RNA–Protein interactions for RNA: ENST00000467854.1

CNTNAP3B-204, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 1,238 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-204ENST00000467854 GOLGA3Q08378 1498 aa36.89■■■■□ 3.5
CNTNAP3B-204ENST00000467854 KIAA0586Q9BVV6 1533 aa36.87■■■■□ 3.49
CNTNAP3B-204ENST00000467854 EHMT2Q96KQ7 1210 aa36.83■■■■□ 3.49
CNTNAP3B-204ENST00000467854 IQGAP2Q13576 1575 aa36.83■■■■□ 3.49
CNTNAP3B-204ENST00000467854 SHROOM2Q13796 1616 aa36.8■■■■□ 3.48
CNTNAP3B-204ENST00000467854 UBTFP17480 764 aaKnown RBP36.66■■■■□ 3.46
CNTNAP3B-204ENST00000467854 ARHGEF11O15085 1522 aa36.64■■■■□ 3.46
CNTNAP3B-204ENST00000467854 JPH4Q96JJ6 628 aa36.64■■■■□ 3.46
CNTNAP3B-204ENST00000467854 UGGT2Q9NYU1 1516 aa36.61■■■■□ 3.45
CNTNAP3B-204ENST00000467854 RIMBP3CA6NJZ7 1639 aa36.61■■■■□ 3.45
CNTNAP3B-204ENST00000467854 RIMBP3BA6NNM3 1639 aa36.61■■■■□ 3.45
CNTNAP3B-204ENST00000467854 RIMBP3Q9UFD9 1639 aa36.61■■■■□ 3.45
CNTNAP3B-204ENST00000467854 ERCC6L2Q5T890 1561 aa36.61■■■■□ 3.45
CNTNAP3B-204ENST00000467854 PRG4Q92954 1404 aaPredicted RBP36.59■■■■□ 3.45
CNTNAP3B-204ENST00000467854 DISP1Q96F81 1524 aa36.49■■■■□ 3.43
CNTNAP3B-204ENST00000467854 KIAA0556O60303 1618 aa36.48■■■■□ 3.43
CNTNAP3B-204ENST00000467854 LOC105371045A0A1W2PR82 267 aa36.47■■■■□ 3.43
CNTNAP3B-204ENST00000467854 TNIKQ9UKE5 1360 aa36.47■■■■□ 3.43
CNTNAP3B-204ENST00000467854 CARMIL2Q6F5E8 1435 aa36.45■■■■□ 3.43
CNTNAP3B-204ENST00000467854 SAMD9Q5K651 1589 aa36.44■■■■□ 3.42
CNTNAP3B-204ENST00000467854 RANGAP1P46060 587 aaPredicted RBP36.42■■■■□ 3.42
CNTNAP3B-204ENST00000467854 ARAP1Q96P48 1450 aa36.4■■■■□ 3.42
CNTNAP3B-204ENST00000467854 EFCAB5A4FU69 1503 aa36.37■■■■□ 3.41
CNTNAP3B-204ENST00000467854 ARHGAP35Q9NRY4 1499 aa36.26■■■■□ 3.4
CNTNAP3B-204ENST00000467854 P3H3Q8IVL6 736 aa36.25■■■■□ 3.39
CNTNAP3B-204ENST00000467854 CLIP1P30622 1438 aa36.23■■■■□ 3.39
CNTNAP3B-204ENST00000467854 FHOD3Q2V2M9 1422 aa36.22■■■■□ 3.39
CNTNAP3B-204ENST00000467854 CEP162Q5TB80 1403 aa36.22■■■■□ 3.39
CNTNAP3B-204ENST00000467854 TTBK1Q5TCY1 1321 aaPredicted RBP36.21■■■■□ 3.39
CNTNAP3B-204ENST00000467854 PTPRGP23470 1445 aa36.2■■■■□ 3.39
CNTNAP3B-204ENST00000467854 CYB5RLQ6IPT4 315 aa36.17■■■■□ 3.38
CNTNAP3B-204ENST00000467854 ADCY10Q96PN6 1610 aa36.03■■■■□ 3.36
CNTNAP3B-204ENST00000467854 PLB1Q6P1J6 1458 aa36.02■■■■□ 3.36
CNTNAP3B-204ENST00000467854 ABCA8O94911 1581 aa36.02■■■■□ 3.36
CNTNAP3B-204ENST00000467854 UACAQ9BZF9 1416 aa36■■■■□ 3.35
CNTNAP3B-204ENST00000467854 ABCC2Q92887 1545 aa35.98■■■■□ 3.35
CNTNAP3B-204ENST00000467854 FMN1Q68DA7 1419 aa35.97■■■■□ 3.35
CNTNAP3B-204ENST00000467854 RAPGEF6Q8TEU7 1601 aa35.97■■■■□ 3.35
CNTNAP3B-204ENST00000467854 UHRF1BP1LA0JNW5 1464 aa35.95■■■■□ 3.35
CNTNAP3B-204ENST00000467854 PCF11O94913 1555 aaKnown RBP35.87■■■■□ 3.33
CNTNAP3B-204ENST00000467854 HECW1Q76N89 1606 aa35.82■■■■□ 3.32
CNTNAP3B-204ENST00000467854 NUP153P49790 1475 aaKnown RBP35.8■■■■□ 3.32
CNTNAP3B-204ENST00000467854 ZCCHC11Q5TAX3 1644 aaKnown RBP35.79■■■■□ 3.32
CNTNAP3B-204ENST00000467854 KDM5BQ9UGL1 1544 aa35.78■■■■□ 3.32
CNTNAP3B-204ENST00000467854 CASKIN1Q8WXD9 1431 aa35.76■■■■□ 3.32
CNTNAP3B-204ENST00000467854 FYCO1Q9BQS8 1478 aa35.74■■■■□ 3.31
CNTNAP3B-204ENST00000467854 VPS8Q8N3P4 1428 aa35.74■■■■□ 3.31
CNTNAP3B-204ENST00000467854 ARID3CA6NKF2 412 aa35.7■■■■□ 3.31
CNTNAP3B-204ENST00000467854 NPM1P06748 294 aaKnown RBP eCLIP35.7■■■■□ 3.31
CNTNAP3B-204ENST00000467854 LRRIQ1Q96JM4 1722 aa35.7■■■■□ 3.31
CNTNAP3B-204ENST00000467854 ATP1B4Q9UN42 357 aaPredicted RBP35.68■■■■□ 3.3
CNTNAP3B-204ENST00000467854 ATP10BO94823 1461 aa35.67■■■■□ 3.3
CNTNAP3B-204ENST00000467854 CDK13Q14004 1512 aaKnown RBP35.66■■■■□ 3.3
CNTNAP3B-204ENST00000467854 MAPKBP1O60336 1514 aa35.65■■■■□ 3.3
CNTNAP3B-204ENST00000467854 EPRSP07814 1512 aaKnown RBP35.64■■■■□ 3.3
CNTNAP3B-204ENST00000467854 CCDC18Q5T9S5 1454 aa35.59■■■■□ 3.29
CNTNAP3B-204ENST00000467854 ASXL2Q76L83 1435 aa35.56■■■■□ 3.28
CNTNAP3B-204ENST00000467854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.54■■■■□ 3.28
CNTNAP3B-204ENST00000467854 HNRNPUL2Q1KMD3 747 aaKnown RBP35.54■■■■□ 3.28
CNTNAP3B-204ENST00000467854 WDR7Q9Y4E6 1490 aa35.5■■■■□ 3.27
CNTNAP3B-204ENST00000467854 CFAP43Q8NDM7 1665 aa35.49■■■■□ 3.27
CNTNAP3B-204ENST00000467854 TIAM1Q13009 1591 aa35.42■■■■□ 3.26
CNTNAP3B-204ENST00000467854 DIP2BQ9P265 1576 aa35.42■■■■□ 3.26
CNTNAP3B-204ENST00000467854 ABCC10Q5T3U5 1492 aa35.38■■■■□ 3.25
CNTNAP3B-204ENST00000467854 MAGI3Q5TCQ9 1506 aa35.37■■■■□ 3.25
CNTNAP3B-204ENST00000467854 KIF13AQ9H1H9 1805 aa35.36■■■■□ 3.25
CNTNAP3B-204ENST00000467854 PLEKHD1A6NEE1 506 aa35.35■■■■□ 3.25
CNTNAP3B-204ENST00000467854 CDK11AQ9UQ88 783 aaPredicted RBP35.34■■■■□ 3.25
CNTNAP3B-204ENST00000467854 TROQ12816 1431 aaPredicted RBP35.32■■■■□ 3.25
CNTNAP3B-204ENST00000467854 MAP3K1Q13233 1512 aa35.32■■■■□ 3.25
CNTNAP3B-204ENST00000467854 GLI2P10070 1586 aa35.29■■■■□ 3.24
CNTNAP3B-204ENST00000467854 KCNH8Q96L42 1107 aa35.28■■■■□ 3.24
CNTNAP3B-204ENST00000467854 EHBP1L1Q8N3D4 1523 aa35.27■■■■□ 3.24
CNTNAP3B-204ENST00000467854 KIF14Q15058 1648 aa35.27■■■■□ 3.24
CNTNAP3B-204ENST00000467854 TRHP20396 242 aaPredicted RBP35.25■■■■□ 3.23
CNTNAP3B-204ENST00000467854 APLP2Q06481 763 aa35.24■■■■□ 3.23
CNTNAP3B-204ENST00000467854 MTUS2Q5JR59 1369 aa35.24■■■■□ 3.23
CNTNAP3B-204ENST00000467854 FAM69CQ0P6D2 419 aa35.23■■■■□ 3.23
CNTNAP3B-204ENST00000467854 ABCA9Q8IUA7 1624 aa35.21■■■■□ 3.23
CNTNAP3B-204ENST00000467854 LRRC9Q6ZRR7 1453 aa35.21■■■■□ 3.23
CNTNAP3B-204ENST00000467854 TTC37Q6PGP7 1564 aa35.19■■■■□ 3.22
CNTNAP3B-204ENST00000467854 MAP3K4Q9Y6R4 1608 aa35.19■■■■□ 3.22
CNTNAP3B-204ENST00000467854 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.18■■■■□ 3.22
CNTNAP3B-204ENST00000467854 KANK4Q5T7N3 995 aaPredicted RBP35.12■■■■□ 3.21
CNTNAP3B-204ENST00000467854 SUPT6HQ7KZ85 1726 aaKnown RBP35.12■■■■□ 3.21
CNTNAP3B-204ENST00000467854 TSPOAP1O95153 1857 aa35.09■■■■□ 3.21
CNTNAP3B-204ENST00000467854 PPRC1Q5VV67 1664 aaKnown RBP35.06■■■■□ 3.2
CNTNAP3B-204ENST00000467854 CD109Q6YHK3 1445 aa35.06■■■■□ 3.2
CNTNAP3B-204ENST00000467854 MYO5CQ9NQX4 1742 aa35.05■■■■□ 3.2
CNTNAP3B-204ENST00000467854 NCOA2Q15596 1464 aa35.03■■■■□ 3.2
CNTNAP3B-204ENST00000467854 CDC42BPAQ5VT25 1732 aa34.99■■■■□ 3.19
CNTNAP3B-204ENST00000467854 PREX2Q70Z35 1606 aa34.98■■■■□ 3.19
CNTNAP3B-204ENST00000467854 ITSN2Q9NZM3 1697 aa34.93■■■■□ 3.18
CNTNAP3B-204ENST00000467854 CDC42BPBQ9Y5S2 1711 aa34.92■■■■□ 3.18
CNTNAP3B-204ENST00000467854 TEX14Q8IWB6 1497 aa34.92■■■■□ 3.18
CNTNAP3B-204ENST00000467854 PLCH2O75038 1416 aa34.92■■■■□ 3.18
CNTNAP3B-204ENST00000467854 CCNB3Q8WWL7 1395 aa34.92■■■■□ 3.18
CNTNAP3B-204ENST00000467854 ARAP3Q8WWN8 1544 aa34.91■■■■□ 3.18
CNTNAP3B-204ENST00000467854 GPATCH8Q9UKJ3 1502 aaKnown RBP34.91■■■■□ 3.18
CNTNAP3B-204ENST00000467854 PPARGC1BQ86YN6 1023 aaKnown RBP34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms