RNA–Protein interactions for RNA: ENST00000466884.1

COL2A1-204, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 478 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-204ENST00000466884 GRIN2BQ13224 1484 aa15.25■□□□□ 0.03
COL2A1-204ENST00000466884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL2A1-204ENST00000466884 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
COL2A1-204ENST00000466884 FGD5Q6ZNL6 1462 aa15.23■□□□□ 0.03
COL2A1-204ENST00000466884 NPM3O75607 178 aaKnown RBP15.22■□□□□ 0.03
COL2A1-204ENST00000466884 CUX1P39880 1505 aa15.13■□□□□ 0.01
COL2A1-204ENST00000466884 PBRM1Q86U86 1689 aa15.12■□□□□ 0.01
COL2A1-204ENST00000466884 ERCC6L2Q5T890 1561 aa15.09■□□□□ 0.01
COL2A1-204ENST00000466884 GRIN2AQ12879 1464 aa15.04■□□□□ -0
COL2A1-204ENST00000466884 CEP170Q5SW79 1584 aa15.03■□□□□ -0
COL2A1-204ENST00000466884 KIF13AQ9H1H9 1805 aa15.03■□□□□ -0
COL2A1-204ENST00000466884 ABCA10Q8WWZ4 1543 aa15.02■□□□□ -0
COL2A1-204ENST00000466884 FAM69CQ0P6D2 419 aa15.01□□□□□ -0.01
COL2A1-204ENST00000466884 ABCA5Q8WWZ7 1642 aa15.01□□□□□ -0.01
COL2A1-204ENST00000466884 ILDR1Q86SU0 546 aaPredicted RBP15□□□□□ -0.01
COL2A1-204ENST00000466884 NPM1P06748 294 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL2A1-204ENST00000466884 NUP160Q12769 1436 aa14.99□□□□□ -0.01
COL2A1-204ENST00000466884 KDM4FA0A1W2PPD8 638 aa14.96□□□□□ -0.01
COL2A1-204ENST00000466884 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
COL2A1-204ENST00000466884 JPH4Q96JJ6 628 aa14.94□□□□□ -0.02
COL2A1-204ENST00000466884 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
COL2A1-204ENST00000466884 FHAD1B1AJZ9 1412 aa14.93□□□□□ -0.02
COL2A1-204ENST00000466884 PRG4Q92954 1404 aaPredicted RBP14.93□□□□□ -0.02
COL2A1-204ENST00000466884 ADAMTS12P58397 1594 aa14.93□□□□□ -0.02
COL2A1-204ENST00000466884 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
COL2A1-204ENST00000466884 ABCC10Q5T3U5 1492 aa14.92□□□□□ -0.02
COL2A1-204ENST00000466884 KDM6BO15054 1643 aa14.85□□□□□ -0.03
COL2A1-204ENST00000466884 MAPKBP1O60336 1514 aa14.84□□□□□ -0.03
COL2A1-204ENST00000466884 ERICH3Q5RHP9 1530 aa14.83□□□□□ -0.04
COL2A1-204ENST00000466884 DIP2BQ9P265 1576 aa14.83□□□□□ -0.04
COL2A1-204ENST00000466884 TSPOAP1O95153 1857 aa14.81□□□□□ -0.04
COL2A1-204ENST00000466884 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
COL2A1-204ENST00000466884 DSG3P32926 999 aa14.78□□□□□ -0.04
COL2A1-204ENST00000466884 TOP2BQ02880 1626 aa14.77□□□□□ -0.05
COL2A1-204ENST00000466884 ADCY10Q96PN6 1610 aa14.77□□□□□ -0.05
COL2A1-204ENST00000466884 BIVM-ERCC5R4GMW8 1640 aa14.76□□□□□ -0.05
COL2A1-204ENST00000466884 CAPN15O75808 1086 aa14.75□□□□□ -0.05
COL2A1-204ENST00000466884 RUSC2Q8N2Y8 1516 aa14.72□□□□□ -0.05
COL2A1-204ENST00000466884 TTBK1Q5TCY1 1321 aaPredicted RBP14.69□□□□□ -0.06
COL2A1-204ENST00000466884 SUPT5HO00267 1087 aaKnown RBP14.69□□□□□ -0.06
COL2A1-204ENST00000466884 ADGRL1O94910 1474 aa14.69□□□□□ -0.06
COL2A1-204ENST00000466884 KCNA4P22459 653 aa14.67□□□□□ -0.06
COL2A1-204ENST00000466884 PTPRGP23470 1445 aa14.66□□□□□ -0.06
COL2A1-204ENST00000466884 KIAA0586Q9BVV6 1533 aa14.66□□□□□ -0.06
COL2A1-204ENST00000466884 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
COL2A1-204ENST00000466884 HECW2Q9P2P5 1572 aa14.61□□□□□ -0.07
COL2A1-204ENST00000466884 ASXL2Q76L83 1435 aa14.61□□□□□ -0.07
COL2A1-204ENST00000466884 PLB1Q6P1J6 1458 aa14.61□□□□□ -0.07
COL2A1-204ENST00000466884 GLI2P10070 1586 aa14.6□□□□□ -0.07
COL2A1-204ENST00000466884 ABCC2Q92887 1545 aa14.59□□□□□ -0.07
COL2A1-204ENST00000466884 IGF1RP08069 1367 aa14.59□□□□□ -0.07
COL2A1-204ENST00000466884 PPRC1Q5VV67 1664 aaKnown RBP14.58□□□□□ -0.07
COL2A1-204ENST00000466884 POTEHQ6S545 545 aa14.58□□□□□ -0.08
COL2A1-204ENST00000466884 TNIKQ9UKE5 1360 aa14.58□□□□□ -0.08
COL2A1-204ENST00000466884 CARMIL2Q6F5E8 1435 aa14.58□□□□□ -0.08
COL2A1-204ENST00000466884 COL17A1Q9UMD9 1497 aaPredicted RBP14.57□□□□□ -0.08
COL2A1-204ENST00000466884 CUL7Q14999 1698 aa14.53□□□□□ -0.08
COL2A1-204ENST00000466884 FBXO41Q8TF61 875 aa14.53□□□□□ -0.08
COL2A1-204ENST00000466884 TEX14Q8IWB6 1497 aa14.52□□□□□ -0.08
COL2A1-204ENST00000466884 KIF27Q86VH2 1401 aa14.52□□□□□ -0.08
COL2A1-204ENST00000466884 UHRF1BP1LA0JNW5 1464 aa14.51□□□□□ -0.09
COL2A1-204ENST00000466884 UACAQ9BZF9 1416 aa14.51□□□□□ -0.09
COL2A1-204ENST00000466884 EPRSP07814 1512 aaKnown RBP14.51□□□□□ -0.09
COL2A1-204ENST00000466884 CARMIL1Q5VZK9 1371 aa14.48□□□□□ -0.09
COL2A1-204ENST00000466884 MAP3K4Q9Y6R4 1608 aa14.48□□□□□ -0.09
COL2A1-204ENST00000466884 KDM5BQ9UGL1 1544 aa14.45□□□□□ -0.1
COL2A1-204ENST00000466884 IQGAP2Q13576 1575 aa14.43□□□□□ -0.1
COL2A1-204ENST00000466884 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
COL2A1-204ENST00000466884 ZCCHC11Q5TAX3 1644 aaKnown RBP14.41□□□□□ -0.1
COL2A1-204ENST00000466884 APLP2Q06481 763 aa14.41□□□□□ -0.1
COL2A1-204ENST00000466884 KCNH8Q96L42 1107 aa14.41□□□□□ -0.1
COL2A1-204ENST00000466884 DISP1Q96F81 1524 aa14.41□□□□□ -0.1
COL2A1-204ENST00000466884 ABCB7O75027 752 aa14.4□□□□□ -0.1
COL2A1-204ENST00000466884 CD109Q6YHK3 1445 aa14.39□□□□□ -0.11
COL2A1-204ENST00000466884 WDR7Q9Y4E6 1490 aa14.38□□□□□ -0.11
COL2A1-204ENST00000466884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.35□□□□□ -0.11
COL2A1-204ENST00000466884 HNRNPUL2Q1KMD3 747 aaKnown RBP14.35□□□□□ -0.11
COL2A1-204ENST00000466884 MAGI3Q5TCQ9 1506 aa14.35□□□□□ -0.11
COL2A1-204ENST00000466884 UGGT2Q9NYU1 1516 aa14.33□□□□□ -0.12
COL2A1-204ENST00000466884 KIF21BO75037 1637 aa14.33□□□□□ -0.12
COL2A1-204ENST00000466884 CFAP43Q8NDM7 1665 aa14.32□□□□□ -0.12
COL2A1-204ENST00000466884 KIAA0556O60303 1618 aa14.3□□□□□ -0.12
COL2A1-204ENST00000466884 PTPRMP28827 1452 aa14.29□□□□□ -0.12
COL2A1-204ENST00000466884 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
COL2A1-204ENST00000466884 RAPGEF2Q9Y4G8 1499 aa14.28□□□□□ -0.12
COL2A1-204ENST00000466884 ARAP3Q8WWN8 1544 aa14.25□□□□□ -0.13
COL2A1-204ENST00000466884 LMTK3Q96Q04 1460 aa14.25□□□□□ -0.13
COL2A1-204ENST00000466884 ARID4BQ4LE39 1312 aaPredicted RBP14.25□□□□□ -0.13
COL2A1-204ENST00000466884 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
COL2A1-204ENST00000466884 ADAMTSL3P82987 1691 aa14.23□□□□□ -0.13
COL2A1-204ENST00000466884 RAPGEF3O95398 923 aa14.22□□□□□ -0.13
COL2A1-204ENST00000466884 PHLDB1Q86UU1 1377 aa14.22□□□□□ -0.13
COL2A1-204ENST00000466884 GOLGA3Q08378 1498 aa14.21□□□□□ -0.13
COL2A1-204ENST00000466884 ABCA8O94911 1581 aa14.2□□□□□ -0.14
COL2A1-204ENST00000466884 PCF11O94913 1555 aaKnown RBP14.2□□□□□ -0.14
COL2A1-204ENST00000466884 ARID3CA6NKF2 412 aa14.19□□□□□ -0.14
COL2A1-204ENST00000466884 CERKQ8TCT0 537 aa14.18□□□□□ -0.14
COL2A1-204ENST00000466884 HSPA2P54652 639 aa14.17□□□□□ -0.14
COL2A1-204ENST00000466884 BCORL1Q5H9F3 1711 aa14.16□□□□□ -0.14
COL2A1-204ENST00000466884 MADDQ8WXG6 1647 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms