RNA–Protein interactions for RNA: ENST00000464728.5

CHTF18-207, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 4,088 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-207ENST00000464728 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.885e-7■■■■■ 29
CHTF18-207ENST00000464728 TSPY4P0CV99 314 aa20.57■□□□□ 0.88
CHTF18-207ENST00000464728 TSPY10P0CW01 314 aa20.57■□□□□ 0.88
CHTF18-207ENST00000464728 FHOD3Q2V2M9 1422 aa20.57■□□□□ 0.88
CHTF18-207ENST00000464728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.881e-6■■□□□ 14.5
CHTF18-207ENST00000464728 FHAD1B1AJZ9 1412 aa20.55■□□□□ 0.88
CHTF18-207ENST00000464728 CFDP1Q9UEE9 299 aaPredicted RBP20.55■□□□□ 0.88
CHTF18-207ENST00000464728 CUX1P39880 1505 aa20.51■□□□□ 0.87
CHTF18-207ENST00000464728 JPH4Q96JJ6 628 aa20.51■□□□□ 0.87
CHTF18-207ENST00000464728 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
CHTF18-207ENST00000464728 PEG3Q9GZU2 1588 aa20.51■□□□□ 0.87
CHTF18-207ENST00000464728 ZNF316A6NFI3 1004 aaPredicted RBP20.5■□□□□ 0.87
CHTF18-207ENST00000464728 CCNB3Q8WWL7 1395 aa20.44■□□□□ 0.86
CHTF18-207ENST00000464728 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
CHTF18-207ENST00000464728 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
CHTF18-207ENST00000464728 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
CHTF18-207ENST00000464728 TONSLQ96HA7 1378 aa20.4■□□□□ 0.86
CHTF18-207ENST00000464728 HIRIP3Q9BW71 556 aaPredicted RBP20.38■□□□□ 0.85
CHTF18-207ENST00000464728 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
CHTF18-207ENST00000464728 FMN1Q68DA7 1419 aa20.37■□□□□ 0.85
CHTF18-207ENST00000464728 PLPPR3Q6T4P5 718 aa20.37■□□□□ 0.85
CHTF18-207ENST00000464728 CARMIL2Q6F5E8 1435 aa20.36■□□□□ 0.85
CHTF18-207ENST00000464728 CHGAP10645 457 aaKnown RBP20.36■□□□□ 0.85
CHTF18-207ENST00000464728 SIN3AQ96ST3 1273 aa20.33■□□□□ 0.85
CHTF18-207ENST00000464728 KDM2AQ9Y2K7 1162 aa20.31■□□□□ 0.84
CHTF18-207ENST00000464728 MRC2Q9UBG0 1479 aa20.29■□□□□ 0.84
CHTF18-207ENST00000464728 PRXQ9BXM0 1461 aa20.27■□□□□ 0.83
CHTF18-207ENST00000464728 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
CHTF18-207ENST00000464728 DDX10Q13206 875 aaKnown RBP20.23■□□□□ 0.83
CHTF18-207ENST00000464728 ARHGAP35Q9NRY4 1499 aa20.23■□□□□ 0.83
CHTF18-207ENST00000464728 PELP1Q8IZL8 1130 aaKnown RBP20.22■□□□□ 0.83
CHTF18-207ENST00000464728 RGL3Q3MIN7 710 aa20.21■□□□□ 0.83
CHTF18-207ENST00000464728 ESF1Q9H501 851 aaKnown RBP20.21■□□□□ 0.83
CHTF18-207ENST00000464728 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
CHTF18-207ENST00000464728 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
CHTF18-207ENST00000464728 GRIN2BQ13224 1484 aa20.2■□□□□ 0.82
CHTF18-207ENST00000464728 ARAP1Q96P48 1450 aa20.2■□□□□ 0.82
CHTF18-207ENST00000464728 BCANQ96GW7 911 aa20.2■□□□□ 0.82
CHTF18-207ENST00000464728 KIF21BO75037 1637 aa20.19■□□□□ 0.82
CHTF18-207ENST00000464728 URB2Q14146 1524 aaKnown RBP20.18■□□□□ 0.82
CHTF18-207ENST00000464728 ANP32CO43423 234 aa20.18■□□□□ 0.82
CHTF18-207ENST00000464728 FOXD1Q16676 465 aa20.17■□□□□ 0.82
CHTF18-207ENST00000464728 NEFLP07196 543 aa20.16■□□□□ 0.82
CHTF18-207ENST00000464728 PTPRGP23470 1445 aa20.16■□□□□ 0.82
CHTF18-207ENST00000464728 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
CHTF18-207ENST00000464728 STAG3Q9UJ98 1225 aa20.13■□□□□ 0.81
CHTF18-207ENST00000464728 HNRNPMP52272 730 aaKnown RBP eCLIP20.12■□□□□ 0.811e-7■■■□□ 17.2
CHTF18-207ENST00000464728 IFT140Q96RY7 1462 aa20.12■□□□□ 0.81
CHTF18-207ENST00000464728 CYB5RLQ6IPT4 315 aa20.12■□□□□ 0.81
CHTF18-207ENST00000464728 RAB3GAP2Q9H2M9 1393 aa20.1■□□□□ 0.81
CHTF18-207ENST00000464728 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
CHTF18-207ENST00000464728 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
CHTF18-207ENST00000464728 SETD5Q9C0A6 1442 aa20.08■□□□□ 0.81
CHTF18-207ENST00000464728 SNAPC4Q5SXM2 1469 aa20.07■□□□□ 0.8
CHTF18-207ENST00000464728 ZNF608Q9ULD9 1512 aaPredicted RBP20.07■□□□□ 0.8
CHTF18-207ENST00000464728 ZNF644Q9H582 1327 aaPredicted RBP20.04■□□□□ 0.8
CHTF18-207ENST00000464728 EFCAB2Q5VUJ9 269 aa20.03■□□□□ 0.8
CHTF18-207ENST00000464728 TRHP20396 242 aaPredicted RBP20.01■□□□□ 0.79
CHTF18-207ENST00000464728 PHLDB1Q86UU1 1377 aa20.01■□□□□ 0.79
CHTF18-207ENST00000464728 MIER1Q8N108 512 aa19.99■□□□□ 0.79
CHTF18-207ENST00000464728 CCDC18Q5T9S5 1454 aa19.98■□□□□ 0.79
CHTF18-207ENST00000464728 ARID4BQ4LE39 1312 aaPredicted RBP19.98■□□□□ 0.79
CHTF18-207ENST00000464728 PKD2Q13563 968 aa19.97■□□□□ 0.79
CHTF18-207ENST00000464728 GGT6Q6P531 493 aa19.96■□□□□ 0.79
CHTF18-207ENST00000464728 EIF4G2P78344 907 aaKnown RBP eCLIP19.96■□□□□ 0.79
CHTF18-207ENST00000464728 MLECQ14165 292 aa19.96■□□□□ 0.79
CHTF18-207ENST00000464728 PRG4Q92954 1404 aaPredicted RBP19.95■□□□□ 0.78
CHTF18-207ENST00000464728 MPHOSPH9Q99550 1183 aa19.94■□□□□ 0.78
CHTF18-207ENST00000464728 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
CHTF18-207ENST00000464728 LRRC9Q6ZRR7 1453 aa19.92■□□□□ 0.78
CHTF18-207ENST00000464728 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
CHTF18-207ENST00000464728 CASKIN1Q8WXD9 1431 aa19.92■□□□□ 0.78
CHTF18-207ENST00000464728 NUP155O75694 1391 aa19.89■□□□□ 0.78
CHTF18-207ENST00000464728 DCAF11Q8TEB1 546 aa19.88■□□□□ 0.77
CHTF18-207ENST00000464728 PRDM2Q13029 1718 aa19.87■□□□□ 0.77
CHTF18-207ENST00000464728 ANKRD30AQ9BXX3 1397 aa19.86■□□□□ 0.77
CHTF18-207ENST00000464728 KIF3BO15066 747 aa19.85■□□□□ 0.77
CHTF18-207ENST00000464728 CARD11Q9BXL7 1154 aa19.84■□□□□ 0.77
CHTF18-207ENST00000464728 SPAG9O60271 1321 aaKnown RBP19.83■□□□□ 0.76
CHTF18-207ENST00000464728 FGD6Q6ZV73 1430 aa19.83■□□□□ 0.76
CHTF18-207ENST00000464728 FAM9BQ8IZU0 186 aa19.83■□□□□ 0.76
CHTF18-207ENST00000464728 GTF3C3Q9Y5Q9 886 aa19.83■□□□□ 0.76
CHTF18-207ENST00000464728 DHX57Q6P158 1386 aaKnown RBP19.82■□□□□ 0.76
CHTF18-207ENST00000464728 KIAA0586Q9BVV6 1533 aa19.82■□□□□ 0.76
CHTF18-207ENST00000464728 NCOA2Q15596 1464 aa19.8■□□□□ 0.76
CHTF18-207ENST00000464728 MYOM3Q5VTT5 1437 aa19.79■□□□□ 0.76
CHTF18-207ENST00000464728 ACIN1Q9UKV3 1341 aaKnown RBP19.78■□□□□ 0.76
CHTF18-207ENST00000464728 GRIN2AQ12879 1464 aa19.77■□□□□ 0.76
CHTF18-207ENST00000464728 FYCO1Q9BQS8 1478 aa19.77■□□□□ 0.76
CHTF18-207ENST00000464728 SALL2Q9Y467 1007 aaPredicted RBP19.77■□□□□ 0.76
CHTF18-207ENST00000464728 SYNJ2O15056 1496 aa19.76■□□□□ 0.75
CHTF18-207ENST00000464728 SENP3-EIF4A1A0A087X0R7 540 aa19.76■□□□□ 0.75
CHTF18-207ENST00000464728 PPP1R15AO75807 674 aaPredicted RBP19.76■□□□□ 0.75
CHTF18-207ENST00000464728 L3MBTL2Q969R5 705 aa19.76■□□□□ 0.75
CHTF18-207ENST00000464728 EFCAB5A4FU69 1503 aa19.74■□□□□ 0.75
CHTF18-207ENST00000464728 RSPH4AQ5TD94 716 aa19.74■□□□□ 0.75
CHTF18-207ENST00000464728 HNRNPUQ00839 825 aaKnown RBP eCLIP19.73■□□□□ 0.75
CHTF18-207ENST00000464728 AFAP1Q8N556 730 aa19.73■□□□□ 0.75
CHTF18-207ENST00000464728 PLB1Q6P1J6 1458 aa19.72■□□□□ 0.75
CHTF18-207ENST00000464728 CDK13Q14004 1512 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms