RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 DNMBPQ6XZF7 1577 aa15.3■□□□□ 0.04
UFD1-206ENST00000466373 TIAM1Q13009 1591 aa15.29■□□□□ 0.04
UFD1-206ENST00000466373 FAM50AQ14320 339 aaKnown RBP15.28■□□□□ 0.04
UFD1-206ENST00000466373 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.04
UFD1-206ENST00000466373 CLSPNQ9HAW4 1339 aa15.27■□□□□ 0.03
UFD1-206ENST00000466373 ABCA10Q8WWZ4 1543 aa15.26■□□□□ 0.03
UFD1-206ENST00000466373 LRRC9Q6ZRR7 1453 aa15.25■□□□□ 0.03
UFD1-206ENST00000466373 PHLDB1Q86UU1 1377 aa15.25■□□□□ 0.03
UFD1-206ENST00000466373 TDRD9Q8NDG6 1382 aaKnown RBP15.23■□□□□ 0.03
UFD1-206ENST00000466373 RAB3GAP2Q9H2M9 1393 aa15.23■□□□□ 0.03
UFD1-206ENST00000466373 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
UFD1-206ENST00000466373 PCF11O94913 1555 aaKnown RBP15.23■□□□□ 0.03
UFD1-206ENST00000466373 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
UFD1-206ENST00000466373 MAP3K1Q13233 1512 aa15.19■□□□□ 0.02
UFD1-206ENST00000466373 LAMC3Q9Y6N6 1575 aa15.15■□□□□ 0.02
UFD1-206ENST00000466373 SETD5Q9C0A6 1442 aa15.15■□□□□ 0.02
UFD1-206ENST00000466373 CUL7Q14999 1698 aa15.14■□□□□ 0.01
UFD1-206ENST00000466373 CFAP43Q8NDM7 1665 aa15.13■□□□□ 0.01
UFD1-206ENST00000466373 SIN3AQ96ST3 1273 aa15.12■□□□□ 0.01
UFD1-206ENST00000466373 CTTNBP2Q8WZ74 1663 aa15.12■□□□□ 0.01
UFD1-206ENST00000466373 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
UFD1-206ENST00000466373 FYCO1Q9BQS8 1478 aa15.11■□□□□ 0.01
UFD1-206ENST00000466373 CASKIN1Q8WXD9 1431 aa15.11■□□□□ 0.01
UFD1-206ENST00000466373 PDS5BQ9NTI5 1447 aa15.11■□□□□ 0.01
UFD1-206ENST00000466373 EFCAB5A4FU69 1503 aa15.11■□□□□ 0.01
UFD1-206ENST00000466373 MAPKBP1O60336 1514 aa15.11■□□□□ 0.01
UFD1-206ENST00000466373 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
UFD1-206ENST00000466373 KIF21AQ7Z4S6 1674 aa15.07■□□□□ 0
UFD1-206ENST00000466373 FMN1Q68DA7 1419 aa15.07■□□□□ 0
UFD1-206ENST00000466373 MTUS2Q5JR59 1369 aa15.07■□□□□ 0
UFD1-206ENST00000466373 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
UFD1-206ENST00000466373 AQRO60306 1485 aaKnown RBP eCLIP15.04■□□□□ -02e-7■■■■■ 31.2
UFD1-206ENST00000466373 SNAPC4Q5SXM2 1469 aa15.04■□□□□ -0
UFD1-206ENST00000466373 ARID3CA6NKF2 412 aa15.01□□□□□ -0.01
UFD1-206ENST00000466373 FGD6Q6ZV73 1430 aa15.01□□□□□ -0.01
UFD1-206ENST00000466373 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
UFD1-206ENST00000466373 HIRIP3Q9BW71 556 aaPredicted RBP14.99□□□□□ -0.01
UFD1-206ENST00000466373 SAMD9Q5K651 1589 aa14.98□□□□□ -0.01
UFD1-206ENST00000466373 LRRIQ1Q96JM4 1722 aa14.98□□□□□ -0.01
UFD1-206ENST00000466373 TARBP1Q13395 1621 aaKnown RBP14.97□□□□□ -0.01
UFD1-206ENST00000466373 PTPRKQ15262 1439 aa14.97□□□□□ -0.01
UFD1-206ENST00000466373 NCOA2Q15596 1464 aa14.96□□□□□ -0.02
UFD1-206ENST00000466373 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
UFD1-206ENST00000466373 KCNH8Q96L42 1107 aa14.95□□□□□ -0.02
UFD1-206ENST00000466373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.94□□□□□ -0.022e-7■□□□□ 9.2
UFD1-206ENST00000466373 DDX10Q13206 875 aaKnown RBP14.94□□□□□ -0.02
UFD1-206ENST00000466373 CHIC2Q9UKJ5 165 aa14.93□□□□□ -0.02
UFD1-206ENST00000466373 CCDC18Q5T9S5 1454 aa14.92□□□□□ -0.02
UFD1-206ENST00000466373 MYOM3Q5VTT5 1437 aa14.92□□□□□ -0.02
UFD1-206ENST00000466373 RRP7BPQ9NSQ0 103 aa14.91□□□□□ -0.02
UFD1-206ENST00000466373 PBRM1Q86U86 1689 aa14.89□□□□□ -0.03
UFD1-206ENST00000466373 PPP1R15AO75807 674 aaPredicted RBP14.89□□□□□ -0.03
UFD1-206ENST00000466373 MAGI3Q5TCQ9 1506 aa14.89□□□□□ -0.03
UFD1-206ENST00000466373 SUPT6HQ7KZ85 1726 aaKnown RBP14.88□□□□□ -0.03
UFD1-206ENST00000466373 HFM1A2PYH4 1435 aa14.88□□□□□ -0.03
UFD1-206ENST00000466373 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
UFD1-206ENST00000466373 TONSLQ96HA7 1378 aa14.87□□□□□ -0.03
UFD1-206ENST00000466373 MRC2Q9UBG0 1479 aa14.87□□□□□ -0.03
UFD1-206ENST00000466373 EHBP1L1Q8N3D4 1523 aa14.86□□□□□ -0.03
UFD1-206ENST00000466373 NAIPQ13075 1403 aa14.86□□□□□ -0.03
UFD1-206ENST00000466373 IQGAP2Q13576 1575 aa14.86□□□□□ -0.03
UFD1-206ENST00000466373 PTPN23Q9H3S7 1636 aa14.86□□□□□ -0.03
UFD1-206ENST00000466373 TIMELESSQ9UNS1 1208 aa14.85□□□□□ -0.03
UFD1-206ENST00000466373 CDK13Q14004 1512 aaKnown RBP14.85□□□□□ -0.03
UFD1-206ENST00000466373 ADAMTS12P58397 1594 aa14.84□□□□□ -0.03
UFD1-206ENST00000466373 UACAQ9BZF9 1416 aa14.84□□□□□ -0.03
UFD1-206ENST00000466373 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
UFD1-206ENST00000466373 UGGT2Q9NYU1 1516 aa14.84□□□□□ -0.03
UFD1-206ENST00000466373 TRIM52Q96A61 297 aa14.83□□□□□ -0.04
UFD1-206ENST00000466373 EPRSP07814 1512 aaKnown RBP14.83□□□□□ -0.04
UFD1-206ENST00000466373 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
UFD1-206ENST00000466373 ARHGEF11O15085 1522 aa14.79□□□□□ -0.04
UFD1-206ENST00000466373 FBLN2P98095 1184 aa14.77□□□□□ -0.05
UFD1-206ENST00000466373 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
UFD1-206ENST00000466373 FOXD1Q16676 465 aa14.76□□□□□ -0.05
UFD1-206ENST00000466373 WDR62O43379 1518 aa14.76□□□□□ -0.05
UFD1-206ENST00000466373 SUPT16HQ9Y5B9 1047 aaKnown RBP14.75□□□□□ -0.05
UFD1-206ENST00000466373 ZNF644Q9H582 1327 aaPredicted RBP14.74□□□□□ -0.05
UFD1-206ENST00000466373 KDM6BO15054 1643 aa14.74□□□□□ -0.05
UFD1-206ENST00000466373 TCOF1Q13428 1488 aaKnown RBP14.73□□□□□ -0.05
UFD1-206ENST00000466373 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
UFD1-206ENST00000466373 ANP32CO43423 234 aa14.72□□□□□ -0.05
UFD1-206ENST00000466373 DISP1Q96F81 1524 aa14.72□□□□□ -0.05
UFD1-206ENST00000466373 CHMP7Q8WUX9 453 aaPredicted RBP14.72□□□□□ -0.05
UFD1-206ENST00000466373 KIAA0586Q9BVV6 1533 aa14.71□□□□□ -0.05
UFD1-206ENST00000466373 MPHOSPH9Q99550 1183 aa14.71□□□□□ -0.06
UFD1-206ENST00000466373 EIF4G3O43432 1585 aaKnown RBP14.7□□□□□ -0.06
UFD1-206ENST00000466373 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
UFD1-206ENST00000466373 KIAA0556O60303 1618 aa14.69□□□□□ -0.06
UFD1-206ENST00000466373 DENND4BO75064 1496 aaPredicted RBP14.69□□□□□ -0.06
UFD1-206ENST00000466373 MIA2Q96PC5 1412 aa14.69□□□□□ -0.06
UFD1-206ENST00000466373 NUP153P49790 1475 aaKnown RBP14.68□□□□□ -0.06
UFD1-206ENST00000466373 GCC2Q8IWJ2 1684 aa14.67□□□□□ -0.06
UFD1-206ENST00000466373 KDM5BQ9UGL1 1544 aa14.66□□□□□ -0.06
UFD1-206ENST00000466373 ZNF777Q9ULD5 760 aaPredicted RBP14.66□□□□□ -0.06
UFD1-206ENST00000466373 CDK11AQ9UQ88 783 aaPredicted RBP14.66□□□□□ -0.06
UFD1-206ENST00000466373 L3MBTL2Q969R5 705 aa14.65□□□□□ -0.06
UFD1-206ENST00000466373 DAPK1P53355 1430 aa14.65□□□□□ -0.06
UFD1-206ENST00000466373 PRG4Q92954 1404 aaPredicted RBP14.65□□□□□ -0.06
UFD1-206ENST00000466373 HSPA5P11021 654 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms