RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 ARHGEF11O15085 1522 aa21.61■■□□□ 1.05
ERGIC3-212ENST00000465298 KIF21BO75037 1637 aa21.57■■□□□ 1.04
ERGIC3-212ENST00000465298 CARMIL2Q6F5E8 1435 aa21.55■■□□□ 1.04
ERGIC3-212ENST00000465298 SHROOM2Q13796 1616 aa21.55■■□□□ 1.04
ERGIC3-212ENST00000465298 IQGAP2Q13576 1575 aa21.55■■□□□ 1.04
ERGIC3-212ENST00000465298 PRG4Q92954 1404 aaPredicted RBP21.55■■□□□ 1.04
ERGIC3-212ENST00000465298 GOLGA3Q08378 1498 aa21.52■■□□□ 1.04
ERGIC3-212ENST00000465298 RIMBP3CA6NJZ7 1639 aa21.52■■□□□ 1.04
ERGIC3-212ENST00000465298 RIMBP3BA6NNM3 1639 aa21.52■■□□□ 1.04
ERGIC3-212ENST00000465298 RIMBP3Q9UFD9 1639 aa21.52■■□□□ 1.04
ERGIC3-212ENST00000465298 UBTFP17480 764 aaKnown RBP21.49■■□□□ 1.03
ERGIC3-212ENST00000465298 UGGT2Q9NYU1 1516 aa21.46■■□□□ 1.03
ERGIC3-212ENST00000465298 CYB5RLQ6IPT4 315 aa21.46■■□□□ 1.03
ERGIC3-212ENST00000465298 CTTNBP2Q8WZ74 1663 aa21.46■■□□□ 1.03
ERGIC3-212ENST00000465298 ARAP1Q96P48 1450 aa21.41■■□□□ 1.02
ERGIC3-212ENST00000465298 TNIKQ9UKE5 1360 aa21.41■■□□□ 1.02
ERGIC3-212ENST00000465298 PTPRGP23470 1445 aa21.37■■□□□ 1.01
ERGIC3-212ENST00000465298 DISP1Q96F81 1524 aa21.34■■□□□ 1.01
ERGIC3-212ENST00000465298 ERCC6L2Q5T890 1561 aa21.33■■□□□ 1.01
ERGIC3-212ENST00000465298 KIAA0556O60303 1618 aa21.31■■□□□ 1
ERGIC3-212ENST00000465298 EFCAB5A4FU69 1503 aa21.29■■□□□ 1
ERGIC3-212ENST00000465298 NPM1P06748 294 aaKnown RBP eCLIP21.29■■□□□ 1
ERGIC3-212ENST00000465298 EHMT2Q96KQ7 1210 aa21.29■■□□□ 1
ERGIC3-212ENST00000465298 SAMD9Q5K651 1589 aa21.23■□□□□ 0.99
ERGIC3-212ENST00000465298 UACAQ9BZF9 1416 aa21.22■□□□□ 0.99
ERGIC3-212ENST00000465298 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
ERGIC3-212ENST00000465298 TTBK1Q5TCY1 1321 aaPredicted RBP21.21■□□□□ 0.99
ERGIC3-212ENST00000465298 UHRF1BP1LA0JNW5 1464 aa21.2■□□□□ 0.98
ERGIC3-212ENST00000465298 P3H3Q8IVL6 736 aa21.18■□□□□ 0.98
ERGIC3-212ENST00000465298 FMN1Q68DA7 1419 aa21.16■□□□□ 0.98
ERGIC3-212ENST00000465298 CLIP1P30622 1438 aa21.13■□□□□ 0.97
ERGIC3-212ENST00000465298 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
ERGIC3-212ENST00000465298 ARHGAP35Q9NRY4 1499 aa21.11■□□□□ 0.97
ERGIC3-212ENST00000465298 FHOD3Q2V2M9 1422 aa21.11■□□□□ 0.97
ERGIC3-212ENST00000465298 LOC105371045A0A1W2PR82 267 aa21.08■□□□□ 0.97
ERGIC3-212ENST00000465298 ADCY10Q96PN6 1610 aa21.07■□□□□ 0.96
ERGIC3-212ENST00000465298 PLB1Q6P1J6 1458 aa21.07■□□□□ 0.96
ERGIC3-212ENST00000465298 ABCA8O94911 1581 aa21.06■□□□□ 0.96
ERGIC3-212ENST00000465298 KDM5BQ9UGL1 1544 aa21.06■□□□□ 0.96
ERGIC3-212ENST00000465298 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
ERGIC3-212ENST00000465298 MAPKBP1O60336 1514 aa21.04■□□□□ 0.96
ERGIC3-212ENST00000465298 RAPGEF6Q8TEU7 1601 aa21■□□□□ 0.95
ERGIC3-212ENST00000465298 TRHP20396 242 aaPredicted RBP21■□□□□ 0.95
ERGIC3-212ENST00000465298 CDK11AQ9UQ88 783 aaPredicted RBP20.98■□□□□ 0.95
ERGIC3-212ENST00000465298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.97■□□□□ 0.95
ERGIC3-212ENST00000465298 HNRNPUL2Q1KMD3 747 aaKnown RBP20.97■□□□□ 0.95
ERGIC3-212ENST00000465298 ATP1B4Q9UN42 357 aaPredicted RBP20.94■□□□□ 0.94
ERGIC3-212ENST00000465298 ASXL2Q76L83 1435 aa20.94■□□□□ 0.94
ERGIC3-212ENST00000465298 CASKIN1Q8WXD9 1431 aa20.94■□□□□ 0.94
ERGIC3-212ENST00000465298 NUP153P49790 1475 aaKnown RBP20.93■□□□□ 0.94
ERGIC3-212ENST00000465298 PLEKHD1A6NEE1 506 aa20.92■□□□□ 0.94
ERGIC3-212ENST00000465298 ATP10BO94823 1461 aa20.92■□□□□ 0.94
ERGIC3-212ENST00000465298 HECW1Q76N89 1606 aa20.92■□□□□ 0.94
ERGIC3-212ENST00000465298 ABCC10Q5T3U5 1492 aa20.91■□□□□ 0.94
ERGIC3-212ENST00000465298 ZCCHC11Q5TAX3 1644 aaKnown RBP20.9■□□□□ 0.94
ERGIC3-212ENST00000465298 FYCO1Q9BQS8 1478 aa20.89■□□□□ 0.94
ERGIC3-212ENST00000465298 WDR7Q9Y4E6 1490 aa20.89■□□□□ 0.94
ERGIC3-212ENST00000465298 CCDC18Q5T9S5 1454 aa20.88■□□□□ 0.93
ERGIC3-212ENST00000465298 FAM69CQ0P6D2 419 aa20.88■□□□□ 0.93
ERGIC3-212ENST00000465298 EPRSP07814 1512 aaKnown RBP20.85■□□□□ 0.93
ERGIC3-212ENST00000465298 ARID3CA6NKF2 412 aa20.84■□□□□ 0.93
ERGIC3-212ENST00000465298 VPS8Q8N3P4 1428 aa20.82■□□□□ 0.92
ERGIC3-212ENST00000465298 GLI2P10070 1586 aa20.8■□□□□ 0.92
ERGIC3-212ENST00000465298 KCNH8Q96L42 1107 aa20.79■□□□□ 0.92
ERGIC3-212ENST00000465298 DIP2BQ9P265 1576 aa20.79■□□□□ 0.92
ERGIC3-212ENST00000465298 PCF11O94913 1555 aaKnown RBP20.78■□□□□ 0.92
ERGIC3-212ENST00000465298 APLP2Q06481 763 aa20.78■□□□□ 0.92
ERGIC3-212ENST00000465298 CDK13Q14004 1512 aaKnown RBP20.73■□□□□ 0.91
ERGIC3-212ENST00000465298 TROQ12816 1431 aaPredicted RBP20.72■□□□□ 0.91
ERGIC3-212ENST00000465298 TEX14Q8IWB6 1497 aa20.71■□□□□ 0.91
ERGIC3-212ENST00000465298 CD109Q6YHK3 1445 aa20.7■□□□□ 0.9
ERGIC3-212ENST00000465298 KIF13AQ9H1H9 1805 aa20.69■□□□□ 0.9
ERGIC3-212ENST00000465298 MTUS2Q5JR59 1369 aa20.68■□□□□ 0.9
ERGIC3-212ENST00000465298 MAP3K1Q13233 1512 aa20.68■□□□□ 0.9
ERGIC3-212ENST00000465298 PHLDB1Q86UU1 1377 aa20.67■□□□□ 0.9
ERGIC3-212ENST00000465298 CFAP43Q8NDM7 1665 aa20.67■□□□□ 0.9
ERGIC3-212ENST00000465298 MAGI3Q5TCQ9 1506 aa20.65■□□□□ 0.9
ERGIC3-212ENST00000465298 ABCA9Q8IUA7 1624 aa20.64■□□□□ 0.9
ERGIC3-212ENST00000465298 MAP3K4Q9Y6R4 1608 aa20.64■□□□□ 0.89
ERGIC3-212ENST00000465298 KIF14Q15058 1648 aa20.63■□□□□ 0.89
ERGIC3-212ENST00000465298 EHBP1L1Q8N3D4 1523 aa20.58■□□□□ 0.89
ERGIC3-212ENST00000465298 TIAM1Q13009 1591 aa20.58■□□□□ 0.88
ERGIC3-212ENST00000465298 LRRIQ1Q96JM4 1722 aa20.57■□□□□ 0.88
ERGIC3-212ENST00000465298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.57■□□□□ 0.88
ERGIC3-212ENST00000465298 PLCH2O75038 1416 aa20.56■□□□□ 0.88
ERGIC3-212ENST00000465298 EFCAB2Q5VUJ9 269 aa20.56■□□□□ 0.88
ERGIC3-212ENST00000465298 ARAP3Q8WWN8 1544 aa20.56■□□□□ 0.88
ERGIC3-212ENST00000465298 NEO1Q92859 1461 aa20.56■□□□□ 0.88
ERGIC3-212ENST00000465298 LRRC9Q6ZRR7 1453 aa20.52■□□□□ 0.88
ERGIC3-212ENST00000465298 CCNB3Q8WWL7 1395 aa20.52■□□□□ 0.88
ERGIC3-212ENST00000465298 CFAP74Q9C0B2 1584 aa20.51■□□□□ 0.87
ERGIC3-212ENST00000465298 TSPOAP1O95153 1857 aa20.5■□□□□ 0.87
ERGIC3-212ENST00000465298 FANCAO15360 1455 aa20.5■□□□□ 0.87
ERGIC3-212ENST00000465298 TTC37Q6PGP7 1564 aa20.48■□□□□ 0.87
ERGIC3-212ENST00000465298 PPRC1Q5VV67 1664 aaKnown RBP20.46■□□□□ 0.87
ERGIC3-212ENST00000465298 CFDP1Q9UEE9 299 aaPredicted RBP20.46■□□□□ 0.87
ERGIC3-212ENST00000465298 SUPT6HQ7KZ85 1726 aaKnown RBP20.46■□□□□ 0.87
ERGIC3-212ENST00000465298 KDM6BO15054 1643 aa20.45■□□□□ 0.87
ERGIC3-212ENST00000465298 AKNAQ7Z591 1439 aa20.45■□□□□ 0.86
ERGIC3-212ENST00000465298 MYO5CQ9NQX4 1742 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms