RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
SND1-206ENST00000468166 RANGAP1P46060 587 aaPredicted RBP12.64□□□□□ -0.39
SND1-206ENST00000468166 GRIN2AQ12879 1464 aa12.63□□□□□ -0.39
SND1-206ENST00000468166 EFCAB5A4FU69 1503 aa12.62□□□□□ -0.39
SND1-206ENST00000468166 IQGAP2Q13576 1575 aa12.6□□□□□ -0.39
SND1-206ENST00000468166 ARAP1Q96P48 1450 aa12.6□□□□□ -0.39
SND1-206ENST00000468166 ARHGAP35Q9NRY4 1499 aa12.6□□□□□ -0.39
SND1-206ENST00000468166 CHD1O14646 1710 aa12.59□□□□□ -0.39
SND1-206ENST00000468166 VPS8Q8N3P4 1428 aa12.59□□□□□ -0.39
SND1-206ENST00000468166 PLPPR3Q6T4P5 718 aa12.58□□□□□ -0.4
SND1-206ENST00000468166 SAMD9Q5K651 1589 aa12.57□□□□□ -0.4
SND1-206ENST00000468166 CEP170Q5SW79 1584 aa12.57□□□□□ -0.4
SND1-206ENST00000468166 CHMP7Q8WUX9 453 aaPredicted RBP12.57□□□□□ -0.4
SND1-206ENST00000468166 KIAA0586Q9BVV6 1533 aa12.54□□□□□ -0.4
SND1-206ENST00000468166 FBLN2P98095 1184 aa12.54□□□□□ -0.4
SND1-206ENST00000468166 NUP160Q12769 1436 aa12.53□□□□□ -0.4
SND1-206ENST00000468166 UGGT2Q9NYU1 1516 aa12.52□□□□□ -0.41
SND1-206ENST00000468166 FHOD3Q2V2M9 1422 aa12.5□□□□□ -0.41
SND1-206ENST00000468166 PCF11O94913 1555 aaKnown RBP12.48□□□□□ -0.41
SND1-206ENST00000468166 KIAA0556O60303 1618 aa12.48□□□□□ -0.41
SND1-206ENST00000468166 P3H3Q8IVL6 736 aa12.47□□□□□ -0.41
SND1-206ENST00000468166 FMN1Q68DA7 1419 aa12.46□□□□□ -0.41
SND1-206ENST00000468166 APLP2Q06481 763 aa12.45□□□□□ -0.42
SND1-206ENST00000468166 FYCO1Q9BQS8 1478 aa12.45□□□□□ -0.42
SND1-206ENST00000468166 CFAP43Q8NDM7 1665 aa12.44□□□□□ -0.42
SND1-206ENST00000468166 DISP1Q96F81 1524 aa12.43□□□□□ -0.42
SND1-206ENST00000468166 PPARGC1BQ86YN6 1023 aaKnown RBP12.42□□□□□ -0.42
SND1-206ENST00000468166 CASKIN1Q8WXD9 1431 aa12.42□□□□□ -0.42
SND1-206ENST00000468166 SHROOM2Q13796 1616 aa12.41□□□□□ -0.42
SND1-206ENST00000468166 TIAM1Q13009 1591 aa12.41□□□□□ -0.42
SND1-206ENST00000468166 CARMIL2Q6F5E8 1435 aa12.4□□□□□ -0.42
SND1-206ENST00000468166 MAP3K1Q13233 1512 aa12.4□□□□□ -0.42
SND1-206ENST00000468166 CLASP1Q7Z460 1538 aa12.4□□□□□ -0.42
SND1-206ENST00000468166 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
SND1-206ENST00000468166 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
SND1-206ENST00000468166 LRRIQ1Q96JM4 1722 aa12.39□□□□□ -0.43
SND1-206ENST00000468166 JPH4Q96JJ6 628 aa12.37□□□□□ -0.43
SND1-206ENST00000468166 TTBK1Q5TCY1 1321 aaPredicted RBP12.37□□□□□ -0.43
SND1-206ENST00000468166 RAPGEF6Q8TEU7 1601 aa12.36□□□□□ -0.43
SND1-206ENST00000468166 PRG4Q92954 1404 aaPredicted RBP12.35□□□□□ -0.43
SND1-206ENST00000468166 PCGF6Q9BYE7 350 aa12.34□□□□□ -0.43
SND1-206ENST00000468166 ATP1B4Q9UN42 357 aaPredicted RBP12.34□□□□□ -0.43
SND1-206ENST00000468166 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
SND1-206ENST00000468166 LRRC9Q6ZRR7 1453 aa12.32□□□□□ -0.44
SND1-206ENST00000468166 EPRSP07814 1512 aaKnown RBP12.29□□□□□ -0.44
SND1-206ENST00000468166 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
SND1-206ENST00000468166 ERCC6L2Q5T890 1561 aa12.29□□□□□ -0.44
SND1-206ENST00000468166 ABCA8O94911 1581 aa12.28□□□□□ -0.44
SND1-206ENST00000468166 NUP153P49790 1475 aaKnown RBP12.27□□□□□ -0.44
SND1-206ENST00000468166 PLB1Q6P1J6 1458 aa12.27□□□□□ -0.44
SND1-206ENST00000468166 EHBP1L1Q8N3D4 1523 aa12.27□□□□□ -0.44
SND1-206ENST00000468166 CDK13Q14004 1512 aaKnown RBP12.27□□□□□ -0.45
SND1-206ENST00000468166 PTPRGP23470 1445 aa12.26□□□□□ -0.45
SND1-206ENST00000468166 SUPT6HQ7KZ85 1726 aaKnown RBP12.25□□□□□ -0.45
SND1-206ENST00000468166 MTUS2Q5JR59 1369 aa12.24□□□□□ -0.45
SND1-206ENST00000468166 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
SND1-206ENST00000468166 MAGI3Q5TCQ9 1506 aa12.22□□□□□ -0.45
SND1-206ENST00000468166 ARID3CA6NKF2 412 aa12.2□□□□□ -0.46
SND1-206ENST00000468166 ABCC2Q92887 1545 aa12.2□□□□□ -0.46
SND1-206ENST00000468166 UACAQ9BZF9 1416 aa12.2□□□□□ -0.46
SND1-206ENST00000468166 RRBP1Q9P2E9 1410 aaKnown RBP12.19□□□□□ -0.46
SND1-206ENST00000468166 NCOA2Q15596 1464 aa12.18□□□□□ -0.46
SND1-206ENST00000468166 ADCY10Q96PN6 1610 aa12.18□□□□□ -0.46
SND1-206ENST00000468166 PHLDB1Q86UU1 1377 aa12.18□□□□□ -0.46
SND1-206ENST00000468166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
SND1-206ENST00000468166 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
SND1-206ENST00000468166 ARHGEF11O15085 1522 aa12.16□□□□□ -0.46
SND1-206ENST00000468166 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
SND1-206ENST00000468166 CCNB3Q8WWL7 1395 aa12.16□□□□□ -0.46
SND1-206ENST00000468166 UHRF1BP1LA0JNW5 1464 aa12.15□□□□□ -0.46
SND1-206ENST00000468166 ATP10BO94823 1461 aa12.15□□□□□ -0.46
SND1-206ENST00000468166 TROQ12816 1431 aaPredicted RBP12.14□□□□□ -0.47
SND1-206ENST00000468166 KIF14Q15058 1648 aa12.14□□□□□ -0.47
SND1-206ENST00000468166 ZCCHC11Q5TAX3 1644 aaKnown RBP12.14□□□□□ -0.47
SND1-206ENST00000468166 MYOM3Q5VTT5 1437 aa12.13□□□□□ -0.47
SND1-206ENST00000468166 ITSN2Q9NZM3 1697 aa12.13□□□□□ -0.47
SND1-206ENST00000468166 FGD6Q6ZV73 1430 aa12.11□□□□□ -0.47
SND1-206ENST00000468166 PTPN23Q9H3S7 1636 aa12.1□□□□□ -0.47
SND1-206ENST00000468166 KDM5BQ9UGL1 1544 aa12.1□□□□□ -0.47
SND1-206ENST00000468166 PLEKHD1A6NEE1 506 aa12.08□□□□□ -0.48
SND1-206ENST00000468166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.07□□□□□ -0.48
SND1-206ENST00000468166 CDC42BPAQ5VT25 1732 aa12.07□□□□□ -0.48
SND1-206ENST00000468166 RIMBP3CA6NJZ7 1639 aa12.07□□□□□ -0.48
SND1-206ENST00000468166 RIMBP3BA6NNM3 1639 aa12.07□□□□□ -0.48
SND1-206ENST00000468166 RIMBP3Q9UFD9 1639 aa12.07□□□□□ -0.48
SND1-206ENST00000468166 MIA2Q96PC5 1412 aa12.06□□□□□ -0.48
SND1-206ENST00000468166 FAM50AQ14320 339 aaKnown RBP12.06□□□□□ -0.48
SND1-206ENST00000468166 TCOF1Q13428 1488 aaKnown RBP12.05□□□□□ -0.48
SND1-206ENST00000468166 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
SND1-206ENST00000468166 PREX2Q70Z35 1606 aa12.04□□□□□ -0.48
SND1-206ENST00000468166 MYO5CQ9NQX4 1742 aa12.03□□□□□ -0.48
SND1-206ENST00000468166 TTC37Q6PGP7 1564 aa12.03□□□□□ -0.48
SND1-206ENST00000468166 GPATCH8Q9UKJ3 1502 aaKnown RBP12.02□□□□□ -0.48
SND1-206ENST00000468166 ITGAEP38570 1179 aa12.02□□□□□ -0.49
SND1-206ENST00000468166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.01□□□□□ -0.49
SND1-206ENST00000468166 CAMSAP2Q08AD1 1489 aa12□□□□□ -0.49
SND1-206ENST00000468166 WDR7Q9Y4E6 1490 aa12□□□□□ -0.49
SND1-206ENST00000468166 CDC42BPBQ9Y5S2 1711 aa12□□□□□ -0.49
SND1-206ENST00000468166 DNMT1P26358 1616 aaKnown RBP11.99□□□□□ -0.49
SND1-206ENST00000468166 CROCC2H7BZ55 1655 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms