RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 KIAA0586Q9BVV6 1533 aa30.47■■■□□ 2.47
SCAMP3-204ENST00000465312 RIMBP3CA6NJZ7 1639 aa30.46■■■□□ 2.47
SCAMP3-204ENST00000465312 RIMBP3BA6NNM3 1639 aa30.46■■■□□ 2.47
SCAMP3-204ENST00000465312 RIMBP3Q9UFD9 1639 aa30.46■■■□□ 2.47
SCAMP3-204ENST00000465312 KIF21BO75037 1637 aa30.42■■■□□ 2.46
SCAMP3-204ENST00000465312 CTTNBP2Q8WZ74 1663 aa30.41■■■□□ 2.46
SCAMP3-204ENST00000465312 IQGAP2Q13576 1575 aa30.4■■■□□ 2.46
SCAMP3-204ENST00000465312 JPH4Q96JJ6 628 aa30.39■■■□□ 2.46
SCAMP3-204ENST00000465312 SHROOM2Q13796 1616 aa30.38■■■□□ 2.45
SCAMP3-204ENST00000465312 PRG4Q92954 1404 aaPredicted RBP30.34■■■□□ 2.45
SCAMP3-204ENST00000465312 GOLGA3Q08378 1498 aa30.31■■■□□ 2.44
SCAMP3-204ENST00000465312 ERCC6L2Q5T890 1561 aa30.3■■■□□ 2.44
SCAMP3-204ENST00000465312 UBTFP17480 764 aaKnown RBP30.3■■■□□ 2.44
SCAMP3-204ENST00000465312 CYB5RLQ6IPT4 315 aa30.24■■■□□ 2.43
SCAMP3-204ENST00000465312 ARAP1Q96P48 1450 aa30.24■■■□□ 2.43
SCAMP3-204ENST00000465312 RANGAP1P46060 587 aaPredicted RBP30.23■■■□□ 2.43
SCAMP3-204ENST00000465312 CARMIL2Q6F5E8 1435 aa30.22■■■□□ 2.43
SCAMP3-204ENST00000465312 TTBK1Q5TCY1 1321 aaPredicted RBP30.2■■■□□ 2.42
SCAMP3-204ENST00000465312 UGGT2Q9NYU1 1516 aa30.17■■■□□ 2.42
SCAMP3-204ENST00000465312 KIAA0556O60303 1618 aa30.1■■■□□ 2.41
SCAMP3-204ENST00000465312 DISP1Q96F81 1524 aa30.09■■■□□ 2.41
SCAMP3-204ENST00000465312 TNIKQ9UKE5 1360 aa30.05■■■□□ 2.4
SCAMP3-204ENST00000465312 P3H3Q8IVL6 736 aa30.04■■■□□ 2.4
SCAMP3-204ENST00000465312 PTPRGP23470 1445 aa30.02■■■□□ 2.4
SCAMP3-204ENST00000465312 SAMD9Q5K651 1589 aa29.95■■■□□ 2.39
SCAMP3-204ENST00000465312 EFCAB5A4FU69 1503 aa29.92■■■□□ 2.38
SCAMP3-204ENST00000465312 LOC105371045A0A1W2PR82 267 aa29.92■■■□□ 2.38
SCAMP3-204ENST00000465312 FHOD3Q2V2M9 1422 aa29.88■■■□□ 2.37
SCAMP3-204ENST00000465312 NPM1P06748 294 aaKnown RBP eCLIP29.82■■■□□ 2.36
SCAMP3-204ENST00000465312 ADCY10Q96PN6 1610 aa29.82■■■□□ 2.36
SCAMP3-204ENST00000465312 UACAQ9BZF9 1416 aa29.8■■■□□ 2.36
SCAMP3-204ENST00000465312 ARHGAP35Q9NRY4 1499 aa29.8■■■□□ 2.36
SCAMP3-204ENST00000465312 CLIP1P30622 1438 aa29.79■■■□□ 2.36
SCAMP3-204ENST00000465312 PLB1Q6P1J6 1458 aa29.77■■■□□ 2.36
SCAMP3-204ENST00000465312 ABCC2Q92887 1545 aa29.75■■■□□ 2.35
SCAMP3-204ENST00000465312 CEP162Q5TB80 1403 aa29.72■■■□□ 2.35
SCAMP3-204ENST00000465312 UHRF1BP1LA0JNW5 1464 aa29.7■■■□□ 2.35
SCAMP3-204ENST00000465312 ABCA8O94911 1581 aa29.69■■■□□ 2.34
SCAMP3-204ENST00000465312 RAPGEF6Q8TEU7 1601 aa29.67■■■□□ 2.34
SCAMP3-204ENST00000465312 ARID3CA6NKF2 412 aa29.67■■■□□ 2.34
SCAMP3-204ENST00000465312 ATP1B4Q9UN42 357 aaPredicted RBP29.66■■■□□ 2.34
SCAMP3-204ENST00000465312 FMN1Q68DA7 1419 aa29.65■■■□□ 2.34
SCAMP3-204ENST00000465312 TRHP20396 242 aaPredicted RBP29.63■■■□□ 2.33
SCAMP3-204ENST00000465312 ZCCHC11Q5TAX3 1644 aaKnown RBP29.6■■■□□ 2.33
SCAMP3-204ENST00000465312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.59■■■□□ 2.33
SCAMP3-204ENST00000465312 HNRNPUL2Q1KMD3 747 aaKnown RBP29.59■■■□□ 2.33
SCAMP3-204ENST00000465312 KDM5BQ9UGL1 1544 aa29.56■■■□□ 2.32
SCAMP3-204ENST00000465312 MAPKBP1O60336 1514 aa29.53■■■□□ 2.32
SCAMP3-204ENST00000465312 HECW1Q76N89 1606 aa29.53■■■□□ 2.32
SCAMP3-204ENST00000465312 NUP153P49790 1475 aaKnown RBP29.51■■■□□ 2.31
SCAMP3-204ENST00000465312 PCF11O94913 1555 aaKnown RBP29.49■■■□□ 2.31
SCAMP3-204ENST00000465312 ASXL2Q76L83 1435 aa29.48■■■□□ 2.31
SCAMP3-204ENST00000465312 ATP10BO94823 1461 aa29.46■■■□□ 2.31
SCAMP3-204ENST00000465312 CASKIN1Q8WXD9 1431 aa29.42■■■□□ 2.3
SCAMP3-204ENST00000465312 CDK13Q14004 1512 aaKnown RBP29.4■■■□□ 2.3
SCAMP3-204ENST00000465312 FYCO1Q9BQS8 1478 aa29.4■■■□□ 2.3
SCAMP3-204ENST00000465312 FAM69CQ0P6D2 419 aa29.39■■■□□ 2.3
SCAMP3-204ENST00000465312 WDR7Q9Y4E6 1490 aa29.39■■■□□ 2.3
SCAMP3-204ENST00000465312 EPRSP07814 1512 aaKnown RBP29.37■■■□□ 2.29
SCAMP3-204ENST00000465312 ABCC10Q5T3U5 1492 aa29.36■■■□□ 2.29
SCAMP3-204ENST00000465312 KCNH8Q96L42 1107 aa29.36■■■□□ 2.29
SCAMP3-204ENST00000465312 DIP2BQ9P265 1576 aa29.35■■■□□ 2.29
SCAMP3-204ENST00000465312 KIF13AQ9H1H9 1805 aa29.34■■■□□ 2.29
SCAMP3-204ENST00000465312 PLEKHD1A6NEE1 506 aa29.33■■■□□ 2.29
SCAMP3-204ENST00000465312 CCDC18Q5T9S5 1454 aa29.32■■■□□ 2.28
SCAMP3-204ENST00000465312 LRRIQ1Q96JM4 1722 aa29.31■■■□□ 2.28
SCAMP3-204ENST00000465312 VPS8Q8N3P4 1428 aa29.31■■■□□ 2.28
SCAMP3-204ENST00000465312 CDK11AQ9UQ88 783 aaPredicted RBP29.29■■■□□ 2.28
SCAMP3-204ENST00000465312 TSPOAP1O95153 1857 aa29.22■■■□□ 2.27
SCAMP3-204ENST00000465312 GLI2P10070 1586 aa29.2■■■□□ 2.26
SCAMP3-204ENST00000465312 APLP2Q06481 763 aa29.14■■■□□ 2.26
SCAMP3-204ENST00000465312 TROQ12816 1431 aaPredicted RBP29.13■■■□□ 2.25
SCAMP3-204ENST00000465312 CFAP43Q8NDM7 1665 aa29.12■■■□□ 2.25
SCAMP3-204ENST00000465312 KIF14Q15058 1648 aa29.12■■■□□ 2.25
SCAMP3-204ENST00000465312 MAP3K4Q9Y6R4 1608 aa29.12■■■□□ 2.25
SCAMP3-204ENST00000465312 MTUS2Q5JR59 1369 aa29.11■■■□□ 2.25
SCAMP3-204ENST00000465312 CD109Q6YHK3 1445 aa29.1■■■□□ 2.25
SCAMP3-204ENST00000465312 ABCA9Q8IUA7 1624 aa29.09■■■□□ 2.25
SCAMP3-204ENST00000465312 TIAM1Q13009 1591 aa29.07■■■□□ 2.24
SCAMP3-204ENST00000465312 MAGI3Q5TCQ9 1506 aa29.07■■■□□ 2.24
SCAMP3-204ENST00000465312 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.04■■■□□ 2.24
SCAMP3-204ENST00000465312 TTC37Q6PGP7 1564 aa29.03■■■□□ 2.24
SCAMP3-204ENST00000465312 EHBP1L1Q8N3D4 1523 aa29.02■■■□□ 2.24
SCAMP3-204ENST00000465312 TEX14Q8IWB6 1497 aa29.02■■■□□ 2.24
SCAMP3-204ENST00000465312 PPRC1Q5VV67 1664 aaKnown RBP29■■■□□ 2.23
SCAMP3-204ENST00000465312 MYO5CQ9NQX4 1742 aa28.95■■■□□ 2.23
SCAMP3-204ENST00000465312 MAP3K1Q13233 1512 aa28.94■■■□□ 2.22
SCAMP3-204ENST00000465312 LRRC9Q6ZRR7 1453 aa28.91■■■□□ 2.22
SCAMP3-204ENST00000465312 SUPT6HQ7KZ85 1726 aaKnown RBP28.9■■■□□ 2.22
SCAMP3-204ENST00000465312 KDM6BO15054 1643 aa28.88■■■□□ 2.21
SCAMP3-204ENST00000465312 KANK4Q5T7N3 995 aaPredicted RBP28.88■■■□□ 2.21
SCAMP3-204ENST00000465312 ARHGAP5Q13017 1502 aa28.88■■■□□ 2.21
SCAMP3-204ENST00000465312 CCNB3Q8WWL7 1395 aa28.87■■■□□ 2.21
SCAMP3-204ENST00000465312 FANCAO15360 1455 aa28.86■■■□□ 2.21
SCAMP3-204ENST00000465312 CFAP74Q9C0B2 1584 aa28.86■■■□□ 2.21
SCAMP3-204ENST00000465312 PLCH2O75038 1416 aa28.86■■■□□ 2.21
SCAMP3-204ENST00000465312 PREX2Q70Z35 1606 aa28.83■■■□□ 2.21
SCAMP3-204ENST00000465312 NCOA2Q15596 1464 aa28.82■■■□□ 2.2
SCAMP3-204ENST00000465312 CDC42BPAQ5VT25 1732 aa28.81■■■□□ 2.2
SCAMP3-204ENST00000465312 NEO1Q92859 1461 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms