RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CTTNBP2Q8WZ74 1663 aa24.84■■□□□ 1.57
SNIP1-202ENST00000468040 IQGAP2Q13576 1575 aa24.8■■□□□ 1.56
SNIP1-202ENST00000468040 UBTFP17480 764 aaKnown RBP24.79■■□□□ 1.56
SNIP1-202ENST00000468040 EHMT2Q96KQ7 1210 aa24.79■■□□□ 1.56
SNIP1-202ENST00000468040 SHROOM2Q13796 1616 aa24.74■■□□□ 1.55
SNIP1-202ENST00000468040 JPH4Q96JJ6 628 aa24.72■■□□□ 1.55
SNIP1-202ENST00000468040 UGGT2Q9NYU1 1516 aa24.68■■□□□ 1.54
SNIP1-202ENST00000468040 TNIKQ9UKE5 1360 aa24.67■■□□□ 1.54
SNIP1-202ENST00000468040 PRG4Q92954 1404 aaPredicted RBP24.64■■□□□ 1.54
SNIP1-202ENST00000468040 LOC105371045A0A1W2PR82 267 aa24.64■■□□□ 1.54
SNIP1-202ENST00000468040 DNAJC5Q9H3Z4 198 aa24.63■■□□□ 1.53
SNIP1-202ENST00000468040 CARMIL2Q6F5E8 1435 aa24.61■■□□□ 1.53
SNIP1-202ENST00000468040 ARHGEF11O15085 1522 aa24.6■■□□□ 1.53
SNIP1-202ENST00000468040 DISP1Q96F81 1524 aa24.56■■□□□ 1.52
SNIP1-202ENST00000468040 EFCAB5A4FU69 1503 aa24.56■■□□□ 1.52
SNIP1-202ENST00000468040 ERCC6L2Q5T890 1561 aa24.55■■□□□ 1.52
SNIP1-202ENST00000468040 KIAA0556O60303 1618 aa24.55■■□□□ 1.52
SNIP1-202ENST00000468040 SAMD9Q5K651 1589 aa24.54■■□□□ 1.52
SNIP1-202ENST00000468040 RIMBP3CA6NJZ7 1639 aa24.54■■□□□ 1.52
SNIP1-202ENST00000468040 RIMBP3BA6NNM3 1639 aa24.54■■□□□ 1.52
SNIP1-202ENST00000468040 RIMBP3Q9UFD9 1639 aa24.54■■□□□ 1.52
SNIP1-202ENST00000468040 RANGAP1P46060 587 aaPredicted RBP24.54■■□□□ 1.52
SNIP1-202ENST00000468040 CLIP1P30622 1438 aa24.47■■□□□ 1.51
SNIP1-202ENST00000468040 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
SNIP1-202ENST00000468040 ARHGAP35Q9NRY4 1499 aa24.45■■□□□ 1.5
SNIP1-202ENST00000468040 ARAP1Q96P48 1450 aa24.43■■□□□ 1.5
SNIP1-202ENST00000468040 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
SNIP1-202ENST00000468040 PTPRGP23470 1445 aa24.41■■□□□ 1.5
SNIP1-202ENST00000468040 FHOD3Q2V2M9 1422 aa24.39■■□□□ 1.5
SNIP1-202ENST00000468040 TTBK1Q5TCY1 1321 aaPredicted RBP24.34■■□□□ 1.49
SNIP1-202ENST00000468040 CYB5RLQ6IPT4 315 aa24.33■■□□□ 1.49
SNIP1-202ENST00000468040 FMN1Q68DA7 1419 aa24.31■■□□□ 1.48
SNIP1-202ENST00000468040 UACAQ9BZF9 1416 aa24.27■■□□□ 1.48
SNIP1-202ENST00000468040 PLB1Q6P1J6 1458 aa24.25■■□□□ 1.47
SNIP1-202ENST00000468040 ABCA8O94911 1581 aa24.25■■□□□ 1.47
SNIP1-202ENST00000468040 UHRF1BP1LA0JNW5 1464 aa24.24■■□□□ 1.47
SNIP1-202ENST00000468040 ABCC2Q92887 1545 aa24.23■■□□□ 1.47
SNIP1-202ENST00000468040 RAPGEF6Q8TEU7 1601 aa24.21■■□□□ 1.47
SNIP1-202ENST00000468040 ADCY10Q96PN6 1610 aa24.21■■□□□ 1.47
SNIP1-202ENST00000468040 VPS8Q8N3P4 1428 aa24.16■■□□□ 1.46
SNIP1-202ENST00000468040 CASKIN1Q8WXD9 1431 aa24.15■■□□□ 1.46
SNIP1-202ENST00000468040 PCF11O94913 1555 aaKnown RBP24.15■■□□□ 1.46
SNIP1-202ENST00000468040 HECW1Q76N89 1606 aa24.13■■□□□ 1.45
SNIP1-202ENST00000468040 FYCO1Q9BQS8 1478 aa24.13■■□□□ 1.45
SNIP1-202ENST00000468040 NUP153P49790 1475 aaKnown RBP24.12■■□□□ 1.45
SNIP1-202ENST00000468040 KDM5BQ9UGL1 1544 aa24.1■■□□□ 1.45
SNIP1-202ENST00000468040 NPM1P06748 294 aaKnown RBP eCLIP24.1■■□□□ 1.45
SNIP1-202ENST00000468040 ATP1B4Q9UN42 357 aaPredicted RBP24.08■■□□□ 1.45
SNIP1-202ENST00000468040 ZCCHC11Q5TAX3 1644 aaKnown RBP24.06■■□□□ 1.44
SNIP1-202ENST00000468040 ATP10BO94823 1461 aa24.04■■□□□ 1.44
SNIP1-202ENST00000468040 CCDC18Q5T9S5 1454 aa24.04■■□□□ 1.44
SNIP1-202ENST00000468040 EPRSP07814 1512 aaKnown RBP24.04■■□□□ 1.44
SNIP1-202ENST00000468040 ARID3CA6NKF2 412 aa24.01■■□□□ 1.43
SNIP1-202ENST00000468040 MAPKBP1O60336 1514 aa24■■□□□ 1.43
SNIP1-202ENST00000468040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
SNIP1-202ENST00000468040 HNRNPUL2Q1KMD3 747 aaKnown RBP23.98■■□□□ 1.43
SNIP1-202ENST00000468040 CDK13Q14004 1512 aaKnown RBP23.98■■□□□ 1.43
SNIP1-202ENST00000468040 LRRIQ1Q96JM4 1722 aa23.98■■□□□ 1.43
SNIP1-202ENST00000468040 ASXL2Q76L83 1435 aa23.93■■□□□ 1.42
SNIP1-202ENST00000468040 CDK11AQ9UQ88 783 aaPredicted RBP23.93■■□□□ 1.42
SNIP1-202ENST00000468040 MAP3K1Q13233 1512 aa23.91■■□□□ 1.42
SNIP1-202ENST00000468040 WDR7Q9Y4E6 1490 aa23.91■■□□□ 1.42
SNIP1-202ENST00000468040 CFAP43Q8NDM7 1665 aa23.9■■□□□ 1.42
SNIP1-202ENST00000468040 APLP2Q06481 763 aa23.9■■□□□ 1.42
SNIP1-202ENST00000468040 PLEKHD1A6NEE1 506 aa23.89■■□□□ 1.41
SNIP1-202ENST00000468040 TIAM1Q13009 1591 aa23.89■■□□□ 1.41
SNIP1-202ENST00000468040 TROQ12816 1431 aaPredicted RBP23.84■■□□□ 1.41
SNIP1-202ENST00000468040 MTUS2Q5JR59 1369 aa23.81■■□□□ 1.4
SNIP1-202ENST00000468040 ABCC10Q5T3U5 1492 aa23.81■■□□□ 1.4
SNIP1-202ENST00000468040 MAGI3Q5TCQ9 1506 aa23.79■■□□□ 1.4
SNIP1-202ENST00000468040 EHBP1L1Q8N3D4 1523 aa23.79■■□□□ 1.4
SNIP1-202ENST00000468040 DIP2BQ9P265 1576 aa23.78■■□□□ 1.4
SNIP1-202ENST00000468040 LRRC9Q6ZRR7 1453 aa23.77■■□□□ 1.4
SNIP1-202ENST00000468040 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
SNIP1-202ENST00000468040 KIF14Q15058 1648 aa23.77■■□□□ 1.4
SNIP1-202ENST00000468040 GLI2P10070 1586 aa23.75■■□□□ 1.39
SNIP1-202ENST00000468040 FAM69CQ0P6D2 419 aa23.72■■□□□ 1.39
SNIP1-202ENST00000468040 KANK4Q5T7N3 995 aaPredicted RBP23.71■■□□□ 1.39
SNIP1-202ENST00000468040 KIF13AQ9H1H9 1805 aa23.7■■□□□ 1.39
SNIP1-202ENST00000468040 ABCA9Q8IUA7 1624 aa23.7■■□□□ 1.39
SNIP1-202ENST00000468040 TRHP20396 242 aaPredicted RBP23.69■■□□□ 1.38
SNIP1-202ENST00000468040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.69■■□□□ 1.38
SNIP1-202ENST00000468040 SUPT6HQ7KZ85 1726 aaKnown RBP23.68■■□□□ 1.38
SNIP1-202ENST00000468040 MAP3K4Q9Y6R4 1608 aa23.66■■□□□ 1.38
SNIP1-202ENST00000468040 TTC37Q6PGP7 1564 aa23.65■■□□□ 1.38
SNIP1-202ENST00000468040 NCOA2Q15596 1464 aa23.62■■□□□ 1.37
SNIP1-202ENST00000468040 CD109Q6YHK3 1445 aa23.62■■□□□ 1.37
SNIP1-202ENST00000468040 MYO5CQ9NQX4 1742 aa23.59■■□□□ 1.37
SNIP1-202ENST00000468040 CCNB3Q8WWL7 1395 aa23.58■■□□□ 1.37
SNIP1-202ENST00000468040 ARAP3Q8WWN8 1544 aa23.56■■□□□ 1.36
SNIP1-202ENST00000468040 PLCH2O75038 1416 aa23.56■■□□□ 1.36
SNIP1-202ENST00000468040 TEX14Q8IWB6 1497 aa23.55■■□□□ 1.36
SNIP1-202ENST00000468040 PREX2Q70Z35 1606 aa23.55■■□□□ 1.36
SNIP1-202ENST00000468040 ITSN2Q9NZM3 1697 aa23.54■■□□□ 1.36
SNIP1-202ENST00000468040 GPATCH8Q9UKJ3 1502 aaKnown RBP23.54■■□□□ 1.36
SNIP1-202ENST00000468040 CDC42BPAQ5VT25 1732 aa23.54■■□□□ 1.36
SNIP1-202ENST00000468040 PPARGC1BQ86YN6 1023 aaKnown RBP23.53■■□□□ 1.36
SNIP1-202ENST00000468040 TSPOAP1O95153 1857 aa23.53■■□□□ 1.36
SNIP1-202ENST00000468040 PPRC1Q5VV67 1664 aaKnown RBP23.51■■□□□ 1.35
SNIP1-202ENST00000468040 ARHGAP5Q13017 1502 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms