMTS12P58397 1594 aa21.2■□□□□ 0.98
SMARCD3-205ENST00000469154 HNRNPUL2Q1KMD3 747 aaKnown RBP21.18■□□□□ 0.98
SMARCD3-205ENST00000469154 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
SMARCD3-205ENST00000469154 NEUROD1Q13562 356 aa21.17■□□□□ 0.98
SMARCD3-205ENST00000469154 RANGAP1P46060 587 aaPredicted RBP21.17■□□□□ 0.98
SMARCD3-205ENST00000469154 FBLN2P98095 1184 aa21.16■□□□□ 0.98
SMARCD3-205ENST00000469154 CHMP7Q8WUX9 453 aaPredicted RBP21.14■□□□□ 0.97
SMARCD3-205ENST00000469154 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
SMARCD3-205ENST00000469154 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
SMARCD3-205ENST00000469154 GRIN2AQ12879 1464 aa21.07■□□□□ 0.96
SMARCD3-205ENST00000469154 CLSPNQ9HAW4 1339 aa21■□□□□ 0.95
SMARCD3-205ENST00000469154 CTTNBP2Q8WZ74 1663 aa20.99■□□□□ 0.95
SMARCD3-205ENST00000469154 GTF3C3Q9Y5Q9 886 aa20.98■□□□□ 0.95
SMARCD3-205ENST00000469154 RRBP1Q9P2E9 1410 aaKnown RBP20.94■□□□□ 0.94
SMARCD3-205ENST00000469154 CEP170Q5SW79 1584 aa20.94■□□□□ 0.94
SMARCD3-205ENST00000469154 CHD1O14646 1710 aa20.94■□□□□ 0.94
SMARCD3-205ENST00000469154 NUP160Q12769 1436 aa20.92■□□□□ 0.94
SMARCD3-205ENST00000469154 KIAA0586Q9BVV6 1533 aa20.92■□□□□ 0.94
SMARCD3-205ENST00000469154 ARHGAP35Q9NRY4 1499 aa20.91■□□□□ 0.94
SMARCD3-205ENST00000469154 IQGAP2Q13576 1575 aa20.91■□□□□ 0.94
SMARCD3-205ENST00000469154 DHX57Q6P158 1386 aaKnown RBP20.91■□□□□ 0.94
SMARCD3-205ENST00000469154 P3H3Q8IVL6 736 aa20.9■□□□□ 0.94
SMARCD3-205ENST00000469154 KANK4Q5T7N3 995 aaPredicted RBP20.87■□□□□ 0.93
SMARCD3-205ENST00000469154 MIER1Q8N108 512 aa20.85■□□□□ 0.93
SMARCD3-205ENST00000469154 MAP3K1Q13233 1512 aa20.82■□□□□ 0.92
SMARCD3-205ENST00000469154 JPH4Q96JJ6 628 aa20.82■□□□□ 0.92
SMARCD3-205ENST00000469154 FHOD3Q2V2M9 1422 aa20.81■□□□□ 0.92
SMARCD3-205ENST00000469154 EFCAB5A4FU69 1503 aa20.81■□□□□ 0.92
SMARCD3-205ENST00000469154 CCNB3Q8WWL7 1395 aa20.8■□□□□ 0.92
SMARCD3-205ENST00000469154 UGGT2Q9NYU1 1516 aa20.79■□□□□ 0.92
SMARCD3-205ENST00000469154 TIAM1Q13009 1591 aa20.78■□□□□ 0.92
SMARCD3-205ENST00000469154 SAMD9Q5K651 1589 aa20.77■□□□□ 0.92
SMARCD3-205ENST00000469154 YTHDC1Q96MU7 727 aaKnown RBP20.77■□□□□ 0.92
SMARCD3-205ENST00000469154 DISP1Q96F81 1524 aa20.74■□□□□ 0.91
SMARCD3-205ENST00000469154 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
SMARCD3-205ENST00000469154 CFAP43Q8NDM7 1665 aa20.71■□□□□ 0.91
SMARCD3-205ENST00000469154 CLASP1Q7Z460 1538 aa20.7■□□□□ 0.9
SMARCD3-205ENST00000469154 KIAA0556O60303 1618 aa20.69■□□□□ 0.9
SMARCD3-205ENST00000469154 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
SMARCD3-205ENST00000469154 CARMIL2Q6F5E8 1435 aa20.68■□□□□ 0.9
SMARCD3-205ENST00000469154 FMN1Q68DA7 1419 aa20.66■□□□□ 0.9
SMARCD3-205ENST00000469154 ATP1B4Q9UN42 357 aaPredicted RBP20.66■□□□□ 0.9
SMARCD3-205ENST00000469154 LRRC9Q6ZRR7 1453 aa20.65■□□□□ 0.9
SMARCD3-205ENST00000469154 SHROOM2Q13796 1616 aa20.63■□□□□ 0.89
SMARCD3-205ENST00000469154 PCF11O94913 1555 aaKnown RBP20.61■□□□□ 0.89
SMARCD3-205ENST00000469154 RAB3GAP2Q9H2M9 1393 aa20.59■□□□□ 0.89
SMARCD3-205ENST00000469154 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
SMARCD3-205ENST00000469154 MAPKBP1O60336 1514 aa20.58■□□□□ 0.88
SMARCD3-205ENST00000469154 CASKIN1Q8WXD9 1431 aa20.58■□□□□ 0.88
SMARCD3-205ENST00000469154 SETD5Q9C0A6 1442 aa20.55■□□□□ 0.88
SMARCD3-205ENST00000469154 FYCO1Q9BQS8 1478 aa20.55■□□□□ 0.88
SMARCD3-205ENST00000469154 ITGAEP38570 1179 aa20.54■□□□□ 0.88
SMARCD3-205ENST00000469154 PTPRGP23470 1445 aa20.53■□□□□ 0.88
SMARCD3-205ENST00000469154 PHLDB1Q86UU1 1377 aa20.53■□□□□ 0.88
SMARCD3-205ENST00000469154 ARID3CA6NKF2 412 aa20.51■□□□□ 0.87
SMARCD3-205ENST00000469154 PLB1Q6P1J6 1458 aa20.51■□□□□ 0.87
SMARCD3-205ENST00000469154 RAPGEF6Q8TEU7 1601 aa20.45■□□□□ 0.86
SMARCD3-205ENST00000469154 HECW1Q76N89 1606 aa20.45■□□□□ 0.86
SMARCD3-205ENST00000469154 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.44■□□□□ 0.86
SMARCD3-205ENST00000469154 NUP153P49790 1475 aaKnown RBP20.43■□□□□ 0.86
SMARCD3-205ENST00000469154 EPRSP07814 1512 aaKnown RBP20.41■□□□□ 0.86
SMARCD3-205ENST00000469154 LRRIQ1Q96JM4 1722 aa20.41■□□□□ 0.86
SMARCD3-205ENST00000469154 ABCA8O94911 1581 aa20.41■□□□□ 0.86
SMARCD3-205ENST00000469154 CDK13Q14004 1512 aaKnown RBP20.4■□□□□ 0.86
SMARCD3-205ENST00000469154 FAM50AQ14320 339 aaKnown RBP20.4■□□□□ 0.86
SMARCD3-205ENST00000469154 UACAQ9BZF9 1416 aa20.39■□□□□ 0.85
SMARCD3-205ENST00000469154 CCDC18Q5T9S5 1454 aa20.38■□□□□ 0.85
SMARCD3-205ENST00000469154 TIMELESSQ9UNS1 1208 aa20.36■□□□□ 0.85
SMARCD3-205ENST00000469154 MTUS2Q5JR59 1369 aa20.34■□□□□ 0.85
SMARCD3-205ENST00000469154 ARHGEF11O15085 1522 aa20.34■□□□□ 0.85
SMARCD3-205ENST00000469154 ATP10BO94823 1461 aa20.31■□□□□ 0.84
SMARCD3-205ENST00000469154 ABCC2Q92887 1545 aa20.31■□□□□ 0.84
SMARCD3-205ENST00000469154 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
SMARCD3-205ENST00000469154 MAGI3Q5TCQ9 1506 aa20.3■□□□□ 0.84
SMARCD3-205ENST00000469154 MYT1Q01538 1121 aa20.29■□□□□ 0.84
SMARCD3-205ENST00000469154 CDK11AQ9UQ88 783 aaPredicted RBP20.29■□□□□ 0.84
SMARCD3-205ENST00000469154 UHRF1BP1LA0JNW5 1464 aa20.26■□□□□ 0.83
SMARCD3-205ENST00000469154 SIN3AQ96ST3 1273 aa20.26■□□□□ 0.83
SMARCD3-205ENST00000469154 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
SMARCD3-205ENST00000469154 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
SMARCD3-205ENST00000469154 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
SMARCD3-205ENST00000469154 EHBP1L1Q8N3D4 1523 aa20.24■□□□□ 0.83
SMARCD3-205ENST00000469154 SUPT6HQ7KZ85 1726 aaKnown RBP20.24■□□□□ 0.83
SMARCD3-205ENST00000469154 CYB5RLQ6IPT4 315 aa20.24■□□□□ 0.83
SMARCD3-205ENST00000469154 SUPT16HQ9Y5B9 1047 aaKnown RBP20.24■□□□□ 0.83
SMARCD3-205ENST00000469154 PLEKHD1A6NEE1 506 aa20.23■□□□□ 0.83
SMARCD3-205ENST00000469154 ADCY10Q96PN6 1610 aa20.23■□□□□ 0.83
SMARCD3-205ENST00000469154 PTPN23Q9H3S7 1636 aa20.22■□□□□ 0.83
SMARCD3-205ENST00000469154 HFM1A2PYH4 1435 aa20.2■□□□□ 0.83
SMARCD3-205ENST00000469154 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms