RNA–Protein interactions for RNA: ENST00000464786.5

TSPAN1-202, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 872 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-202ENST00000464786 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
TSPAN1-202ENST00000464786 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
TSPAN1-202ENST00000464786 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
TSPAN1-202ENST00000464786 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
TSPAN1-202ENST00000464786 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
TSPAN1-202ENST00000464786 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
TSPAN1-202ENST00000464786 SHROOM2Q13796 1616 aa22.05■■□□□ 1.12
TSPAN1-202ENST00000464786 IQGAP2Q13576 1575 aa21.99■■□□□ 1.11
TSPAN1-202ENST00000464786 CARMIL2Q6F5E8 1435 aa21.98■■□□□ 1.11
TSPAN1-202ENST00000464786 ARAP1Q96P48 1450 aa21.97■■□□□ 1.11
TSPAN1-202ENST00000464786 KIF21BO75037 1637 aa21.97■■□□□ 1.11
TSPAN1-202ENST00000464786 UBTFP17480 764 aaKnown RBP21.94■■□□□ 1.1
TSPAN1-202ENST00000464786 ERCC6L2Q5T890 1561 aa21.92■■□□□ 1.1
TSPAN1-202ENST00000464786 UGGT2Q9NYU1 1516 aa21.91■■□□□ 1.1
TSPAN1-202ENST00000464786 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
TSPAN1-202ENST00000464786 CTTNBP2Q8WZ74 1663 aa21.89■■□□□ 1.1
TSPAN1-202ENST00000464786 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
TSPAN1-202ENST00000464786 EHMT2Q96KQ7 1210 aa21.86■■□□□ 1.09
TSPAN1-202ENST00000464786 PTPRGP23470 1445 aa21.86■■□□□ 1.09
TSPAN1-202ENST00000464786 DISP1Q96F81 1524 aa21.84■■□□□ 1.09
TSPAN1-202ENST00000464786 TTBK1Q5TCY1 1321 aaPredicted RBP21.78■■□□□ 1.08
TSPAN1-202ENST00000464786 NPM1P06748 294 aaKnown RBP eCLIP21.76■■□□□ 1.07
TSPAN1-202ENST00000464786 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
TSPAN1-202ENST00000464786 KIAA0556O60303 1618 aa21.75■■□□□ 1.07
TSPAN1-202ENST00000464786 P3H3Q8IVL6 736 aa21.74■■□□□ 1.07
TSPAN1-202ENST00000464786 UACAQ9BZF9 1416 aa21.69■■□□□ 1.06
TSPAN1-202ENST00000464786 SAMD9Q5K651 1589 aa21.66■■□□□ 1.06
TSPAN1-202ENST00000464786 EFCAB5A4FU69 1503 aa21.65■■□□□ 1.06
TSPAN1-202ENST00000464786 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.06
TSPAN1-202ENST00000464786 LOC105371045A0A1W2PR82 267 aa21.62■■□□□ 1.05
TSPAN1-202ENST00000464786 TRHP20396 242 aaPredicted RBP21.61■■□□□ 1.05
TSPAN1-202ENST00000464786 ABCC2Q92887 1545 aa21.59■■□□□ 1.05
TSPAN1-202ENST00000464786 ADCY10Q96PN6 1610 aa21.58■■□□□ 1.05
TSPAN1-202ENST00000464786 FHOD3Q2V2M9 1422 aa21.58■■□□□ 1.05
TSPAN1-202ENST00000464786 PLB1Q6P1J6 1458 aa21.56■■□□□ 1.04
TSPAN1-202ENST00000464786 ARHGAP35Q9NRY4 1499 aa21.56■■□□□ 1.04
TSPAN1-202ENST00000464786 ABCA8O94911 1581 aa21.54■■□□□ 1.04
TSPAN1-202ENST00000464786 CLIP1P30622 1438 aa21.54■■□□□ 1.04
TSPAN1-202ENST00000464786 FMN1Q68DA7 1419 aa21.53■■□□□ 1.04
TSPAN1-202ENST00000464786 KDM5BQ9UGL1 1544 aa21.52■■□□□ 1.04
TSPAN1-202ENST00000464786 MAPKBP1O60336 1514 aa21.49■■□□□ 1.03
TSPAN1-202ENST00000464786 RAPGEF6Q8TEU7 1601 aa21.45■■□□□ 1.02
TSPAN1-202ENST00000464786 CEP162Q5TB80 1403 aa21.44■■□□□ 1.02
TSPAN1-202ENST00000464786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
TSPAN1-202ENST00000464786 HNRNPUL2Q1KMD3 747 aaKnown RBP21.43■■□□□ 1.02
TSPAN1-202ENST00000464786 ASXL2Q76L83 1435 aa21.43■■□□□ 1.02
TSPAN1-202ENST00000464786 ATP10BO94823 1461 aa21.42■■□□□ 1.02
TSPAN1-202ENST00000464786 FAM69CQ0P6D2 419 aa21.42■■□□□ 1.02
TSPAN1-202ENST00000464786 ATP1B4Q9UN42 357 aaPredicted RBP21.42■■□□□ 1.02
TSPAN1-202ENST00000464786 ARID3CA6NKF2 412 aa21.4■■□□□ 1.02
TSPAN1-202ENST00000464786 ABCC10Q5T3U5 1492 aa21.39■■□□□ 1.02
TSPAN1-202ENST00000464786 ZCCHC11Q5TAX3 1644 aaKnown RBP21.39■■□□□ 1.01
TSPAN1-202ENST00000464786 NUP153P49790 1475 aaKnown RBP21.39■■□□□ 1.01
TSPAN1-202ENST00000464786 PLEKHD1A6NEE1 506 aa21.37■■□□□ 1.01
TSPAN1-202ENST00000464786 CDK11AQ9UQ88 783 aaPredicted RBP21.35■■□□□ 1.01
TSPAN1-202ENST00000464786 CASKIN1Q8WXD9 1431 aa21.34■■□□□ 1.01
TSPAN1-202ENST00000464786 WDR7Q9Y4E6 1490 aa21.33■■□□□ 1.01
TSPAN1-202ENST00000464786 KCNH8Q96L42 1107 aa21.33■■□□□ 1.01
TSPAN1-202ENST00000464786 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
TSPAN1-202ENST00000464786 HECW1Q76N89 1606 aa21.29■■□□□ 1
TSPAN1-202ENST00000464786 GLI2P10070 1586 aa21.27■■□□□ 1
TSPAN1-202ENST00000464786 DIP2BQ9P265 1576 aa21.27■■□□□ 1
TSPAN1-202ENST00000464786 FYCO1Q9BQS8 1478 aa21.26■□□□□ 0.99
TSPAN1-202ENST00000464786 KIF13AQ9H1H9 1805 aa21.25■□□□□ 0.99
TSPAN1-202ENST00000464786 CCDC18Q5T9S5 1454 aa21.24■□□□□ 0.99
TSPAN1-202ENST00000464786 CDK13Q14004 1512 aaKnown RBP21.21■□□□□ 0.99
TSPAN1-202ENST00000464786 PCF11O94913 1555 aaKnown RBP21.2■□□□□ 0.98
TSPAN1-202ENST00000464786 VPS8Q8N3P4 1428 aa21.2■□□□□ 0.98
TSPAN1-202ENST00000464786 CD109Q6YHK3 1445 aa21.18■□□□□ 0.98
TSPAN1-202ENST00000464786 TROQ12816 1431 aaPredicted RBP21.14■□□□□ 0.98
TSPAN1-202ENST00000464786 TEX14Q8IWB6 1497 aa21.12■□□□□ 0.97
TSPAN1-202ENST00000464786 APLP2Q06481 763 aa21.11■□□□□ 0.97
TSPAN1-202ENST00000464786 MAP3K4Q9Y6R4 1608 aa21.11■□□□□ 0.97
TSPAN1-202ENST00000464786 MAGI3Q5TCQ9 1506 aa21.1■□□□□ 0.97
TSPAN1-202ENST00000464786 CFAP43Q8NDM7 1665 aa21.1■□□□□ 0.97
TSPAN1-202ENST00000464786 ABCA9Q8IUA7 1624 aa21.09■□□□□ 0.97
TSPAN1-202ENST00000464786 LRRIQ1Q96JM4 1722 aa21.09■□□□□ 0.97
TSPAN1-202ENST00000464786 TSPOAP1O95153 1857 aa21.09■□□□□ 0.97
TSPAN1-202ENST00000464786 MTUS2Q5JR59 1369 aa21.08■□□□□ 0.96
TSPAN1-202ENST00000464786 PHLDB1Q86UU1 1377 aa21.07■□□□□ 0.96
TSPAN1-202ENST00000464786 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.04■□□□□ 0.96
TSPAN1-202ENST00000464786 MAP3K1Q13233 1512 aa21.02■□□□□ 0.96
TSPAN1-202ENST00000464786 KIF14Q15058 1648 aa21.01■□□□□ 0.95
TSPAN1-202ENST00000464786 EFCAB2Q5VUJ9 269 aa21.01■□□□□ 0.95
TSPAN1-202ENST00000464786 PPRC1Q5VV67 1664 aaKnown RBP21■□□□□ 0.95
TSPAN1-202ENST00000464786 PLCH2O75038 1416 aa21■□□□□ 0.95
TSPAN1-202ENST00000464786 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
TSPAN1-202ENST00000464786 NEO1Q92859 1461 aa20.98■□□□□ 0.95
TSPAN1-202ENST00000464786 TIAM1Q13009 1591 aa20.96■□□□□ 0.95
TSPAN1-202ENST00000464786 TTC37Q6PGP7 1564 aa20.95■□□□□ 0.94
TSPAN1-202ENST00000464786 EHBP1L1Q8N3D4 1523 aa20.94■□□□□ 0.94
TSPAN1-202ENST00000464786 FANCAO15360 1455 aa20.94■□□□□ 0.94
TSPAN1-202ENST00000464786 ARAP3Q8WWN8 1544 aa20.94■□□□□ 0.94
TSPAN1-202ENST00000464786 CCNB3Q8WWL7 1395 aa20.93■□□□□ 0.94
TSPAN1-202ENST00000464786 LRRC9Q6ZRR7 1453 aa20.93■□□□□ 0.94
TSPAN1-202ENST00000464786 KDM6BO15054 1643 aa20.93■□□□□ 0.94
TSPAN1-202ENST00000464786 KANK4Q5T7N3 995 aaPredicted RBP20.92■□□□□ 0.94
TSPAN1-202ENST00000464786 AKNAQ7Z591 1439 aa20.92■□□□□ 0.94
TSPAN1-202ENST00000464786 CFDP1Q9UEE9 299 aaPredicted RBP20.89■□□□□ 0.93
TSPAN1-202ENST00000464786 MYO5CQ9NQX4 1742 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms