RNA–Protein interactions for RNA: ENST00000465309.6

LMO7-208, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-208ENST00000465309 DIP2BQ9P265 1576 aa12.54□□□□□ -0.4
LMO7-208ENST00000465309 CEP170Q5SW79 1584 aa12.48□□□□□ -0.41
LMO7-208ENST00000465309 SPATA31D1Q6ZQQ2 1576 aa12.47□□□□□ -0.41
LMO7-208ENST00000465309 GRIN2BQ13224 1484 aa12.46□□□□□ -0.41
LMO7-208ENST00000465309 SOGA1O94964 1423 aa12.46□□□□□ -0.41
LMO7-208ENST00000465309 NPM1P06748 294 aaKnown RBP eCLIP12.44□□□□□ -0.42
LMO7-208ENST00000465309 WDR97A6NE52 1622 aa12.44□□□□□ -0.42
LMO7-208ENST00000465309 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
LMO7-208ENST00000465309 PBRM1Q86U86 1689 aa12.43□□□□□ -0.42
LMO7-208ENST00000465309 MAPKBP1O60336 1514 aa12.42□□□□□ -0.42
LMO7-208ENST00000465309 TOP2BQ02880 1626 aa12.36□□□□□ -0.43
LMO7-208ENST00000465309 SHROOM2Q13796 1616 aa12.36□□□□□ -0.43
LMO7-208ENST00000465309 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
LMO7-208ENST00000465309 GRIN2AQ12879 1464 aa12.32□□□□□ -0.44
LMO7-208ENST00000465309 ADCY10Q96PN6 1610 aa12.31□□□□□ -0.44
LMO7-208ENST00000465309 PRG4Q92954 1404 aaPredicted RBP12.3□□□□□ -0.44
LMO7-208ENST00000465309 PPRC1Q5VV67 1664 aaKnown RBP12.3□□□□□ -0.44
LMO7-208ENST00000465309 CCDC88BA6NC98 1476 aa12.3□□□□□ -0.44
LMO7-208ENST00000465309 CERKQ8TCT0 537 aa12.29□□□□□ -0.44
LMO7-208ENST00000465309 NUP160Q12769 1436 aa12.27□□□□□ -0.45
LMO7-208ENST00000465309 COL17A1Q9UMD9 1497 aaPredicted RBP12.26□□□□□ -0.45
LMO7-208ENST00000465309 ADAMTS12P58397 1594 aa12.21□□□□□ -0.46
LMO7-208ENST00000465309 ABCA5Q8WWZ7 1642 aa12.2□□□□□ -0.46
LMO7-208ENST00000465309 PCF11O94913 1555 aaKnown RBP12.2□□□□□ -0.46
LMO7-208ENST00000465309 KIF21BO75037 1637 aa12.19□□□□□ -0.46
LMO7-208ENST00000465309 CUX1P39880 1505 aa12.16□□□□□ -0.46
LMO7-208ENST00000465309 JPH4Q96JJ6 628 aa12.16□□□□□ -0.46
LMO7-208ENST00000465309 PTPRMP28827 1452 aa12.15□□□□□ -0.46
LMO7-208ENST00000465309 HSPA2P54652 639 aa12.13□□□□□ -0.47
LMO7-208ENST00000465309 GLI2P10070 1586 aa12.13□□□□□ -0.47
LMO7-208ENST00000465309 TEX14Q8IWB6 1497 aa12.11□□□□□ -0.47
LMO7-208ENST00000465309 ASXL2Q76L83 1435 aa12.11□□□□□ -0.47
LMO7-208ENST00000465309 ABCA10Q8WWZ4 1543 aa12.09□□□□□ -0.47
LMO7-208ENST00000465309 TTBK1Q5TCY1 1321 aaPredicted RBP12.09□□□□□ -0.47
LMO7-208ENST00000465309 MAP3K4Q9Y6R4 1608 aa12.08□□□□□ -0.48
LMO7-208ENST00000465309 FHAD1B1AJZ9 1412 aa12.08□□□□□ -0.48
LMO7-208ENST00000465309 PLB1Q6P1J6 1458 aa12.07□□□□□ -0.48
LMO7-208ENST00000465309 RUSC2Q8N2Y8 1516 aa12.06□□□□□ -0.48
LMO7-208ENST00000465309 ADAMTSL3P82987 1691 aa12.05□□□□□ -0.48
LMO7-208ENST00000465309 CUL7Q14999 1698 aa12.05□□□□□ -0.48
LMO7-208ENST00000465309 ABCC2Q92887 1545 aa12.01□□□□□ -0.49
LMO7-208ENST00000465309 MADDQ8WXG6 1647 aa12.01□□□□□ -0.49
LMO7-208ENST00000465309 EPRSP07814 1512 aaKnown RBP12.01□□□□□ -0.49
LMO7-208ENST00000465309 RIMS1Q86UR5 1692 aaKnown RBP11.97□□□□□ -0.49
LMO7-208ENST00000465309 KIAA0586Q9BVV6 1533 aa11.97□□□□□ -0.49
LMO7-208ENST00000465309 PTPRGP23470 1445 aa11.95□□□□□ -0.5
LMO7-208ENST00000465309 BCORL1Q5H9F3 1711 aa11.94□□□□□ -0.5
LMO7-208ENST00000465309 ARID4BQ4LE39 1312 aaPredicted RBP11.93□□□□□ -0.5
LMO7-208ENST00000465309 ERICH3Q5RHP9 1530 aa11.92□□□□□ -0.5
LMO7-208ENST00000465309 MED1Q15648 1581 aaPredicted RBP11.91□□□□□ -0.5
LMO7-208ENST00000465309 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
LMO7-208ENST00000465309 ZCCHC11Q5TAX3 1644 aaKnown RBP11.86□□□□□ -0.51
LMO7-208ENST00000465309 CD109Q6YHK3 1445 aa11.85□□□□□ -0.51
LMO7-208ENST00000465309 CFAP43Q8NDM7 1665 aa11.84□□□□□ -0.51
LMO7-208ENST00000465309 TNIKQ9UKE5 1360 aa11.83□□□□□ -0.52
LMO7-208ENST00000465309 STRCQ7RTU9 1775 aa11.83□□□□□ -0.52
LMO7-208ENST00000465309 MAGI3Q5TCQ9 1506 aa11.83□□□□□ -0.52
LMO7-208ENST00000465309 DMRT2Q9Y5R5 561 aa11.83□□□□□ -0.52
LMO7-208ENST00000465309 UHRF1BP1LA0JNW5 1464 aa11.83□□□□□ -0.52
LMO7-208ENST00000465309 UACAQ9BZF9 1416 aa11.82□□□□□ -0.52
LMO7-208ENST00000465309 YEATS2Q9ULM3 1422 aa11.81□□□□□ -0.52
LMO7-208ENST00000465309 WDR7Q9Y4E6 1490 aa11.81□□□□□ -0.52
LMO7-208ENST00000465309 KDM5BQ9UGL1 1544 aa11.81□□□□□ -0.52
LMO7-208ENST00000465309 UBAP1LF5GYI3 381 aa11.8□□□□□ -0.52
LMO7-208ENST00000465309 KCNH8Q96L42 1107 aa11.79□□□□□ -0.52
LMO7-208ENST00000465309 CARMIL2Q6F5E8 1435 aa11.78□□□□□ -0.52
LMO7-208ENST00000465309 IQSEC2Q5JU85 1478 aa11.78□□□□□ -0.52
LMO7-208ENST00000465309 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
LMO7-208ENST00000465309 LTBP4Q8N2S1 1624 aa11.77□□□□□ -0.53
LMO7-208ENST00000465309 ARAP3Q8WWN8 1544 aa11.76□□□□□ -0.53
LMO7-208ENST00000465309 RAPGEF3O95398 923 aa11.75□□□□□ -0.53
LMO7-208ENST00000465309 EHMT2Q96KQ7 1210 aa11.74□□□□□ -0.53
LMO7-208ENST00000465309 SCAF1Q9H7N4 1312 aaKnown RBP11.74□□□□□ -0.53
LMO7-208ENST00000465309 FER1L4A9Z1Z3 1794 aa11.73□□□□□ -0.53
LMO7-208ENST00000465309 HSPA1LP34931 641 aa11.71□□□□□ -0.53
LMO7-208ENST00000465309 PTPRTO14522 1441 aa11.7□□□□□ -0.54
LMO7-208ENST00000465309 MLECQ14165 292 aa11.7□□□□□ -0.54
LMO7-208ENST00000465309 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
LMO7-208ENST00000465309 ARHGEF40Q8TER5 1519 aa11.69□□□□□ -0.54
LMO7-208ENST00000465309 TTC37Q6PGP7 1564 aa11.68□□□□□ -0.54
LMO7-208ENST00000465309 POGZQ7Z3K3 1410 aa11.68□□□□□ -0.54
LMO7-208ENST00000465309 FRMPD1Q5SYB0 1578 aa11.67□□□□□ -0.54
LMO7-208ENST00000465309 MAPK8IP2Q13387 824 aaPredicted RBP11.67□□□□□ -0.54
LMO7-208ENST00000465309 FANCAO15360 1455 aa11.66□□□□□ -0.54
LMO7-208ENST00000465309 PIP4K2BP78356 416 aa11.66□□□□□ -0.54
LMO7-208ENST00000465309 UHRF1BP1Q6BDS2 1440 aa11.65□□□□□ -0.54
LMO7-208ENST00000465309 SIGLEC1Q9BZZ2 1709 aa11.64□□□□□ -0.55
LMO7-208ENST00000465309 CEBPAP49715 358 aaPredicted RBP11.64□□□□□ -0.55
LMO7-208ENST00000465309 IQGAP2Q13576 1575 aa11.63□□□□□ -0.55
LMO7-208ENST00000465309 DISP1Q96F81 1524 aa11.62□□□□□ -0.55
LMO7-208ENST00000465309 ZNF335Q9H4Z2 1342 aaPredicted RBP11.6□□□□□ -0.55
LMO7-208ENST00000465309 PHLDB1Q86UU1 1377 aa11.59□□□□□ -0.55
LMO7-208ENST00000465309 AKNAQ7Z591 1439 aa11.58□□□□□ -0.56
LMO7-208ENST00000465309 SETD1AO15047 1707 aaKnown RBP11.57□□□□□ -0.56
LMO7-208ENST00000465309 NEO1Q92859 1461 aa11.56□□□□□ -0.56
LMO7-208ENST00000465309 KIAA0556O60303 1618 aa11.54□□□□□ -0.56
LMO7-208ENST00000465309 RICTORQ6R327 1708 aa11.54□□□□□ -0.56
LMO7-208ENST00000465309 SETD1BQ9UPS6 1966 aaKnown RBP11.54□□□□□ -0.56
LMO7-208ENST00000465309 ABCA9Q8IUA7 1624 aa11.53□□□□□ -0.56
LMO7-208ENST00000465309 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms