RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 KIF21BO75037 1637 aa21.86■■□□□ 1.09
PDCD11-202ENST00000466959 RAPGEF2Q9Y4G8 1499 aa21.83■■□□□ 1.08
PDCD11-202ENST00000466959 GRIN2AQ12879 1464 aa21.79■■□□□ 1.08
PDCD11-202ENST00000466959 CHMP7Q8WUX9 453 aaPredicted RBP21.76■■□□□ 1.07
PDCD11-202ENST00000466959 GOLGA3Q08378 1498 aa21.73■■□□□ 1.07
PDCD11-202ENST00000466959 CTTNBP2Q8WZ74 1663 aa21.67■■□□□ 1.06
PDCD11-202ENST00000466959 CEP170Q5SW79 1584 aa21.67■■□□□ 1.06
PDCD11-202ENST00000466959 NUP160Q12769 1436 aa21.67■■□□□ 1.06
PDCD11-202ENST00000466959 CLASP1Q7Z460 1538 aa21.65■■□□□ 1.06
PDCD11-202ENST00000466959 EHMT2Q96KQ7 1210 aa21.61■■□□□ 1.05
PDCD11-202ENST00000466959 KIAA0586Q9BVV6 1533 aa21.58■■□□□ 1.04
PDCD11-202ENST00000466959 UBTFP17480 764 aaKnown RBP21.57■■□□□ 1.04
PDCD11-202ENST00000466959 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
PDCD11-202ENST00000466959 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
PDCD11-202ENST00000466959 TNIKQ9UKE5 1360 aa21.53■■□□□ 1.04
PDCD11-202ENST00000466959 SHROOM2Q13796 1616 aa21.49■■□□□ 1.03
PDCD11-202ENST00000466959 UGGT2Q9NYU1 1516 aa21.45■■□□□ 1.02
PDCD11-202ENST00000466959 JPH4Q96JJ6 628 aa21.4■■□□□ 1.02
PDCD11-202ENST00000466959 SAMD9Q5K651 1589 aa21.39■■□□□ 1.01
PDCD11-202ENST00000466959 EFCAB5A4FU69 1503 aa21.38■■□□□ 1.01
PDCD11-202ENST00000466959 CEP162Q5TB80 1403 aa21.37■■□□□ 1.01
PDCD11-202ENST00000466959 KIAA0556O60303 1618 aa21.35■■□□□ 1.01
PDCD11-202ENST00000466959 PRG4Q92954 1404 aaPredicted RBP21.35■■□□□ 1.01
PDCD11-202ENST00000466959 DISP1Q96F81 1524 aa21.34■■□□□ 1.01
PDCD11-202ENST00000466959 CLIP1P30622 1438 aa21.33■■□□□ 1.01
PDCD11-202ENST00000466959 CARMIL2Q6F5E8 1435 aa21.33■■□□□ 1.01
PDCD11-202ENST00000466959 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
PDCD11-202ENST00000466959 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
PDCD11-202ENST00000466959 ARHGAP35Q9NRY4 1499 aa21.31■■□□□ 1
PDCD11-202ENST00000466959 FHOD3Q2V2M9 1422 aa21.23■□□□□ 0.99
PDCD11-202ENST00000466959 P3H3Q8IVL6 736 aa21.22■□□□□ 0.99
PDCD11-202ENST00000466959 PTPRGP23470 1445 aa21.15■□□□□ 0.98
PDCD11-202ENST00000466959 FMN1Q68DA7 1419 aa21.13■□□□□ 0.97
PDCD11-202ENST00000466959 NPM1P06748 294 aaKnown RBP eCLIP21.1■□□□□ 0.97
PDCD11-202ENST00000466959 TTBK1Q5TCY1 1321 aaPredicted RBP21.09■□□□□ 0.97
PDCD11-202ENST00000466959 RAPGEF6Q8TEU7 1601 aa21.08■□□□□ 0.97
PDCD11-202ENST00000466959 ABCA8O94911 1581 aa21.08■□□□□ 0.97
PDCD11-202ENST00000466959 VPS8Q8N3P4 1428 aa21.08■□□□□ 0.97
PDCD11-202ENST00000466959 FAM69CQ0P6D2 419 aa21.07■□□□□ 0.96
PDCD11-202ENST00000466959 PCF11O94913 1555 aaKnown RBP21.06■□□□□ 0.96
PDCD11-202ENST00000466959 KIF13AQ9H1H9 1805 aa21.06■□□□□ 0.96
PDCD11-202ENST00000466959 PLB1Q6P1J6 1458 aa21.05■□□□□ 0.96
PDCD11-202ENST00000466959 UACAQ9BZF9 1416 aa21.04■□□□□ 0.96
PDCD11-202ENST00000466959 FYCO1Q9BQS8 1478 aa21.03■□□□□ 0.96
PDCD11-202ENST00000466959 ABCC2Q92887 1545 aa21.03■□□□□ 0.96
PDCD11-202ENST00000466959 CASKIN1Q8WXD9 1431 aa21.03■□□□□ 0.96
PDCD11-202ENST00000466959 UHRF1BP1LA0JNW5 1464 aa21.02■□□□□ 0.96
PDCD11-202ENST00000466959 ABCC10Q5T3U5 1492 aa21.02■□□□□ 0.96
PDCD11-202ENST00000466959 HECW1Q76N89 1606 aa21.02■□□□□ 0.96
PDCD11-202ENST00000466959 ADCY10Q96PN6 1610 aa21■□□□□ 0.95
PDCD11-202ENST00000466959 NUP153P49790 1475 aaKnown RBP20.97■□□□□ 0.95
PDCD11-202ENST00000466959 LRRIQ1Q96JM4 1722 aa20.97■□□□□ 0.95
PDCD11-202ENST00000466959 MAPKBP1O60336 1514 aa20.95■□□□□ 0.94
PDCD11-202ENST00000466959 KDM6BO15054 1643 aa20.93■□□□□ 0.94
PDCD11-202ENST00000466959 EPRSP07814 1512 aaKnown RBP20.91■□□□□ 0.94
PDCD11-202ENST00000466959 CCDC18Q5T9S5 1454 aa20.91■□□□□ 0.94
PDCD11-202ENST00000466959 DIP2BQ9P265 1576 aa20.91■□□□□ 0.94
PDCD11-202ENST00000466959 KDM5BQ9UGL1 1544 aa20.91■□□□□ 0.94
PDCD11-202ENST00000466959 ZCCHC11Q5TAX3 1644 aaKnown RBP20.9■□□□□ 0.94
PDCD11-202ENST00000466959 KDM4FA0A1W2PPD8 638 aa20.9■□□□□ 0.94
PDCD11-202ENST00000466959 ATP1B4Q9UN42 357 aaPredicted RBP20.9■□□□□ 0.94
PDCD11-202ENST00000466959 CFAP43Q8NDM7 1665 aa20.89■□□□□ 0.94
PDCD11-202ENST00000466959 ILDR1Q86SU0 546 aaPredicted RBP20.89■□□□□ 0.93
PDCD11-202ENST00000466959 ATP10BO94823 1461 aa20.88■□□□□ 0.93
PDCD11-202ENST00000466959 CDK13Q14004 1512 aaKnown RBP20.88■□□□□ 0.93
PDCD11-202ENST00000466959 MAP3K1Q13233 1512 aa20.86■□□□□ 0.93
PDCD11-202ENST00000466959 TIAM1Q13009 1591 aa20.85■□□□□ 0.93
PDCD11-202ENST00000466959 ARID3CA6NKF2 412 aa20.83■□□□□ 0.93
PDCD11-202ENST00000466959 APLP2Q06481 763 aa20.79■□□□□ 0.92
PDCD11-202ENST00000466959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.78■□□□□ 0.92
PDCD11-202ENST00000466959 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
PDCD11-202ENST00000466959 MAGI3Q5TCQ9 1506 aa20.75■□□□□ 0.91
PDCD11-202ENST00000466959 CDK11AQ9UQ88 783 aaPredicted RBP20.74■□□□□ 0.91
PDCD11-202ENST00000466959 EHBP1L1Q8N3D4 1523 aa20.73■□□□□ 0.91
PDCD11-202ENST00000466959 TSPOAP1O95153 1857 aa20.73■□□□□ 0.91
PDCD11-202ENST00000466959 ASXL2Q76L83 1435 aa20.73■□□□□ 0.91
PDCD11-202ENST00000466959 LRRC9Q6ZRR7 1453 aa20.73■□□□□ 0.91
PDCD11-202ENST00000466959 WDR7Q9Y4E6 1490 aa20.72■□□□□ 0.91
PDCD11-202ENST00000466959 TROQ12816 1431 aaPredicted RBP20.71■□□□□ 0.91
PDCD11-202ENST00000466959 MTUS2Q5JR59 1369 aa20.71■□□□□ 0.91
PDCD11-202ENST00000466959 PLEKHD1A6NEE1 506 aa20.7■□□□□ 0.9
PDCD11-202ENST00000466959 KIF14Q15058 1648 aa20.67■□□□□ 0.9
PDCD11-202ENST00000466959 KANK4Q5T7N3 995 aaPredicted RBP20.67■□□□□ 0.9
PDCD11-202ENST00000466959 ADGRL1O94910 1474 aa20.67■□□□□ 0.9
PDCD11-202ENST00000466959 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
PDCD11-202ENST00000466959 ABCA9Q8IUA7 1624 aa20.59■□□□□ 0.89
PDCD11-202ENST00000466959 GLI2P10070 1586 aa20.59■□□□□ 0.89
PDCD11-202ENST00000466959 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.58■□□□□ 0.89
PDCD11-202ENST00000466959 NCOA2Q15596 1464 aa20.58■□□□□ 0.89
PDCD11-202ENST00000466959 KCNH8Q96L42 1107 aa20.58■□□□□ 0.89
PDCD11-202ENST00000466959 TTC37Q6PGP7 1564 aa20.58■□□□□ 0.88
PDCD11-202ENST00000466959 PPARGC1BQ86YN6 1023 aaKnown RBP20.56■□□□□ 0.88
PDCD11-202ENST00000466959 TEX14Q8IWB6 1497 aa20.55■□□□□ 0.88
PDCD11-202ENST00000466959 HECW2Q9P2P5 1572 aa20.55■□□□□ 0.88
PDCD11-202ENST00000466959 MYO5CQ9NQX4 1742 aa20.54■□□□□ 0.88
PDCD11-202ENST00000466959 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
PDCD11-202ENST00000466959 ITSN2Q9NZM3 1697 aa20.53■□□□□ 0.88
PDCD11-202ENST00000466959 MAP3K4Q9Y6R4 1608 aa20.53■□□□□ 0.88
PDCD11-202ENST00000466959 PREX2Q70Z35 1606 aa20.51■□□□□ 0.87
PDCD11-202ENST00000466959 CCNB3Q8WWL7 1395 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms