RNA–Protein interactions for RNA: ENST00000463820.5

NELFA-212, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,495 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-212ENST00000463820 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
NELFA-212ENST00000463820 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
NELFA-212ENST00000463820 ARAP1Q96P48 1450 aa25.23■■□□□ 1.63
NELFA-212ENST00000463820 AQRO60306 1485 aaKnown RBP eCLIP25.2■■□□□ 1.632e-7■■■□□ 16.5
NELFA-212ENST00000463820 WDR62O43379 1518 aa25.2■■□□□ 1.62
NELFA-212ENST00000463820 ARHGAP35Q9NRY4 1499 aa25.18■■□□□ 1.62
NELFA-212ENST00000463820 CUL7Q14999 1698 aa25.16■■□□□ 1.62
NELFA-212ENST00000463820 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.62
NELFA-212ENST00000463820 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
NELFA-212ENST00000463820 APLP2Q06481 763 aa25.09■■□□□ 1.61
NELFA-212ENST00000463820 P3H3Q8IVL6 736 aa25.08■■□□□ 1.61
NELFA-212ENST00000463820 YTHDC1Q96MU7 727 aaKnown RBP25.08■■□□□ 1.61
NELFA-212ENST00000463820 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
NELFA-212ENST00000463820 MIER1Q8N108 512 aa25.06■■□□□ 1.6
NELFA-212ENST00000463820 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
NELFA-212ENST00000463820 GRIN2BQ13224 1484 aa24.97■■□□□ 1.59
NELFA-212ENST00000463820 KANK4Q5T7N3 995 aaPredicted RBP24.96■■□□□ 1.59
NELFA-212ENST00000463820 CTTNBP2Q8WZ74 1663 aa24.96■■□□□ 1.59
NELFA-212ENST00000463820 FHAD1B1AJZ9 1412 aa24.94■■□□□ 1.58
NELFA-212ENST00000463820 FHOD3Q2V2M9 1422 aa24.94■■□□□ 1.58
NELFA-212ENST00000463820 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
NELFA-212ENST00000463820 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
NELFA-212ENST00000463820 SNAPC4Q5SXM2 1469 aa24.87■■□□□ 1.57
NELFA-212ENST00000463820 CLSPNQ9HAW4 1339 aa24.86■■□□□ 1.57
NELFA-212ENST00000463820 ATP1B4Q9UN42 357 aaPredicted RBP24.84■■□□□ 1.57
NELFA-212ENST00000463820 EFCAB5A4FU69 1503 aa24.81■■□□□ 1.56
NELFA-212ENST00000463820 PCF11O94913 1555 aaKnown RBP24.78■■□□□ 1.56
NELFA-212ENST00000463820 DHX57Q6P158 1386 aaKnown RBP24.78■■□□□ 1.56
NELFA-212ENST00000463820 FBLN2P98095 1184 aa24.75■■□□□ 1.55
NELFA-212ENST00000463820 SAMD9Q5K651 1589 aa24.74■■□□□ 1.55
NELFA-212ENST00000463820 GRIN2AQ12879 1464 aa24.71■■□□□ 1.55
NELFA-212ENST00000463820 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
NELFA-212ENST00000463820 CHMP7Q8WUX9 453 aaPredicted RBP24.71■■□□□ 1.55
NELFA-212ENST00000463820 TIAM1Q13009 1591 aa24.71■■□□□ 1.55
NELFA-212ENST00000463820 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
NELFA-212ENST00000463820 MYT1Q01538 1121 aa24.68■■□□□ 1.54
NELFA-212ENST00000463820 FMN1Q68DA7 1419 aa24.66■■□□□ 1.54
NELFA-212ENST00000463820 CASKIN1Q8WXD9 1431 aa24.66■■□□□ 1.54
NELFA-212ENST00000463820 SYNJ2O15056 1496 aa24.65■■□□□ 1.54
NELFA-212ENST00000463820 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.54
NELFA-212ENST00000463820 LRRC9Q6ZRR7 1453 aa24.63■■□□□ 1.53
NELFA-212ENST00000463820 RRBP1Q9P2E9 1410 aaKnown RBP24.63■■□□□ 1.53
NELFA-212ENST00000463820 MAP3K1Q13233 1512 aa24.62■■□□□ 1.53
NELFA-212ENST00000463820 KIAA0586Q9BVV6 1533 aa24.61■■□□□ 1.53
NELFA-212ENST00000463820 CEP170Q5SW79 1584 aa24.58■■□□□ 1.53
NELFA-212ENST00000463820 CFAP43Q8NDM7 1665 aa24.57■■□□□ 1.52
NELFA-212ENST00000463820 UGGT2Q9NYU1 1516 aa24.55■■□□□ 1.52
NELFA-212ENST00000463820 PHLDB1Q86UU1 1377 aa24.53■■□□□ 1.52
NELFA-212ENST00000463820 LRRIQ1Q96JM4 1722 aa24.53■■□□□ 1.52
NELFA-212ENST00000463820 DISP1Q96F81 1524 aa24.52■■□□□ 1.52
NELFA-212ENST00000463820 ARID3CA6NKF2 412 aa24.51■■□□□ 1.51
NELFA-212ENST00000463820 CCNB3Q8WWL7 1395 aa24.5■■□□□ 1.51
NELFA-212ENST00000463820 ITGAEP38570 1179 aa24.5■■□□□ 1.51
NELFA-212ENST00000463820 NUP160Q12769 1436 aa24.48■■□□□ 1.51
NELFA-212ENST00000463820 KIAA0556O60303 1618 aa24.47■■□□□ 1.51
NELFA-212ENST00000463820 JPH4Q96JJ6 628 aa24.44■■□□□ 1.5
NELFA-212ENST00000463820 MTUS2Q5JR59 1369 aa24.43■■□□□ 1.5
NELFA-212ENST00000463820 CDK13Q14004 1512 aaKnown RBP24.37■■□□□ 1.49
NELFA-212ENST00000463820 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
NELFA-212ENST00000463820 MAGI3Q5TCQ9 1506 aa24.37■■□□□ 1.49
NELFA-212ENST00000463820 RAB3GAP2Q9H2M9 1393 aa24.36■■□□□ 1.49
NELFA-212ENST00000463820 EPRSP07814 1512 aaKnown RBP24.36■■□□□ 1.49
NELFA-212ENST00000463820 HECW1Q76N89 1606 aa24.35■■□□□ 1.49
NELFA-212ENST00000463820 CHD1O14646 1710 aa24.34■■□□□ 1.49
NELFA-212ENST00000463820 MAPKBP1O60336 1514 aa24.33■■□□□ 1.49
NELFA-212ENST00000463820 SUPT16HQ9Y5B9 1047 aaKnown RBP24.33■■□□□ 1.49
NELFA-212ENST00000463820 CCDC18Q5T9S5 1454 aa24.31■■□□□ 1.48
NELFA-212ENST00000463820 NCOA2Q15596 1464 aa24.29■■□□□ 1.48
NELFA-212ENST00000463820 PLB1Q6P1J6 1458 aa24.29■■□□□ 1.48
NELFA-212ENST00000463820 KCNH8Q96L42 1107 aa24.28■■□□□ 1.48
NELFA-212ENST00000463820 NUP153P49790 1475 aaKnown RBP24.28■■□□□ 1.48
NELFA-212ENST00000463820 CARMIL2Q6F5E8 1435 aa24.28■■□□□ 1.48
NELFA-212ENST00000463820 EHBP1L1Q8N3D4 1523 aa24.26■■□□□ 1.47
NELFA-212ENST00000463820 RAPGEF6Q8TEU7 1601 aa24.25■■□□□ 1.47
NELFA-212ENST00000463820 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
NELFA-212ENST00000463820 PRG4Q92954 1404 aaPredicted RBP24.23■■□□□ 1.47
NELFA-212ENST00000463820 SETD5Q9C0A6 1442 aa24.22■■□□□ 1.47
NELFA-212ENST00000463820 SUPT6HQ7KZ85 1726 aaKnown RBP24.22■■□□□ 1.47
NELFA-212ENST00000463820 MYOM3Q5VTT5 1437 aa24.18■■□□□ 1.46
NELFA-212ENST00000463820 SIN3AQ96ST3 1273 aa24.18■■□□□ 1.46
NELFA-212ENST00000463820 ARHGEF11O15085 1522 aa24.16■■□□□ 1.46
NELFA-212ENST00000463820 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
NELFA-212ENST00000463820 TIMELESSQ9UNS1 1208 aa24.1■■□□□ 1.45
NELFA-212ENST00000463820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.09■■□□□ 1.457e-7■■■■■ 52.8
NELFA-212ENST00000463820 PTPRGP23470 1445 aa24.09■■□□□ 1.45
NELFA-212ENST00000463820 PTPRKQ15262 1439 aa24.09■■□□□ 1.45
NELFA-212ENST00000463820 DDX10Q13206 875 aaKnown RBP24.08■■□□□ 1.45
NELFA-212ENST00000463820 ABCA8O94911 1581 aa24.07■■□□□ 1.44
NELFA-212ENST00000463820 CDK11AQ9UQ88 783 aaPredicted RBP24.07■■□□□ 1.44
NELFA-212ENST00000463820 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
NELFA-212ENST00000463820 PTPN23Q9H3S7 1636 aa24.05■■□□□ 1.44
NELFA-212ENST00000463820 ATP10BO94823 1461 aa24.02■■□□□ 1.44
NELFA-212ENST00000463820 HIRIP3Q9BW71 556 aaPredicted RBP24.02■■□□□ 1.44
NELFA-212ENST00000463820 TSHZ2Q9NRE2 1034 aa24.01■■□□□ 1.43
NELFA-212ENST00000463820 TROQ12816 1431 aaPredicted RBP24.01■■□□□ 1.43
NELFA-212ENST00000463820 CLASP1Q7Z460 1538 aa23.99■■□□□ 1.43
NELFA-212ENST00000463820 ZNF644Q9H582 1327 aaPredicted RBP23.99■■□□□ 1.43
NELFA-212ENST00000463820 CHIC2Q9UKJ5 165 aa23.98■■□□□ 1.43
NELFA-212ENST00000463820 PPP1R15AO75807 674 aaPredicted RBP23.98■■□□□ 1.43
NELFA-212ENST00000463820 KIF14Q15058 1648 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms