RNA–Protein interactions for RNA: ENST00000464083.5

FGD2-204, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

TSL 2

Gene FGD2, Length 2,723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-204ENST00000464083 RAB3GAP2Q9H2M9 1393 aa22.36■■□□□ 1.17
FGD2-204ENST00000464083 CCER2I3L3R5 266 aa22.35■■□□□ 1.17
FGD2-204ENST00000464083 HIRIP3Q9BW71 556 aaPredicted RBP22.35■■□□□ 1.17
FGD2-204ENST00000464083 SIN3AQ96ST3 1273 aa22.32■■□□□ 1.16
FGD2-204ENST00000464083 IRX6P78412 446 aaPredicted RBP22.31■■□□□ 1.16
FGD2-204ENST00000464083 CDK11AQ9UQ88 783 aaPredicted RBP22.3■■□□□ 1.16
FGD2-204ENST00000464083 ANP32CO43423 234 aa22.29■■□□□ 1.16
FGD2-204ENST00000464083 DEKP35659 375 aaKnown RBP22.28■■□□□ 1.16
FGD2-204ENST00000464083 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
FGD2-204ENST00000464083 PRXQ9BXM0 1461 aa22.18■■□□□ 1.14
FGD2-204ENST00000464083 ERICH3Q5RHP9 1530 aa22.18■■□□□ 1.14
FGD2-204ENST00000464083 SETD5Q9C0A6 1442 aa22.17■■□□□ 1.14
FGD2-204ENST00000464083 CFTRP13569 1480 aa22.16■■□□□ 1.14
FGD2-204ENST00000464083 HNRNPUQ00839 825 aaKnown RBP eCLIP22.13■■□□□ 1.13
FGD2-204ENST00000464083 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
FGD2-204ENST00000464083 CADPSQ9ULU8 1353 aa22.07■■□□□ 1.12
FGD2-204ENST00000464083 ARHGAP35Q9NRY4 1499 aa22.06■■□□□ 1.12
FGD2-204ENST00000464083 ANO8Q9HCE9 1232 aaPredicted RBP22.06■■□□□ 1.12
FGD2-204ENST00000464083 TIMELESSQ9UNS1 1208 aa22.05■■□□□ 1.12
FGD2-204ENST00000464083 NBR1Q14596 966 aa22.04■■□□□ 1.12
FGD2-204ENST00000464083 PPP4R2Q9NY27 417 aa22.04■■□□□ 1.12
FGD2-204ENST00000464083 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
FGD2-204ENST00000464083 CUX1P39880 1505 aa22■■□□□ 1.11
FGD2-204ENST00000464083 PAK3O75914 559 aaPredicted RBP22■■□□□ 1.11
FGD2-204ENST00000464083 NOP58Q9Y2X3 529 aaKnown RBP21.99■■□□□ 1.11
FGD2-204ENST00000464083 FAM50AQ14320 339 aaKnown RBP21.98■■□□□ 1.11
FGD2-204ENST00000464083 B4GALNT3Q6L9W6 998 aa21.98■■□□□ 1.11
FGD2-204ENST00000464083 ERICH6BQ5W0A0 696 aa21.98■■□□□ 1.11
FGD2-204ENST00000464083 PHLDB1Q86UU1 1377 aa21.97■■□□□ 1.11
FGD2-204ENST00000464083 BIVM-ERCC5R4GMW8 1640 aa21.96■■□□□ 1.11
FGD2-204ENST00000464083 TIAM1Q13009 1591 aa21.94■■□□□ 1.1
FGD2-204ENST00000464083 NESP48681 1621 aa21.94■■□□□ 1.1
FGD2-204ENST00000464083 PRDM2Q13029 1718 aa21.91■■□□□ 1.1
FGD2-204ENST00000464083 SALL2Q9Y467 1007 aaPredicted RBP21.89■■□□□ 1.09
FGD2-204ENST00000464083 TONSLQ96HA7 1378 aa21.88■■□□□ 1.09
FGD2-204ENST00000464083 LRRC9Q6ZRR7 1453 aa21.88■■□□□ 1.09
FGD2-204ENST00000464083 CCDC184Q52MB2 194 aa21.86■■□□□ 1.09
FGD2-204ENST00000464083 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
FGD2-204ENST00000464083 MAP3K1Q13233 1512 aa21.84■■□□□ 1.09
FGD2-204ENST00000464083 KIF27Q86VH2 1401 aa21.83■■□□□ 1.09
FGD2-204ENST00000464083 IL27Q8NEV9 243 aa21.78■■□□□ 1.08
FGD2-204ENST00000464083 WASHC2AQ641Q2 1341 aa21.78■■□□□ 1.08
FGD2-204ENST00000464083 FAM9BQ8IZU0 186 aa21.74■■□□□ 1.07
FGD2-204ENST00000464083 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
FGD2-204ENST00000464083 RTL5Q5HYW3 569 aaPredicted RBP21.73■■□□□ 1.07
FGD2-204ENST00000464083 CCDC136Q96JN2 1154 aa21.73■■□□□ 1.07
FGD2-204ENST00000464083 IPO9Q96P70 1041 aaKnown RBP21.73■■□□□ 1.07
FGD2-204ENST00000464083 FGD5Q6ZNL6 1462 aa21.73■■□□□ 1.07
FGD2-204ENST00000464083 RTN4Q9NQC3 1192 aaKnown RBP21.71■■□□□ 1.07
FGD2-204ENST00000464083 KDM5BQ9UGL1 1544 aa21.7■■□□□ 1.06
FGD2-204ENST00000464083 HSPA5P11021 654 aaKnown RBP21.7■■□□□ 1.06
FGD2-204ENST00000464083 ZBED9Q6R2W3 1325 aa21.69■■□□□ 1.06
FGD2-204ENST00000464083 LAMC3Q9Y6N6 1575 aa21.69■■□□□ 1.06
FGD2-204ENST00000464083 ANP32AP39687 249 aaKnown RBP21.69■■□□□ 1.06
FGD2-204ENST00000464083 ZBTB47Q9UFB7 747 aaPredicted RBP21.67■■□□□ 1.06
FGD2-204ENST00000464083 ATP1B4Q9UN42 357 aaPredicted RBP21.67■■□□□ 1.06
FGD2-204ENST00000464083 CCDC18Q5T9S5 1454 aa21.66■■□□□ 1.06
FGD2-204ENST00000464083 CFAP43Q8NDM7 1665 aa21.65■■□□□ 1.06
FGD2-204ENST00000464083 MRS2Q9HD23 443 aa21.65■■□□□ 1.06
FGD2-204ENST00000464083 CNTLNQ9NXG0 1405 aa21.64■■□□□ 1.05
FGD2-204ENST00000464083 PRKRIP1Q9H875 184 aaPredicted RBP21.63■■□□□ 1.05
FGD2-204ENST00000464083 P3H3Q8IVL6 736 aa21.63■■□□□ 1.05
FGD2-204ENST00000464083 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
FGD2-204ENST00000464083 PCF11O94913 1555 aaKnown RBP21.62■■□□□ 1.05
FGD2-204ENST00000464083 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
FGD2-204ENST00000464083 NCOA2Q15596 1464 aa21.62■■□□□ 1.05
FGD2-204ENST00000464083 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
FGD2-204ENST00000464083 AKNAQ7Z591 1439 aa21.61■■□□□ 1.05
FGD2-204ENST00000464083 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
FGD2-204ENST00000464083 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
FGD2-204ENST00000464083 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.59■■□□□ 1.05
FGD2-204ENST00000464083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.59■■□□□ 1.05
FGD2-204ENST00000464083 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.05
FGD2-204ENST00000464083 IGF1RP08069 1367 aa21.58■■□□□ 1.05
FGD2-204ENST00000464083 C11orf95C9JLR9 678 aaPredicted RBP21.58■■□□□ 1.05
FGD2-204ENST00000464083 PTPRKQ15262 1439 aa21.58■■□□□ 1.04
FGD2-204ENST00000464083 URB2Q14146 1524 aaKnown RBP21.57■■□□□ 1.04
FGD2-204ENST00000464083 POLA1P09884 1462 aaPredicted RBP21.57■■□□□ 1.04
FGD2-204ENST00000464083 EIF4G2P78344 907 aaKnown RBP eCLIP21.55■■□□□ 1.04
FGD2-204ENST00000464083 HFM1A2PYH4 1435 aa21.54■■□□□ 1.04
FGD2-204ENST00000464083 PTPN23Q9H3S7 1636 aa21.54■■□□□ 1.04
FGD2-204ENST00000464083 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
FGD2-204ENST00000464083 FGD6Q6ZV73 1430 aa21.52■■□□□ 1.04
FGD2-204ENST00000464083 SMG6Q86US8 1419 aaKnown RBP21.51■■□□□ 1.03
FGD2-204ENST00000464083 CARMIL1Q5VZK9 1371 aa21.5■■□□□ 1.03
FGD2-204ENST00000464083 CCDC7Q96M83 1385 aa21.5■■□□□ 1.03
FGD2-204ENST00000464083 LAS1LQ9Y4W2 734 aaKnown RBP21.49■■□□□ 1.03
FGD2-204ENST00000464083 RNF123Q5XPI4 1314 aa21.49■■□□□ 1.03
FGD2-204ENST00000464083 NAIPQ13075 1403 aa21.48■■□□□ 1.03
FGD2-204ENST00000464083 NPM2Q86SE8 214 aaKnown RBP21.48■■□□□ 1.03
FGD2-204ENST00000464083 FHOD3Q2V2M9 1422 aa21.47■■□□□ 1.03
FGD2-204ENST00000464083 NCOA1Q15788 1441 aa21.47■■□□□ 1.03
FGD2-204ENST00000464083 NEFMP07197 916 aa21.46■■□□□ 1.03
FGD2-204ENST00000464083 NUDCQ9Y266 331 aa21.46■■□□□ 1.03
FGD2-204ENST00000464083 ABCA10Q8WWZ4 1543 aa21.44■■□□□ 1.02
FGD2-204ENST00000464083 SENP3-EIF4A1A0A087X0R7 540 aa21.44■■□□□ 1.02
FGD2-204ENST00000464083 FYCO1Q9BQS8 1478 aa21.42■■□□□ 1.02
FGD2-204ENST00000464083 WASHC2CQ9Y4E1 1318 aa21.4■■□□□ 1.02
FGD2-204ENST00000464083 TDRD9Q8NDG6 1382 aaKnown RBP21.4■■□□□ 1.02
FGD2-204ENST00000464083 FMN1Q68DA7 1419 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms