RNA–Protein interactions for RNA: ENST00000467728.5

NR1H3-217, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-217ENST00000467728 WDR97A6NE52 1622 aa18.12■□□□□ 0.49
NR1H3-217ENST00000467728 ANO8Q9HCE9 1232 aaPredicted RBP18.12■□□□□ 0.49
NR1H3-217ENST00000467728 RRBP1Q9P2E9 1410 aaKnown RBP18.11■□□□□ 0.49
NR1H3-217ENST00000467728 RAB3GAP2Q9H2M9 1393 aa18.11■□□□□ 0.49
NR1H3-217ENST00000467728 MAPKBP1O60336 1514 aa18.09■□□□□ 0.49
NR1H3-217ENST00000467728 HMGXB3Q12766 1538 aa18.09■□□□□ 0.49
NR1H3-217ENST00000467728 CCNB3Q8WWL7 1395 aa18.09■□□□□ 0.49
NR1H3-217ENST00000467728 CUX2O14529 1486 aa18.08■□□□□ 0.48
NR1H3-217ENST00000467728 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
NR1H3-217ENST00000467728 NBR1Q14596 966 aa18.07■□□□□ 0.48
NR1H3-217ENST00000467728 MYT1LQ9UL68 1186 aa18.06■□□□□ 0.48
NR1H3-217ENST00000467728 ARAP1Q96P48 1450 aa18.05■□□□□ 0.48
NR1H3-217ENST00000467728 HNRNPUQ00839 825 aaKnown RBP eCLIP18.05■□□□□ 0.48
NR1H3-217ENST00000467728 PAK3O75914 559 aaPredicted RBP17.97■□□□□ 0.47
NR1H3-217ENST00000467728 B4GALNT3Q6L9W6 998 aa17.95■□□□□ 0.46
NR1H3-217ENST00000467728 SALL2Q9Y467 1007 aaPredicted RBP17.95■□□□□ 0.46
NR1H3-217ENST00000467728 PPP4R2Q9NY27 417 aa17.94■□□□□ 0.46
NR1H3-217ENST00000467728 NOP58Q9Y2X3 529 aaKnown RBP17.94■□□□□ 0.46
NR1H3-217ENST00000467728 SETD5Q9C0A6 1442 aa17.93■□□□□ 0.46
NR1H3-217ENST00000467728 FAM50AQ14320 339 aaKnown RBP17.87■□□□□ 0.45
NR1H3-217ENST00000467728 CCDC136Q96JN2 1154 aa17.86■□□□□ 0.45
NR1H3-217ENST00000467728 TIMELESSQ9UNS1 1208 aa17.84■□□□□ 0.45
NR1H3-217ENST00000467728 IL27Q8NEV9 243 aa17.84■□□□□ 0.45
NR1H3-217ENST00000467728 PRXQ9BXM0 1461 aa17.83■□□□□ 0.45
NR1H3-217ENST00000467728 ERICH6BQ5W0A0 696 aa17.83■□□□□ 0.45
NR1H3-217ENST00000467728 RTN4Q9NQC3 1192 aaKnown RBP17.83■□□□□ 0.45
NR1H3-217ENST00000467728 CCDC184Q52MB2 194 aa17.8■□□□□ 0.44
NR1H3-217ENST00000467728 CFTRP13569 1480 aa17.79■□□□□ 0.44
NR1H3-217ENST00000467728 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
NR1H3-217ENST00000467728 ARHGAP35Q9NRY4 1499 aa17.77■□□□□ 0.44
NR1H3-217ENST00000467728 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.43
NR1H3-217ENST00000467728 PHLDB1Q86UU1 1377 aa17.76■□□□□ 0.43
NR1H3-217ENST00000467728 TONSLQ96HA7 1378 aa17.75■□□□□ 0.43
NR1H3-217ENST00000467728 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
NR1H3-217ENST00000467728 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.74■□□□□ 0.43
NR1H3-217ENST00000467728 IPO9Q96P70 1041 aaKnown RBP17.72■□□□□ 0.43
NR1H3-217ENST00000467728 CADPSQ9ULU8 1353 aa17.72■□□□□ 0.43
NR1H3-217ENST00000467728 TOP2BQ02880 1626 aa17.71■□□□□ 0.42
NR1H3-217ENST00000467728 ZBTB47Q9UFB7 747 aaPredicted RBP17.7■□□□□ 0.42
NR1H3-217ENST00000467728 ANP32AP39687 249 aaKnown RBP17.7■□□□□ 0.42
NR1H3-217ENST00000467728 WASHC2AQ641Q2 1341 aa17.68■□□□□ 0.42
NR1H3-217ENST00000467728 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
NR1H3-217ENST00000467728 TIAM1Q13009 1591 aa17.64■□□□□ 0.41
NR1H3-217ENST00000467728 LRRC9Q6ZRR7 1453 aa17.63■□□□□ 0.41
NR1H3-217ENST00000467728 HSPA5P11021 654 aaKnown RBP17.63■□□□□ 0.41
NR1H3-217ENST00000467728 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
NR1H3-217ENST00000467728 NESP48681 1621 aa17.63■□□□□ 0.41
NR1H3-217ENST00000467728 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
NR1H3-217ENST00000467728 ZBED9Q6R2W3 1325 aa17.6■□□□□ 0.41
NR1H3-217ENST00000467728 CUX1P39880 1505 aa17.6■□□□□ 0.41
NR1H3-217ENST00000467728 P3H3Q8IVL6 736 aa17.58■□□□□ 0.41
NR1H3-217ENST00000467728 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
NR1H3-217ENST00000467728 KIF27Q86VH2 1401 aa17.58■□□□□ 0.4
NR1H3-217ENST00000467728 LAS1LQ9Y4W2 734 aaKnown RBP17.58■□□□□ 0.4
NR1H3-217ENST00000467728 PRKRIP1Q9H875 184 aaPredicted RBP17.57■□□□□ 0.4
NR1H3-217ENST00000467728 SENP3-EIF4A1A0A087X0R7 540 aa17.57■□□□□ 0.4
NR1H3-217ENST00000467728 BIVM-ERCC5R4GMW8 1640 aa17.57■□□□□ 0.4
NR1H3-217ENST00000467728 AKNAQ7Z591 1439 aa17.57■□□□□ 0.4
NR1H3-217ENST00000467728 FHAD1B1AJZ9 1412 aa17.56■□□□□ 0.4
NR1H3-217ENST00000467728 C11orf95C9JLR9 678 aaPredicted RBP17.55■□□□□ 0.4
NR1H3-217ENST00000467728 NEFMP07197 916 aa17.55■□□□□ 0.4
NR1H3-217ENST00000467728 CNGB1Q14028 1251 aaPredicted RBP17.53■□□□□ 0.4
NR1H3-217ENST00000467728 MAP3K1Q13233 1512 aa17.53■□□□□ 0.4
NR1H3-217ENST00000467728 FANCD2Q9BXW9 1451 aa17.52■□□□□ 0.4
NR1H3-217ENST00000467728 EIF4G2P78344 907 aaKnown RBP eCLIP17.5■□□□□ 0.39
NR1H3-217ENST00000467728 UBE2Q2Q8WVN8 375 aa17.5■□□□□ 0.39
NR1H3-217ENST00000467728 CNTLNQ9NXG0 1405 aa17.5■□□□□ 0.39
NR1H3-217ENST00000467728 CCDC18Q5T9S5 1454 aa17.48■□□□□ 0.39
NR1H3-217ENST00000467728 LAMC3Q9Y6N6 1575 aa17.48■□□□□ 0.39
NR1H3-217ENST00000467728 KDM5BQ9UGL1 1544 aa17.47■□□□□ 0.39
NR1H3-217ENST00000467728 BRPF3Q9ULD4 1205 aa17.47■□□□□ 0.39
NR1H3-217ENST00000467728 UACAQ9BZF9 1416 aa17.46■□□□□ 0.39
NR1H3-217ENST00000467728 AQRO60306 1485 aaKnown RBP eCLIP17.45■□□□□ 0.389e-8■■■■□ 21.2
NR1H3-217ENST00000467728 EIF5BO60841 1220 aaKnown RBP17.45■□□□□ 0.38
NR1H3-217ENST00000467728 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
NR1H3-217ENST00000467728 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
NR1H3-217ENST00000467728 PTPRKQ15262 1439 aa17.43■□□□□ 0.38
NR1H3-217ENST00000467728 SMG6Q86US8 1419 aaKnown RBP17.42■□□□□ 0.38
NR1H3-217ENST00000467728 WASHC2CQ9Y4E1 1318 aa17.42■□□□□ 0.38
NR1H3-217ENST00000467728 CCDC7Q96M83 1385 aa17.41■□□□□ 0.38
NR1H3-217ENST00000467728 RNF123Q5XPI4 1314 aa17.41■□□□□ 0.38
NR1H3-217ENST00000467728 IGF1RP08069 1367 aa17.4■□□□□ 0.38
NR1H3-217ENST00000467728 USP35Q9P2H5 1018 aa17.4■□□□□ 0.38
NR1H3-217ENST00000467728 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
NR1H3-217ENST00000467728 PDE4AP27815 886 aa17.37■□□□□ 0.37
NR1H3-217ENST00000467728 PCF11O94913 1555 aaKnown RBP17.37■□□□□ 0.37
NR1H3-217ENST00000467728 HFM1A2PYH4 1435 aa17.37■□□□□ 0.37
NR1H3-217ENST00000467728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.37■□□□□ 0.37
NR1H3-217ENST00000467728 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
NR1H3-217ENST00000467728 FGD6Q6ZV73 1430 aa17.36■□□□□ 0.37
NR1H3-217ENST00000467728 L3MBTL2Q969R5 705 aa17.35■□□□□ 0.37
NR1H3-217ENST00000467728 NCOA1Q15788 1441 aa17.35■□□□□ 0.37
NR1H3-217ENST00000467728 TOPBP1Q92547 1522 aa17.35■□□□□ 0.37
NR1H3-217ENST00000467728 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
NR1H3-217ENST00000467728 NAIPQ13075 1403 aa17.34■□□□□ 0.37
NR1H3-217ENST00000467728 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
NR1H3-217ENST00000467728 RRP7BPQ9NSQ0 103 aa17.34■□□□□ 0.37
NR1H3-217ENST00000467728 KIF21AQ7Z4S6 1674 aa17.34■□□□□ 0.37
NR1H3-217ENST00000467728 CFAP43Q8NDM7 1665 aa17.34■□□□□ 0.37
NR1H3-217ENST00000467728 URB2Q14146 1524 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms