RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 KCNH8Q96L42 1107 aa17.85■□□□□ 0.45
NFXL1-203ENST00000464756 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
NFXL1-203ENST00000464756 HNRNPUQ00839 825 aaKnown RBP eCLIP17.84■□□□□ 0.45
NFXL1-203ENST00000464756 FKBP8Q14318 412 aa17.83■□□□□ 0.45
NFXL1-203ENST00000464756 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.45
NFXL1-203ENST00000464756 FHOD3Q2V2M9 1422 aa17.82■□□□□ 0.44
NFXL1-203ENST00000464756 FOXD1Q16676 465 aa17.8■□□□□ 0.44
NFXL1-203ENST00000464756 SALL2Q9Y467 1007 aaPredicted RBP17.79■□□□□ 0.44
NFXL1-203ENST00000464756 TSPY4P0CV99 314 aa17.78■□□□□ 0.44
NFXL1-203ENST00000464756 TSPY10P0CW01 314 aa17.78■□□□□ 0.44
NFXL1-203ENST00000464756 CFDP1Q9UEE9 299 aaPredicted RBP17.77■□□□□ 0.44
NFXL1-203ENST00000464756 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
NFXL1-203ENST00000464756 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.43
NFXL1-203ENST00000464756 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
NFXL1-203ENST00000464756 RAB3GAP2Q9H2M9 1393 aa17.75■□□□□ 0.43
NFXL1-203ENST00000464756 FHAD1B1AJZ9 1412 aa17.75■□□□□ 0.43
NFXL1-203ENST00000464756 PLEKHD1A6NEE1 506 aa17.74■□□□□ 0.43
NFXL1-203ENST00000464756 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
NFXL1-203ENST00000464756 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
NFXL1-203ENST00000464756 IGF1RP08069 1367 aa17.74■□□□□ 0.43
NFXL1-203ENST00000464756 RGL3Q3MIN7 710 aa17.73■□□□□ 0.43
NFXL1-203ENST00000464756 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
NFXL1-203ENST00000464756 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
NFXL1-203ENST00000464756 CHGAP10645 457 aaKnown RBP17.71■□□□□ 0.43
NFXL1-203ENST00000464756 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
NFXL1-203ENST00000464756 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
NFXL1-203ENST00000464756 EIF4G2P78344 907 aaKnown RBP eCLIP17.68■□□□□ 0.42
NFXL1-203ENST00000464756 FGD5Q6ZNL6 1462 aa17.67■□□□□ 0.42
NFXL1-203ENST00000464756 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
NFXL1-203ENST00000464756 SETD5Q9C0A6 1442 aa17.66■□□□□ 0.42
NFXL1-203ENST00000464756 PDS5BQ9NTI5 1447 aa17.66■□□□□ 0.42
NFXL1-203ENST00000464756 CLSPNQ9HAW4 1339 aa17.63■□□□□ 0.41
NFXL1-203ENST00000464756 NESP48681 1621 aa17.62■□□□□ 0.41
NFXL1-203ENST00000464756 DHX57Q6P158 1386 aaKnown RBP17.62■□□□□ 0.41
NFXL1-203ENST00000464756 ARHGAP35Q9NRY4 1499 aa17.61■□□□□ 0.41
NFXL1-203ENST00000464756 KIF21BO75037 1637 aa17.61■□□□□ 0.41
NFXL1-203ENST00000464756 ARAP1Q96P48 1450 aa17.59■□□□□ 0.41
NFXL1-203ENST00000464756 TMC1Q8TDI8 760 aa17.55■□□□□ 0.4
NFXL1-203ENST00000464756 CFTRP13569 1480 aa17.54■□□□□ 0.4
NFXL1-203ENST00000464756 FMN1Q68DA7 1419 aa17.53■□□□□ 0.4
NFXL1-203ENST00000464756 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
NFXL1-203ENST00000464756 NPM1P06748 294 aaKnown RBP eCLIP17.52■□□□□ 0.4
NFXL1-203ENST00000464756 CUX1P39880 1505 aa17.52■□□□□ 0.4
NFXL1-203ENST00000464756 PHLDB1Q86UU1 1377 aa17.5■□□□□ 0.39
NFXL1-203ENST00000464756 PPP1R15AO75807 674 aaPredicted RBP17.49■□□□□ 0.39
NFXL1-203ENST00000464756 MPHOSPH9Q99550 1183 aa17.48■□□□□ 0.39
NFXL1-203ENST00000464756 CARD11Q9BXL7 1154 aa17.47■□□□□ 0.39
NFXL1-203ENST00000464756 HSPA5P11021 654 aaKnown RBP17.47■□□□□ 0.39
NFXL1-203ENST00000464756 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
NFXL1-203ENST00000464756 UNC13AQ9UPW8 1703 aa17.47■□□□□ 0.39
NFXL1-203ENST00000464756 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
NFXL1-203ENST00000464756 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.392e-6■■■■■ 26.9
NFXL1-203ENST00000464756 PRXQ9BXM0 1461 aa17.46■□□□□ 0.39
NFXL1-203ENST00000464756 PKD2Q13563 968 aa17.46■□□□□ 0.38
NFXL1-203ENST00000464756 JPH4Q96JJ6 628 aa17.45■□□□□ 0.38
NFXL1-203ENST00000464756 DCAF11Q8TEB1 546 aa17.44■□□□□ 0.38
NFXL1-203ENST00000464756 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
NFXL1-203ENST00000464756 L3MBTL2Q969R5 705 aa17.44■□□□□ 0.38
NFXL1-203ENST00000464756 GAPVD1Q14C86 1478 aa17.42■□□□□ 0.38
NFXL1-203ENST00000464756 DAXXQ9UER7 740 aaPredicted RBP17.41■□□□□ 0.38
NFXL1-203ENST00000464756 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
NFXL1-203ENST00000464756 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
NFXL1-203ENST00000464756 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
NFXL1-203ENST00000464756 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
NFXL1-203ENST00000464756 STAG3Q9UJ98 1225 aa17.35■□□□□ 0.37
NFXL1-203ENST00000464756 TIMELESSQ9UNS1 1208 aa17.34■□□□□ 0.37
NFXL1-203ENST00000464756 LRRC9Q6ZRR7 1453 aa17.33■□□□□ 0.36
NFXL1-203ENST00000464756 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
NFXL1-203ENST00000464756 NUP155O75694 1391 aa17.32■□□□□ 0.36
NFXL1-203ENST00000464756 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
NFXL1-203ENST00000464756 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
NFXL1-203ENST00000464756 CCDC136Q96JN2 1154 aa17.31■□□□□ 0.36
NFXL1-203ENST00000464756 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
NFXL1-203ENST00000464756 CARMIL2Q6F5E8 1435 aa17.29■□□□□ 0.36
NFXL1-203ENST00000464756 ERICH3Q5RHP9 1530 aa17.29■□□□□ 0.36
NFXL1-203ENST00000464756 TOPBP1Q92547 1522 aa17.28■□□□□ 0.36
NFXL1-203ENST00000464756 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
NFXL1-203ENST00000464756 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
NFXL1-203ENST00000464756 WDR43Q15061 677 aaKnown RBP eCLIP17.23■□□□□ 0.35
NFXL1-203ENST00000464756 ESF1Q9H501 851 aaKnown RBP17.23■□□□□ 0.35
NFXL1-203ENST00000464756 TNNT2P45379 298 aaPredicted RBP17.22■□□□□ 0.35
NFXL1-203ENST00000464756 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
NFXL1-203ENST00000464756 MYT1Q01538 1121 aa17.22■□□□□ 0.35
NFXL1-203ENST00000464756 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
NFXL1-203ENST00000464756 SLC24A1O60721 1099 aa17.21■□□□□ 0.35
NFXL1-203ENST00000464756 RRBP1Q9P2E9 1410 aaKnown RBP17.21■□□□□ 0.35
NFXL1-203ENST00000464756 GGT6Q6P531 493 aa17.19■□□□□ 0.34
NFXL1-203ENST00000464756 CASKIN1Q8WXD9 1431 aa17.18■□□□□ 0.34
NFXL1-203ENST00000464756 ANKRD30AQ9BXX3 1397 aa17.18■□□□□ 0.34
NFXL1-203ENST00000464756 CCER2I3L3R5 266 aa17.18■□□□□ 0.34
NFXL1-203ENST00000464756 RTL5Q5HYW3 569 aaPredicted RBP17.18■□□□□ 0.34
NFXL1-203ENST00000464756 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
NFXL1-203ENST00000464756 NCOA2Q15596 1464 aa17.17■□□□□ 0.34
NFXL1-203ENST00000464756 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
NFXL1-203ENST00000464756 SAFB2Q14151 953 aaKnown RBP eCLIP17.16■□□□□ 0.34
NFXL1-203ENST00000464756 KNSTRNQ9Y448 316 aa17.16■□□□□ 0.34
NFXL1-203ENST00000464756 ST20-MTHFSA0A0A6YYL1 179 aa17.13■□□□□ 0.33
NFXL1-203ENST00000464756 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
NFXL1-203ENST00000464756 PTPRGP23470 1445 aa17.12■□□□□ 0.33
NFXL1-203ENST00000464756 EFCAB2Q5VUJ9 269 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms