RNA–Protein interactions for RNA: ENST00000468598.5

SFPQ-205, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 2,835 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-205ENST00000468598 GTF3C3Q9Y5Q9 886 aa10.71□□□□□ -0.69
SFPQ-205ENST00000468598 EEA1Q15075 1411 aa10.71□□□□□ -0.7
SFPQ-205ENST00000468598 RAPGEF2Q9Y4G8 1499 aa10.7□□□□□ -0.7
SFPQ-205ENST00000468598 UBTFP17480 764 aaKnown RBP10.69□□□□□ -0.7
SFPQ-205ENST00000468598 ERICH3Q5RHP9 1530 aa10.69□□□□□ -0.7
SFPQ-205ENST00000468598 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
SFPQ-205ENST00000468598 PRXQ9BXM0 1461 aa10.68□□□□□ -0.7
SFPQ-205ENST00000468598 FHAD1B1AJZ9 1412 aa10.64□□□□□ -0.71
SFPQ-205ENST00000468598 ADAMTS12P58397 1594 aa10.64□□□□□ -0.71
SFPQ-205ENST00000468598 MAGI1Q96QZ7 1491 aaPredicted RBP10.64□□□□□ -0.71
SFPQ-205ENST00000468598 TNIKQ9UKE5 1360 aa10.63□□□□□ -0.71
SFPQ-205ENST00000468598 ZNF316A6NFI3 1004 aaPredicted RBP10.63□□□□□ -0.71
SFPQ-205ENST00000468598 CUL7Q14999 1698 aa10.62□□□□□ -0.71
SFPQ-205ENST00000468598 SENP3Q9H4L4 574 aaPredicted RBP10.62□□□□□ -0.71
SFPQ-205ENST00000468598 SYNJ2O15056 1496 aa10.62□□□□□ -0.71
SFPQ-205ENST00000468598 GOLGA3Q08378 1498 aa10.62□□□□□ -0.71
SFPQ-205ENST00000468598 KIF21BO75037 1637 aa10.61□□□□□ -0.71
SFPQ-205ENST00000468598 CEP162Q5TB80 1403 aa10.61□□□□□ -0.71
SFPQ-205ENST00000468598 GRIN2AQ12879 1464 aa10.6□□□□□ -0.71
SFPQ-205ENST00000468598 CHD1O14646 1710 aa10.6□□□□□ -0.71
SFPQ-205ENST00000468598 P3H3Q8IVL6 736 aa10.57□□□□□ -0.72
SFPQ-205ENST00000468598 CEP170Q5SW79 1584 aa10.56□□□□□ -0.72
SFPQ-205ENST00000468598 TTBK1Q5TCY1 1321 aaPredicted RBP10.55□□□□□ -0.72
SFPQ-205ENST00000468598 OSCARQ8IYS5 282 aa10.53□□□□□ -0.72
SFPQ-205ENST00000468598 CLSPNQ9HAW4 1339 aa10.52□□□□□ -0.73
SFPQ-205ENST00000468598 NUP160Q12769 1436 aa10.52□□□□□ -0.73
SFPQ-205ENST00000468598 JPH4Q96JJ6 628 aa10.51□□□□□ -0.73
SFPQ-205ENST00000468598 CTTNBP2Q8WZ74 1663 aa10.5□□□□□ -0.73
SFPQ-205ENST00000468598 KIAA0586Q9BVV6 1533 aa10.49□□□□□ -0.73
SFPQ-205ENST00000468598 IQGAP2Q13576 1575 aa10.48□□□□□ -0.73
SFPQ-205ENST00000468598 CLIP1P30622 1438 aa10.48□□□□□ -0.73
SFPQ-205ENST00000468598 ERCC6L2Q5T890 1561 aa10.45□□□□□ -0.74
SFPQ-205ENST00000468598 ARHGAP35Q9NRY4 1499 aa10.45□□□□□ -0.74
SFPQ-205ENST00000468598 MIER1Q8N108 512 aa10.44□□□□□ -0.74
SFPQ-205ENST00000468598 FHOD3Q2V2M9 1422 aa10.44□□□□□ -0.74
SFPQ-205ENST00000468598 PRG4Q92954 1404 aaPredicted RBP10.44□□□□□ -0.74
SFPQ-205ENST00000468598 CLASP1Q7Z460 1538 aa10.44□□□□□ -0.74
SFPQ-205ENST00000468598 ARAP1Q96P48 1450 aa10.43□□□□□ -0.74
SFPQ-205ENST00000468598 DISP1Q96F81 1524 aa10.42□□□□□ -0.74
SFPQ-205ENST00000468598 ARID3CA6NKF2 412 aa10.42□□□□□ -0.74
SFPQ-205ENST00000468598 ATP1B4Q9UN42 357 aaPredicted RBP10.41□□□□□ -0.74
SFPQ-205ENST00000468598 UGGT2Q9NYU1 1516 aa10.4□□□□□ -0.74
SFPQ-205ENST00000468598 YTHDC1Q96MU7 727 aaKnown RBP10.4□□□□□ -0.74
SFPQ-205ENST00000468598 VPS8Q8N3P4 1428 aa10.38□□□□□ -0.75
SFPQ-205ENST00000468598 SAMD9Q5K651 1589 aa10.38□□□□□ -0.75
SFPQ-205ENST00000468598 SHROOM2Q13796 1616 aa10.38□□□□□ -0.75
SFPQ-205ENST00000468598 KIAA0556O60303 1618 aa10.38□□□□□ -0.75
SFPQ-205ENST00000468598 CARMIL2Q6F5E8 1435 aa10.37□□□□□ -0.75
SFPQ-205ENST00000468598 EFCAB5A4FU69 1503 aa10.35□□□□□ -0.75
SFPQ-205ENST00000468598 CYB5RLQ6IPT4 315 aa10.34□□□□□ -0.75
SFPQ-205ENST00000468598 PLB1Q6P1J6 1458 aa10.34□□□□□ -0.75
SFPQ-205ENST00000468598 PTPRGP23470 1445 aa10.34□□□□□ -0.75
SFPQ-205ENST00000468598 ARHGEF11O15085 1522 aa10.34□□□□□ -0.75
SFPQ-205ENST00000468598 HNRNPUL2Q1KMD3 747 aaKnown RBP10.33□□□□□ -0.76
SFPQ-205ENST00000468598 APLP2Q06481 763 aa10.32□□□□□ -0.76
SFPQ-205ENST00000468598 RIMBP3CA6NJZ7 1639 aa10.3□□□□□ -0.76
SFPQ-205ENST00000468598 RIMBP3BA6NNM3 1639 aa10.3□□□□□ -0.76
SFPQ-205ENST00000468598 RIMBP3Q9UFD9 1639 aa10.3□□□□□ -0.76
SFPQ-205ENST00000468598 PCF11O94913 1555 aaKnown RBP10.3□□□□□ -0.76
SFPQ-205ENST00000468598 FMN1Q68DA7 1419 aa10.29□□□□□ -0.76
SFPQ-205ENST00000468598 DNAJC5Q9H3Z4 198 aa10.28□□□□□ -0.76
SFPQ-205ENST00000468598 SUPT16HQ9Y5B9 1047 aaKnown RBP10.28□□□□□ -0.76
SFPQ-205ENST00000468598 KANK4Q5T7N3 995 aaPredicted RBP10.27□□□□□ -0.77
SFPQ-205ENST00000468598 DHX57Q6P158 1386 aaKnown RBP10.27□□□□□ -0.77
SFPQ-205ENST00000468598 CASKIN1Q8WXD9 1431 aa10.26□□□□□ -0.77
SFPQ-205ENST00000468598 UACAQ9BZF9 1416 aa10.25□□□□□ -0.77
SFPQ-205ENST00000468598 NUP153P49790 1475 aaKnown RBP10.25□□□□□ -0.77
SFPQ-205ENST00000468598 CDK13Q14004 1512 aaKnown RBP10.25□□□□□ -0.77
SFPQ-205ENST00000468598 LRRIQ1Q96JM4 1722 aa10.25□□□□□ -0.77
SFPQ-205ENST00000468598 RAPGEF6Q8TEU7 1601 aa10.24□□□□□ -0.77
SFPQ-205ENST00000468598 ABCA8O94911 1581 aa10.24□□□□□ -0.77
SFPQ-205ENST00000468598 FYCO1Q9BQS8 1478 aa10.23□□□□□ -0.77
SFPQ-205ENST00000468598 ADCY10Q96PN6 1610 aa10.22□□□□□ -0.77
SFPQ-205ENST00000468598 EPRSP07814 1512 aaKnown RBP10.22□□□□□ -0.77
SFPQ-205ENST00000468598 ATP10BO94823 1461 aa10.21□□□□□ -0.77
SFPQ-205ENST00000468598 RRBP1Q9P2E9 1410 aaKnown RBP10.2□□□□□ -0.78
SFPQ-205ENST00000468598 ABCC2Q92887 1545 aa10.2□□□□□ -0.78
SFPQ-205ENST00000468598 KCNH8Q96L42 1107 aa10.2□□□□□ -0.78
SFPQ-205ENST00000468598 HECW1Q76N89 1606 aa10.2□□□□□ -0.78
SFPQ-205ENST00000468598 ANP32EQ9BTT0 268 aa10.19□□□□□ -0.78
SFPQ-205ENST00000468598 TSHZ2Q9NRE2 1034 aa10.19□□□□□ -0.78
SFPQ-205ENST00000468598 MAGI3Q5TCQ9 1506 aa10.18□□□□□ -0.78
SFPQ-205ENST00000468598 TIAM1Q13009 1591 aa10.18□□□□□ -0.78
SFPQ-205ENST00000468598 NPM1P06748 294 aaKnown RBP eCLIP10.17□□□□□ -0.78
SFPQ-205ENST00000468598 MTUS2Q5JR59 1369 aa10.16□□□□□ -0.78
SFPQ-205ENST00000468598 ZCCHC11Q5TAX3 1644 aaKnown RBP10.16□□□□□ -0.78
SFPQ-205ENST00000468598 PLEKHD1A6NEE1 506 aa10.16□□□□□ -0.78
SFPQ-205ENST00000468598 UHRF1BP1LA0JNW5 1464 aa10.16□□□□□ -0.78
SFPQ-205ENST00000468598 LRRC9Q6ZRR7 1453 aa10.15□□□□□ -0.78
SFPQ-205ENST00000468598 KDM5BQ9UGL1 1544 aa10.15□□□□□ -0.78
SFPQ-205ENST00000468598 CCDC18Q5T9S5 1454 aa10.14□□□□□ -0.79
SFPQ-205ENST00000468598 CFAP43Q8NDM7 1665 aa10.13□□□□□ -0.79
SFPQ-205ENST00000468598 CDK11AQ9UQ88 783 aaPredicted RBP10.13□□□□□ -0.79
SFPQ-205ENST00000468598 ASXL2Q76L83 1435 aa10.12□□□□□ -0.79
SFPQ-205ENST00000468598 KIF14Q15058 1648 aa10.11□□□□□ -0.79
SFPQ-205ENST00000468598 CCNB3Q8WWL7 1395 aa10.11□□□□□ -0.79
SFPQ-205ENST00000468598 MAP3K1Q13233 1512 aa10.1□□□□□ -0.79
SFPQ-205ENST00000468598 TROQ12816 1431 aaPredicted RBP10.1□□□□□ -0.79
SFPQ-205ENST00000468598 PHLDB1Q86UU1 1377 aa10.1□□□□□ -0.79
SFPQ-205ENST00000468598 NCOA2Q15596 1464 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms