RNA–Protein interactions for RNA: ENST00000463783.1

NCBP2-209, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 4,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-209ENST00000463783 GRIN2BQ13224 1484 aa12.98□□□□□ -0.33
NCBP2-209ENST00000463783 ERCC6L2Q5T890 1561 aa12.95□□□□□ -0.34
NCBP2-209ENST00000463783 GRIN2AQ12879 1464 aa12.94□□□□□ -0.34
NCBP2-209ENST00000463783 SYNJ2O15056 1496 aa12.94□□□□□ -0.34
NCBP2-209ENST00000463783 RAPGEF2Q9Y4G8 1499 aa12.94□□□□□ -0.34
NCBP2-209ENST00000463783 CCER1Q8TC90 406 aaPredicted RBP12.92□□□□□ -0.34
NCBP2-209ENST00000463783 TNIKQ9UKE5 1360 aa12.91□□□□□ -0.34
NCBP2-209ENST00000463783 TDRD9Q8NDG6 1382 aaKnown RBP12.9□□□□□ -0.34
NCBP2-209ENST00000463783 EEA1Q15075 1411 aa12.89□□□□□ -0.35
NCBP2-209ENST00000463783 UGGT2Q9NYU1 1516 aa12.89□□□□□ -0.35
NCBP2-209ENST00000463783 DISP1Q96F81 1524 aa12.89□□□□□ -0.35
NCBP2-209ENST00000463783 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
NCBP2-209ENST00000463783 NEUROD1Q13562 356 aa12.88□□□□□ -0.35
NCBP2-209ENST00000463783 FHAD1B1AJZ9 1412 aa12.87□□□□□ -0.35
NCBP2-209ENST00000463783 KIF27Q86VH2 1401 aa12.87□□□□□ -0.35
NCBP2-209ENST00000463783 KIAA0556O60303 1618 aa12.85□□□□□ -0.35
NCBP2-209ENST00000463783 IQGAP2Q13576 1575 aa12.83□□□□□ -0.36
NCBP2-209ENST00000463783 UBTFP17480 764 aaKnown RBP12.83□□□□□ -0.36
NCBP2-209ENST00000463783 GOLGA3Q08378 1498 aa12.81□□□□□ -0.36
NCBP2-209ENST00000463783 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
NCBP2-209ENST00000463783 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
NCBP2-209ENST00000463783 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
NCBP2-209ENST00000463783 DIEXFQ68CQ4 756 aaKnown RBP12.77□□□□□ -0.37
NCBP2-209ENST00000463783 ARAP1Q96P48 1450 aa12.76□□□□□ -0.37
NCBP2-209ENST00000463783 ADCY10Q96PN6 1610 aa12.76□□□□□ -0.37
NCBP2-209ENST00000463783 ABCA8O94911 1581 aa12.75□□□□□ -0.37
NCBP2-209ENST00000463783 ACIN1Q9UKV3 1341 aaKnown RBP12.75□□□□□ -0.37
NCBP2-209ENST00000463783 CFAP43Q8NDM7 1665 aa12.75□□□□□ -0.37
NCBP2-209ENST00000463783 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
NCBP2-209ENST00000463783 KIAA0586Q9BVV6 1533 aa12.74□□□□□ -0.37
NCBP2-209ENST00000463783 ARHGAP35Q9NRY4 1499 aa12.74□□□□□ -0.37
NCBP2-209ENST00000463783 CLIP1P30622 1438 aa12.73□□□□□ -0.37
NCBP2-209ENST00000463783 HNRNPUL2Q1KMD3 747 aaKnown RBP12.72□□□□□ -0.37
NCBP2-209ENST00000463783 CARMIL1Q5VZK9 1371 aa12.71□□□□□ -0.37
NCBP2-209ENST00000463783 EFCAB5A4FU69 1503 aa12.7□□□□□ -0.38
NCBP2-209ENST00000463783 KIF13AQ9H1H9 1805 aa12.68□□□□□ -0.38
NCBP2-209ENST00000463783 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
NCBP2-209ENST00000463783 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
NCBP2-209ENST00000463783 PCF11O94913 1555 aaKnown RBP12.66□□□□□ -0.38
NCBP2-209ENST00000463783 VPS8Q8N3P4 1428 aa12.66□□□□□ -0.38
NCBP2-209ENST00000463783 MAGI3Q5TCQ9 1506 aa12.66□□□□□ -0.38
NCBP2-209ENST00000463783 ARHGEF11O15085 1522 aa12.65□□□□□ -0.38
NCBP2-209ENST00000463783 KDM5BQ9UGL1 1544 aa12.64□□□□□ -0.39
NCBP2-209ENST00000463783 ZCCHC11Q5TAX3 1644 aaKnown RBP12.62□□□□□ -0.39
NCBP2-209ENST00000463783 MIER1Q8N108 512 aa12.62□□□□□ -0.39
NCBP2-209ENST00000463783 KANK4Q5T7N3 995 aaPredicted RBP12.62□□□□□ -0.39
NCBP2-209ENST00000463783 ABCC2Q92887 1545 aa12.61□□□□□ -0.39
NCBP2-209ENST00000463783 ZNF316A6NFI3 1004 aaPredicted RBP12.61□□□□□ -0.39
NCBP2-209ENST00000463783 RAPGEF6Q8TEU7 1601 aa12.61□□□□□ -0.39
NCBP2-209ENST00000463783 UHRF1BP1LA0JNW5 1464 aa12.58□□□□□ -0.4
NCBP2-209ENST00000463783 YTHDC1Q96MU7 727 aaKnown RBP12.58□□□□□ -0.4
NCBP2-209ENST00000463783 NUP153P49790 1475 aaKnown RBP12.54□□□□□ -0.4
NCBP2-209ENST00000463783 MAP3K4Q9Y6R4 1608 aa12.53□□□□□ -0.4
NCBP2-209ENST00000463783 CDC42BPAQ5VT25 1732 aa12.53□□□□□ -0.4
NCBP2-209ENST00000463783 MAP3K1Q13233 1512 aa12.52□□□□□ -0.41
NCBP2-209ENST00000463783 CDC42BPBQ9Y5S2 1711 aa12.52□□□□□ -0.41
NCBP2-209ENST00000463783 DHX57Q6P158 1386 aaKnown RBP12.51□□□□□ -0.41
NCBP2-209ENST00000463783 MAPKBP1O60336 1514 aa12.49□□□□□ -0.41
NCBP2-209ENST00000463783 TIAM1Q13009 1591 aa12.48□□□□□ -0.41
NCBP2-209ENST00000463783 KIF14Q15058 1648 aa12.48□□□□□ -0.41
NCBP2-209ENST00000463783 PLB1Q6P1J6 1458 aa12.46□□□□□ -0.42
NCBP2-209ENST00000463783 FYCO1Q9BQS8 1478 aa12.46□□□□□ -0.42
NCBP2-209ENST00000463783 HECW1Q76N89 1606 aa12.45□□□□□ -0.42
NCBP2-209ENST00000463783 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
NCBP2-209ENST00000463783 ABCA9Q8IUA7 1624 aa12.45□□□□□ -0.42
NCBP2-209ENST00000463783 SIGLEC1Q9BZZ2 1709 aa12.45□□□□□ -0.42
NCBP2-209ENST00000463783 DIP2BQ9P265 1576 aa12.44□□□□□ -0.42
NCBP2-209ENST00000463783 TTC37Q6PGP7 1564 aa12.43□□□□□ -0.42
NCBP2-209ENST00000463783 CROCC2H7BZ55 1655 aa12.43□□□□□ -0.42
NCBP2-209ENST00000463783 FHOD3Q2V2M9 1422 aa12.42□□□□□ -0.42
NCBP2-209ENST00000463783 CASKIN1Q8WXD9 1431 aa12.42□□□□□ -0.42
NCBP2-209ENST00000463783 GLI2P10070 1586 aa12.42□□□□□ -0.42
NCBP2-209ENST00000463783 RRBP1Q9P2E9 1410 aaKnown RBP12.41□□□□□ -0.42
NCBP2-209ENST00000463783 ABCC10Q5T3U5 1492 aa12.4□□□□□ -0.42
NCBP2-209ENST00000463783 PREX2Q70Z35 1606 aa12.4□□□□□ -0.42
NCBP2-209ENST00000463783 CENPBP07199 599 aaPredicted RBP12.4□□□□□ -0.42
NCBP2-209ENST00000463783 CDK13Q14004 1512 aaKnown RBP12.4□□□□□ -0.43
NCBP2-209ENST00000463783 ATP10BO94823 1461 aa12.39□□□□□ -0.43
NCBP2-209ENST00000463783 EPRSP07814 1512 aaKnown RBP12.39□□□□□ -0.43
NCBP2-209ENST00000463783 FRMPD1Q5SYB0 1578 aa12.38□□□□□ -0.43
NCBP2-209ENST00000463783 KCNH8Q96L42 1107 aa12.37□□□□□ -0.43
NCBP2-209ENST00000463783 PELP1Q8IZL8 1130 aaKnown RBP12.37□□□□□ -0.43
NCBP2-209ENST00000463783 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.36□□□□□ -0.43
NCBP2-209ENST00000463783 APLP2Q06481 763 aa12.35□□□□□ -0.43
NCBP2-209ENST00000463783 ITGAEP38570 1179 aa12.35□□□□□ -0.43
NCBP2-209ENST00000463783 RICTORQ6R327 1708 aa12.35□□□□□ -0.43
NCBP2-209ENST00000463783 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
NCBP2-209ENST00000463783 ITSN2Q9NZM3 1697 aa12.32□□□□□ -0.44
NCBP2-209ENST00000463783 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
NCBP2-209ENST00000463783 PHLDB1Q86UU1 1377 aa12.31□□□□□ -0.44
NCBP2-209ENST00000463783 CCNB3Q8WWL7 1395 aa12.3□□□□□ -0.44
NCBP2-209ENST00000463783 UACAQ9BZF9 1416 aa12.3□□□□□ -0.44
NCBP2-209ENST00000463783 ARAP3Q8WWN8 1544 aa12.3□□□□□ -0.44
NCBP2-209ENST00000463783 BCORL1Q5H9F3 1711 aa12.3□□□□□ -0.44
NCBP2-209ENST00000463783 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
NCBP2-209ENST00000463783 SAMD9LQ8IVG5 1584 aa12.29□□□□□ -0.44
NCBP2-209ENST00000463783 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
NCBP2-209ENST00000463783 CHMP7Q8WUX9 453 aaPredicted RBP12.28□□□□□ -0.44
NCBP2-209ENST00000463783 OSCARQ8IYS5 282 aa12.27□□□□□ -0.44
NCBP2-209ENST00000463783 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms