RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 FHAD1B1AJZ9 1412 aa30.32■■■□□ 2.44
TUBGCP3-204ENST00000464139 FHOD3Q2V2M9 1422 aa30.32■■■□□ 2.44
TUBGCP3-204ENST00000464139 ATP1B4Q9UN42 357 aaPredicted RBP30.29■■■□□ 2.44
TUBGCP3-204ENST00000464139 ABCA5Q8WWZ7 1642 aa30.29■■■□□ 2.44
TUBGCP3-204ENST00000464139 ZNF316A6NFI3 1004 aaPredicted RBP30.28■■■□□ 2.44
TUBGCP3-204ENST00000464139 PCF11O94913 1555 aaKnown RBP30.28■■■□□ 2.44
TUBGCP3-204ENST00000464139 CTTNBP2Q8WZ74 1663 aa30.28■■■□□ 2.44
TUBGCP3-204ENST00000464139 GAPVD1Q14C86 1478 aa30.28■■■□□ 2.44
TUBGCP3-204ENST00000464139 ITGAEP38570 1179 aa30.27■■■□□ 2.44
TUBGCP3-204ENST00000464139 LRRC9Q6ZRR7 1453 aa30.27■■■□□ 2.44
TUBGCP3-204ENST00000464139 DHX57Q6P158 1386 aaKnown RBP30.25■■■□□ 2.43
TUBGCP3-204ENST00000464139 EFCAB5A4FU69 1503 aa30.23■■■□□ 2.43
TUBGCP3-204ENST00000464139 CFAP43Q8NDM7 1665 aa30.17■■■□□ 2.42
TUBGCP3-204ENST00000464139 PHLDB1Q86UU1 1377 aa30.16■■■□□ 2.42
TUBGCP3-204ENST00000464139 TARBP1Q13395 1621 aaKnown RBP30.15■■■□□ 2.42
TUBGCP3-204ENST00000464139 FYCO1Q9BQS8 1478 aa30.13■■■□□ 2.41
TUBGCP3-204ENST00000464139 CLSPNQ9HAW4 1339 aa30.12■■■□□ 2.41
TUBGCP3-204ENST00000464139 CASKIN1Q8WXD9 1431 aa30.12■■■□□ 2.41
TUBGCP3-204ENST00000464139 AQRO60306 1485 aaKnown RBP eCLIP30.08■■■□□ 2.414e-7■■■■■ 31
TUBGCP3-204ENST00000464139 FMN1Q68DA7 1419 aa30.05■■■□□ 2.4
TUBGCP3-204ENST00000464139 FAM50AQ14320 339 aaKnown RBP30.04■■■□□ 2.4
TUBGCP3-204ENST00000464139 MRC2Q9UBG0 1479 aa30.01■■■□□ 2.4
TUBGCP3-204ENST00000464139 SAMD9Q5K651 1589 aa30.01■■■□□ 2.39
TUBGCP3-204ENST00000464139 RAB3GAP2Q9H2M9 1393 aa30■■■□□ 2.39
TUBGCP3-204ENST00000464139 SNAPC4Q5SXM2 1469 aa30■■■□□ 2.39
TUBGCP3-204ENST00000464139 PBRM1Q86U86 1689 aa29.97■■■□□ 2.39
TUBGCP3-204ENST00000464139 SETD5Q9C0A6 1442 aa29.91■■■□□ 2.38
TUBGCP3-204ENST00000464139 SCAF1Q9H7N4 1312 aaKnown RBP29.87■■■□□ 2.37
TUBGCP3-204ENST00000464139 LRRIQ1Q96JM4 1722 aa29.87■■■□□ 2.37
TUBGCP3-204ENST00000464139 MTUS2Q5JR59 1369 aa29.86■■■□□ 2.37
TUBGCP3-204ENST00000464139 GRIN2BQ13224 1484 aa29.85■■■□□ 2.37
TUBGCP3-204ENST00000464139 ADAMTS12P58397 1594 aa29.84■■■□□ 2.37
TUBGCP3-204ENST00000464139 ZNF608Q9ULD9 1512 aaPredicted RBP29.82■■■□□ 2.36
TUBGCP3-204ENST00000464139 MAPKBP1O60336 1514 aa29.79■■■□□ 2.36
TUBGCP3-204ENST00000464139 NEUROD1Q13562 356 aa29.79■■■□□ 2.36
TUBGCP3-204ENST00000464139 ACIN1Q9UKV3 1341 aaKnown RBP29.78■■■□□ 2.36
TUBGCP3-204ENST00000464139 MIER1Q8N108 512 aa29.78■■■□□ 2.36
TUBGCP3-204ENST00000464139 FGD6Q6ZV73 1430 aa29.78■■■□□ 2.36
TUBGCP3-204ENST00000464139 IFT140Q96RY7 1462 aa29.78■■■□□ 2.36
TUBGCP3-204ENST00000464139 WDR62O43379 1518 aa29.77■■■□□ 2.36
TUBGCP3-204ENST00000464139 IQGAP2Q13576 1575 aa29.77■■■□□ 2.36
TUBGCP3-204ENST00000464139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.76■■■□□ 2.354e-17■■■■■ 27.2
TUBGCP3-204ENST00000464139 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
TUBGCP3-204ENST00000464139 NCOA2Q15596 1464 aa29.71■■■□□ 2.35
TUBGCP3-204ENST00000464139 ERCC6Q03468 1493 aa29.7■■■□□ 2.35
TUBGCP3-204ENST00000464139 CENPBP07199 599 aaPredicted RBP29.69■■■□□ 2.34
TUBGCP3-204ENST00000464139 EHBP1L1Q8N3D4 1523 aa29.65■■■□□ 2.34
TUBGCP3-204ENST00000464139 SUPT6HQ7KZ85 1726 aaKnown RBP29.65■■■□□ 2.34
TUBGCP3-204ENST00000464139 MAGI3Q5TCQ9 1506 aa29.65■■■□□ 2.34
TUBGCP3-204ENST00000464139 MYOM3Q5VTT5 1437 aa29.64■■■□□ 2.34
TUBGCP3-204ENST00000464139 SIN3AQ96ST3 1273 aa29.62■■■□□ 2.33
TUBGCP3-204ENST00000464139 CCDC18Q5T9S5 1454 aa29.61■■■□□ 2.33
TUBGCP3-204ENST00000464139 PTPRKQ15262 1439 aa29.61■■■□□ 2.33
TUBGCP3-204ENST00000464139 YTHDC1Q96MU7 727 aaKnown RBP29.61■■■□□ 2.33
TUBGCP3-204ENST00000464139 HECW1Q76N89 1606 aa29.6■■■□□ 2.33
TUBGCP3-204ENST00000464139 EIF4G3O43432 1585 aaKnown RBP29.59■■■□□ 2.33
TUBGCP3-204ENST00000464139 ARID3CA6NKF2 412 aa29.58■■■□□ 2.33
TUBGCP3-204ENST00000464139 UGGT2Q9NYU1 1516 aa29.58■■■□□ 2.33
TUBGCP3-204ENST00000464139 EPRSP07814 1512 aaKnown RBP29.56■■■□□ 2.32
TUBGCP3-204ENST00000464139 CDK13Q14004 1512 aaKnown RBP29.54■■■□□ 2.32
TUBGCP3-204ENST00000464139 ARHGEF11O15085 1522 aa29.53■■■□□ 2.32
TUBGCP3-204ENST00000464139 KIAA0586Q9BVV6 1533 aa29.53■■■□□ 2.32
TUBGCP3-204ENST00000464139 GRIN2AQ12879 1464 aa29.51■■■□□ 2.31
TUBGCP3-204ENST00000464139 PTPN23Q9H3S7 1636 aa29.51■■■□□ 2.31
TUBGCP3-204ENST00000464139 HFM1A2PYH4 1435 aa29.49■■■□□ 2.31
TUBGCP3-204ENST00000464139 DISP1Q96F81 1524 aa29.47■■■□□ 2.31
TUBGCP3-204ENST00000464139 KIAA0556O60303 1618 aa29.45■■■□□ 2.31
TUBGCP3-204ENST00000464139 NAIPQ13075 1403 aa29.43■■■□□ 2.3
TUBGCP3-204ENST00000464139 GTF3C3Q9Y5Q9 886 aa29.42■■■□□ 2.3
TUBGCP3-204ENST00000464139 CHMP7Q8WUX9 453 aaPredicted RBP29.42■■■□□ 2.3
TUBGCP3-204ENST00000464139 MAGI1Q96QZ7 1491 aaPredicted RBP29.39■■■□□ 2.29
TUBGCP3-204ENST00000464139 FBLN2P98095 1184 aa29.38■■■□□ 2.29
TUBGCP3-204ENST00000464139 CHIC2Q9UKJ5 165 aa29.38■■■□□ 2.29
TUBGCP3-204ENST00000464139 TCOF1Q13428 1488 aaKnown RBP29.38■■■□□ 2.29
TUBGCP3-204ENST00000464139 UACAQ9BZF9 1416 aa29.37■■■□□ 2.29
TUBGCP3-204ENST00000464139 RRP7BPQ9NSQ0 103 aa29.36■■■□□ 2.29
TUBGCP3-204ENST00000464139 TIMELESSQ9UNS1 1208 aa29.35■■■□□ 2.29
TUBGCP3-204ENST00000464139 SYNJ2O15056 1496 aa29.34■■■□□ 2.29
TUBGCP3-204ENST00000464139 CEP170Q5SW79 1584 aa29.33■■■□□ 2.29
TUBGCP3-204ENST00000464139 NUP153P49790 1475 aaKnown RBP29.33■■■□□ 2.29
TUBGCP3-204ENST00000464139 RAPGEF6Q8TEU7 1601 aa29.3■■■□□ 2.28
TUBGCP3-204ENST00000464139 MIA2Q96PC5 1412 aa29.3■■■□□ 2.28
TUBGCP3-204ENST00000464139 PPP1R15AO75807 674 aaPredicted RBP29.29■■■□□ 2.28
TUBGCP3-204ENST00000464139 TONSLQ96HA7 1378 aa29.22■■■□□ 2.27
TUBGCP3-204ENST00000464139 GCC2Q8IWJ2 1684 aa29.2■■■□□ 2.27
TUBGCP3-204ENST00000464139 CDK11AQ9UQ88 783 aaPredicted RBP29.2■■■□□ 2.26
TUBGCP3-204ENST00000464139 JPH4Q96JJ6 628 aa29.19■■■□□ 2.26
TUBGCP3-204ENST00000464139 PLB1Q6P1J6 1458 aa29.19■■■□□ 2.26
TUBGCP3-204ENST00000464139 KDM6BO15054 1643 aa29.18■■■□□ 2.26
TUBGCP3-204ENST00000464139 NUP160Q12769 1436 aa29.18■■■□□ 2.26
TUBGCP3-204ENST00000464139 TRIM52Q96A61 297 aa29.17■■■□□ 2.26
TUBGCP3-204ENST00000464139 HIRIP3Q9BW71 556 aaPredicted RBP29.16■■■□□ 2.26
TUBGCP3-204ENST00000464139 ZNF644Q9H582 1327 aaPredicted RBP29.16■■■□□ 2.26
TUBGCP3-204ENST00000464139 AKNAQ7Z591 1439 aa29.15■■■□□ 2.26
TUBGCP3-204ENST00000464139 PRG4Q92954 1404 aaPredicted RBP29.14■■■□□ 2.26
TUBGCP3-204ENST00000464139 CARMIL2Q6F5E8 1435 aa29.13■■■□□ 2.25
TUBGCP3-204ENST00000464139 DDX10Q13206 875 aaKnown RBP29.11■■■□□ 2.25
TUBGCP3-204ENST00000464139 DAPK1P53355 1430 aa29.1■■■□□ 2.25
TUBGCP3-204ENST00000464139 DENND4BO75064 1496 aaPredicted RBP29.09■■■□□ 2.25
TUBGCP3-204ENST00000464139 TROQ12816 1431 aaPredicted RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms