RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 CTTNBP2Q8WZ74 1663 aa27.79■■■□□ 2.04
TSPAN4-210ENST00000464987 MAP3K1Q13233 1512 aa27.79■■■□□ 2.04
TSPAN4-210ENST00000464987 FHOD3Q2V2M9 1422 aa27.77■■■□□ 2.04
TSPAN4-210ENST00000464987 TDRD9Q8NDG6 1382 aaKnown RBP27.76■■■□□ 2.03
TSPAN4-210ENST00000464987 LRRC9Q6ZRR7 1453 aa27.75■■■□□ 2.03
TSPAN4-210ENST00000464987 ITGAEP38570 1179 aa27.75■■■□□ 2.03
TSPAN4-210ENST00000464987 FHAD1B1AJZ9 1412 aa27.74■■■□□ 2.03
TSPAN4-210ENST00000464987 PDS5BQ9NTI5 1447 aa27.74■■■□□ 2.03
TSPAN4-210ENST00000464987 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
TSPAN4-210ENST00000464987 CFAP43Q8NDM7 1665 aa27.72■■■□□ 2.03
TSPAN4-210ENST00000464987 ATP1B4Q9UN42 357 aaPredicted RBP27.69■■■□□ 2.02
TSPAN4-210ENST00000464987 PHLDB1Q86UU1 1377 aa27.67■■■□□ 2.02
TSPAN4-210ENST00000464987 SCAF1Q9H7N4 1312 aaKnown RBP27.67■■■□□ 2.02
TSPAN4-210ENST00000464987 EFCAB5A4FU69 1503 aa27.66■■■□□ 2.02
TSPAN4-210ENST00000464987 GAPVD1Q14C86 1478 aa27.66■■■□□ 2.02
TSPAN4-210ENST00000464987 CLSPNQ9HAW4 1339 aa27.63■■■□□ 2.01
TSPAN4-210ENST00000464987 PELP1Q8IZL8 1130 aaKnown RBP27.59■■■□□ 2.01
TSPAN4-210ENST00000464987 FYCO1Q9BQS8 1478 aa27.59■■■□□ 2.01
TSPAN4-210ENST00000464987 TARBP1Q13395 1621 aaKnown RBP27.58■■■□□ 2.01
TSPAN4-210ENST00000464987 CASKIN1Q8WXD9 1431 aa27.57■■■□□ 2
TSPAN4-210ENST00000464987 NEUROD1Q13562 356 aa27.55■■■□□ 2
TSPAN4-210ENST00000464987 RAB3GAP2Q9H2M9 1393 aa27.54■■■□□ 2
TSPAN4-210ENST00000464987 AQRO60306 1485 aaKnown RBP eCLIP27.53■■■□□ 24e-8■■■■■ 31.9
TSPAN4-210ENST00000464987 FAM50AQ14320 339 aaKnown RBP27.51■■□□□ 1.99
TSPAN4-210ENST00000464987 SAMD9Q5K651 1589 aa27.51■■□□□ 1.99
TSPAN4-210ENST00000464987 ACIN1Q9UKV3 1341 aaKnown RBP27.5■■□□□ 1.99
TSPAN4-210ENST00000464987 SNAPC4Q5SXM2 1469 aa27.5■■□□□ 1.99
TSPAN4-210ENST00000464987 LRRIQ1Q96JM4 1722 aa27.5■■□□□ 1.99
TSPAN4-210ENST00000464987 FMN1Q68DA7 1419 aa27.48■■□□□ 1.99
TSPAN4-210ENST00000464987 PBRM1Q86U86 1689 aa27.46■■□□□ 1.99
TSPAN4-210ENST00000464987 MIER1Q8N108 512 aa27.45■■□□□ 1.98
TSPAN4-210ENST00000464987 SETD5Q9C0A6 1442 aa27.43■■□□□ 1.98
TSPAN4-210ENST00000464987 MAPKBP1O60336 1514 aa27.42■■□□□ 1.98
TSPAN4-210ENST00000464987 MRC2Q9UBG0 1479 aa27.37■■□□□ 1.97
TSPAN4-210ENST00000464987 GRIN2BQ13224 1484 aa27.34■■□□□ 1.97
TSPAN4-210ENST00000464987 CENPBP07199 599 aaPredicted RBP27.33■■□□□ 1.97
TSPAN4-210ENST00000464987 MTUS2Q5JR59 1369 aa27.32■■□□□ 1.96
TSPAN4-210ENST00000464987 ADAMTS12P58397 1594 aa27.3■■□□□ 1.96
TSPAN4-210ENST00000464987 YTHDC1Q96MU7 727 aaKnown RBP27.3■■□□□ 1.96
TSPAN4-210ENST00000464987 FGD6Q6ZV73 1430 aa27.29■■□□□ 1.96
TSPAN4-210ENST00000464987 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.95
TSPAN4-210ENST00000464987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.25■■□□□ 1.954e-6■■■■■ 46.2
TSPAN4-210ENST00000464987 IQGAP2Q13576 1575 aa27.24■■□□□ 1.95
TSPAN4-210ENST00000464987 THOC2Q8NI27 1593 aaKnown RBP27.23■■□□□ 1.95
TSPAN4-210ENST00000464987 NCOA2Q15596 1464 aa27.22■■□□□ 1.95
TSPAN4-210ENST00000464987 SIN3AQ96ST3 1273 aa27.21■■□□□ 1.95
TSPAN4-210ENST00000464987 MAGI3Q5TCQ9 1506 aa27.21■■□□□ 1.95
TSPAN4-210ENST00000464987 SUPT6HQ7KZ85 1726 aaKnown RBP27.2■■□□□ 1.94
TSPAN4-210ENST00000464987 PTPRKQ15262 1439 aa27.19■■□□□ 1.94
TSPAN4-210ENST00000464987 GTF3C3Q9Y5Q9 886 aa27.18■■□□□ 1.94
TSPAN4-210ENST00000464987 WDR62O43379 1518 aa27.17■■□□□ 1.94
TSPAN4-210ENST00000464987 EHBP1L1Q8N3D4 1523 aa27.16■■□□□ 1.94
TSPAN4-210ENST00000464987 IFT140Q96RY7 1462 aa27.15■■□□□ 1.94
TSPAN4-210ENST00000464987 MYOM3Q5VTT5 1437 aa27.15■■□□□ 1.94
TSPAN4-210ENST00000464987 UGGT2Q9NYU1 1516 aa27.11■■□□□ 1.93
TSPAN4-210ENST00000464987 HECW1Q76N89 1606 aa27.11■■□□□ 1.93
TSPAN4-210ENST00000464987 ERCC6Q03468 1493 aa27.1■■□□□ 1.93
TSPAN4-210ENST00000464987 CCDC18Q5T9S5 1454 aa27.09■■□□□ 1.93
TSPAN4-210ENST00000464987 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
TSPAN4-210ENST00000464987 PTPN23Q9H3S7 1636 aa27.08■■□□□ 1.93
TSPAN4-210ENST00000464987 CDK13Q14004 1512 aaKnown RBP27.07■■□□□ 1.92
TSPAN4-210ENST00000464987 ARID3CA6NKF2 412 aa27.07■■□□□ 1.92
TSPAN4-210ENST00000464987 EPRSP07814 1512 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-210ENST00000464987 EIF4G3O43432 1585 aaKnown RBP27.06■■□□□ 1.92
TSPAN4-210ENST00000464987 HFM1A2PYH4 1435 aa27.04■■□□□ 1.92
TSPAN4-210ENST00000464987 NAIPQ13075 1403 aa27■■□□□ 1.91
TSPAN4-210ENST00000464987 DISP1Q96F81 1524 aa26.97■■□□□ 1.91
TSPAN4-210ENST00000464987 KIAA0556O60303 1618 aa26.97■■□□□ 1.91
TSPAN4-210ENST00000464987 KIAA0586Q9BVV6 1533 aa26.96■■□□□ 1.91
TSPAN4-210ENST00000464987 GRIN2AQ12879 1464 aa26.96■■□□□ 1.91
TSPAN4-210ENST00000464987 UACAQ9BZF9 1416 aa26.94■■□□□ 1.9
TSPAN4-210ENST00000464987 TCOF1Q13428 1488 aaKnown RBP26.93■■□□□ 1.9
TSPAN4-210ENST00000464987 CHIC2Q9UKJ5 165 aa26.92■■□□□ 1.9
TSPAN4-210ENST00000464987 RRP7BPQ9NSQ0 103 aa26.9■■□□□ 1.9
TSPAN4-210ENST00000464987 PPP1R15AO75807 674 aaPredicted RBP26.88■■□□□ 1.89
TSPAN4-210ENST00000464987 TIMELESSQ9UNS1 1208 aa26.88■■□□□ 1.89
TSPAN4-210ENST00000464987 NUP153P49790 1475 aaKnown RBP26.85■■□□□ 1.89
TSPAN4-210ENST00000464987 GCC2Q8IWJ2 1684 aa26.84■■□□□ 1.89
TSPAN4-210ENST00000464987 KDM6BO15054 1643 aa26.84■■□□□ 1.89
TSPAN4-210ENST00000464987 CEP170Q5SW79 1584 aa26.84■■□□□ 1.89
TSPAN4-210ENST00000464987 RAPGEF6Q8TEU7 1601 aa26.84■■□□□ 1.89
TSPAN4-210ENST00000464987 HIRIP3Q9BW71 556 aaPredicted RBP26.84■■□□□ 1.89
TSPAN4-210ENST00000464987 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
TSPAN4-210ENST00000464987 MIA2Q96PC5 1412 aa26.8■■□□□ 1.88
TSPAN4-210ENST00000464987 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
TSPAN4-210ENST00000464987 TONSLQ96HA7 1378 aa26.79■■□□□ 1.88
TSPAN4-210ENST00000464987 FBLN2P98095 1184 aa26.78■■□□□ 1.88
TSPAN4-210ENST00000464987 SYNJ2O15056 1496 aa26.77■■□□□ 1.88
TSPAN4-210ENST00000464987 DDX10Q13206 875 aaKnown RBP26.76■■□□□ 1.87
TSPAN4-210ENST00000464987 DENND4BO75064 1496 aaPredicted RBP26.76■■□□□ 1.87
TSPAN4-210ENST00000464987 KCNH8Q96L42 1107 aa26.73■■□□□ 1.87
TSPAN4-210ENST00000464987 PLB1Q6P1J6 1458 aa26.71■■□□□ 1.87
TSPAN4-210ENST00000464987 ZNF644Q9H582 1327 aaPredicted RBP26.71■■□□□ 1.87
TSPAN4-210ENST00000464987 AKNAQ7Z591 1439 aa26.71■■□□□ 1.87
TSPAN4-210ENST00000464987 TRIM52Q96A61 297 aa26.7■■□□□ 1.86
TSPAN4-210ENST00000464987 KDM5BQ9UGL1 1544 aa26.7■■□□□ 1.86
TSPAN4-210ENST00000464987 MYT1Q01538 1121 aa26.68■■□□□ 1.86
TSPAN4-210ENST00000464987 DAPK1P53355 1430 aa26.67■■□□□ 1.86
TSPAN4-210ENST00000464987 PRG4Q92954 1404 aaPredicted RBP26.67■■□□□ 1.86
TSPAN4-210ENST00000464987 DNMT1P26358 1616 aaKnown RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms