RNA–Protein interactions for RNA: ENST00000463426.5

CUL4A-205, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-205ENST00000463426 CTTNBP2Q8WZ74 1663 aa43.02■■■■■ 4.48
CUL4A-205ENST00000463426 SHROOM2Q13796 1616 aa42.99■■■■■ 4.47
CUL4A-205ENST00000463426 IQGAP2Q13576 1575 aa42.95■■■■■ 4.47
CUL4A-205ENST00000463426 GOLGA3Q08378 1498 aa42.91■■■■■ 4.46
CUL4A-205ENST00000463426 ARHGEF11O15085 1522 aa42.83■■■■■ 4.45
CUL4A-205ENST00000463426 JPH4Q96JJ6 628 aa42.81■■■■■ 4.44
CUL4A-205ENST00000463426 RIMBP3CA6NJZ7 1639 aa42.78■■■■■ 4.44
CUL4A-205ENST00000463426 RIMBP3BA6NNM3 1639 aa42.78■■■■■ 4.44
CUL4A-205ENST00000463426 RIMBP3Q9UFD9 1639 aa42.78■■■■■ 4.44
CUL4A-205ENST00000463426 UGGT2Q9NYU1 1516 aa42.73■■■■■ 4.43
CUL4A-205ENST00000463426 PRG4Q92954 1404 aaPredicted RBP42.69■■■■■ 4.42
CUL4A-205ENST00000463426 CARMIL2Q6F5E8 1435 aa42.64■■■■■ 4.42
CUL4A-205ENST00000463426 UBTFP17480 764 aaKnown RBP42.61■■■■■ 4.41
CUL4A-205ENST00000463426 ERCC6L2Q5T890 1561 aa42.54■■■■■ 4.4
CUL4A-205ENST00000463426 DISP1Q96F81 1524 aa42.5■■■■■ 4.39
CUL4A-205ENST00000463426 KIAA0556O60303 1618 aa42.49■■■■■ 4.39
CUL4A-205ENST00000463426 ARAP1Q96P48 1450 aa42.49■■■■■ 4.39
CUL4A-205ENST00000463426 SAMD9Q5K651 1589 aa42.44■■■■■ 4.38
CUL4A-205ENST00000463426 TNIKQ9UKE5 1360 aa42.43■■■■■ 4.38
CUL4A-205ENST00000463426 EFCAB5A4FU69 1503 aa42.43■■■■■ 4.38
CUL4A-205ENST00000463426 EHMT2Q96KQ7 1210 aa42.39■■■■■ 4.38
CUL4A-205ENST00000463426 PTPRGP23470 1445 aa42.29■■■■■ 4.36
CUL4A-205ENST00000463426 CYB5RLQ6IPT4 315 aa42.27■■■■■ 4.36
CUL4A-205ENST00000463426 ARHGAP35Q9NRY4 1499 aa42.12■■■■■ 4.33
CUL4A-205ENST00000463426 RANGAP1P46060 587 aaPredicted RBP42.1■■■■■ 4.33
CUL4A-205ENST00000463426 LOC105371045A0A1W2PR82 267 aa42.09■■■■■ 4.33
CUL4A-205ENST00000463426 CLIP1P30622 1438 aa42.09■■■■■ 4.33
CUL4A-205ENST00000463426 UHRF1BP1LA0JNW5 1464 aa42.05■■■■■ 4.32
CUL4A-205ENST00000463426 FHOD3Q2V2M9 1422 aa42.05■■■■■ 4.32
CUL4A-205ENST00000463426 UACAQ9BZF9 1416 aa42.04■■■■■ 4.32
CUL4A-205ENST00000463426 P3H3Q8IVL6 736 aa42.03■■■■■ 4.32
CUL4A-205ENST00000463426 CEP162Q5TB80 1403 aa42.02■■■■■ 4.32
CUL4A-205ENST00000463426 ADCY10Q96PN6 1610 aa42.01■■■■■ 4.32
CUL4A-205ENST00000463426 ABCC2Q92887 1545 aa42■■■■■ 4.31
CUL4A-205ENST00000463426 ABCA8O94911 1581 aa41.99■■■■■ 4.31
CUL4A-205ENST00000463426 FMN1Q68DA7 1419 aa41.99■■■■■ 4.31
CUL4A-205ENST00000463426 TTBK1Q5TCY1 1321 aaPredicted RBP41.95■■■■■ 4.31
CUL4A-205ENST00000463426 RAPGEF6Q8TEU7 1601 aa41.91■■■■■ 4.3
CUL4A-205ENST00000463426 PLB1Q6P1J6 1458 aa41.9■■■■■ 4.3
CUL4A-205ENST00000463426 NPM1P06748 294 aaKnown RBP eCLIP41.84■■■■■ 4.29
CUL4A-205ENST00000463426 KDM5BQ9UGL1 1544 aa41.81■■■■■ 4.28
CUL4A-205ENST00000463426 MAPKBP1O60336 1514 aa41.74■■■■■ 4.27
CUL4A-205ENST00000463426 HECW1Q76N89 1606 aa41.73■■■■■ 4.27
CUL4A-205ENST00000463426 ZCCHC11Q5TAX3 1644 aaKnown RBP41.71■■■■■ 4.27
CUL4A-205ENST00000463426 NUP153P49790 1475 aaKnown RBP41.67■■■■■ 4.26
CUL4A-205ENST00000463426 CASKIN1Q8WXD9 1431 aa41.67■■■■■ 4.26
CUL4A-205ENST00000463426 FYCO1Q9BQS8 1478 aa41.65■■■■■ 4.26
CUL4A-205ENST00000463426 PCF11O94913 1555 aaKnown RBP41.62■■■■■ 4.25
CUL4A-205ENST00000463426 ATP10BO94823 1461 aa41.58■■■■■ 4.25
CUL4A-205ENST00000463426 CCDC18Q5T9S5 1454 aa41.53■■■■■ 4.24
CUL4A-205ENST00000463426 VPS8Q8N3P4 1428 aa41.53■■■■■ 4.24
CUL4A-205ENST00000463426 EPRSP07814 1512 aaKnown RBP41.5■■■■■ 4.23
CUL4A-205ENST00000463426 ASXL2Q76L83 1435 aa41.5■■■■■ 4.23
CUL4A-205ENST00000463426 WDR7Q9Y4E6 1490 aa41.45■■■■■ 4.23
CUL4A-205ENST00000463426 LRRIQ1Q96JM4 1722 aa41.43■■■■■ 4.22
CUL4A-205ENST00000463426 ATP1B4Q9UN42 357 aaPredicted RBP41.42■■■■■ 4.22
CUL4A-205ENST00000463426 ABCC10Q5T3U5 1492 aa41.39■■■■■ 4.22
CUL4A-205ENST00000463426 CDK13Q14004 1512 aaKnown RBP41.39■■■■■ 4.22
CUL4A-205ENST00000463426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.38■■■■■ 4.21
CUL4A-205ENST00000463426 HNRNPUL2Q1KMD3 747 aaKnown RBP41.38■■■■■ 4.21
CUL4A-205ENST00000463426 CDK11AQ9UQ88 783 aaPredicted RBP41.37■■■■■ 4.21
CUL4A-205ENST00000463426 DIP2BQ9P265 1576 aa41.35■■■■■ 4.21
CUL4A-205ENST00000463426 ARID3CA6NKF2 412 aa41.34■■■■■ 4.21
CUL4A-205ENST00000463426 KIF13AQ9H1H9 1805 aa41.33■■■■■ 4.21
CUL4A-205ENST00000463426 GLI2P10070 1586 aa41.32■■■■■ 4.2
CUL4A-205ENST00000463426 PLEKHD1A6NEE1 506 aa41.31■■■■■ 4.2
CUL4A-205ENST00000463426 CFAP43Q8NDM7 1665 aa41.24■■■■■ 4.19
CUL4A-205ENST00000463426 MAP3K1Q13233 1512 aa41.23■■■■■ 4.19
CUL4A-205ENST00000463426 TRHP20396 242 aaPredicted RBP41.22■■■■■ 4.19
CUL4A-205ENST00000463426 TROQ12816 1431 aaPredicted RBP41.18■■■■■ 4.18
CUL4A-205ENST00000463426 FAM69CQ0P6D2 419 aa41.16■■■■■ 4.18
CUL4A-205ENST00000463426 TIAM1Q13009 1591 aa41.16■■■■■ 4.18
CUL4A-205ENST00000463426 ABCA9Q8IUA7 1624 aa41.12■■■■■ 4.17
CUL4A-205ENST00000463426 KIF14Q15058 1648 aa41.11■■■■■ 4.17
CUL4A-205ENST00000463426 MAP3K4Q9Y6R4 1608 aa41.11■■■■■ 4.17
CUL4A-205ENST00000463426 KCNH8Q96L42 1107 aa41.08■■■■■ 4.17
CUL4A-205ENST00000463426 APLP2Q06481 763 aa41.07■■■■■ 4.17
CUL4A-205ENST00000463426 EHBP1L1Q8N3D4 1523 aa41.07■■■■■ 4.16
CUL4A-205ENST00000463426 MTUS2Q5JR59 1369 aa41.04■■■■■ 4.16
CUL4A-205ENST00000463426 MAGI3Q5TCQ9 1506 aa41.03■■■■■ 4.16
CUL4A-205ENST00000463426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.98■■■■■ 4.15
CUL4A-205ENST00000463426 CD109Q6YHK3 1445 aa40.96■■■■■ 4.15
CUL4A-205ENST00000463426 TSPOAP1O95153 1857 aa40.95■■■■■ 4.15
CUL4A-205ENST00000463426 LRRC9Q6ZRR7 1453 aa40.94■■■■■ 4.14
CUL4A-205ENST00000463426 TEX14Q8IWB6 1497 aa40.94■■■■■ 4.14
CUL4A-205ENST00000463426 TTC37Q6PGP7 1564 aa40.91■■■■■ 4.14
CUL4A-205ENST00000463426 SUPT6HQ7KZ85 1726 aaKnown RBP40.9■■■■■ 4.14
CUL4A-205ENST00000463426 MYO5CQ9NQX4 1742 aa40.9■■■■■ 4.14
CUL4A-205ENST00000463426 PPRC1Q5VV67 1664 aaKnown RBP40.89■■■■■ 4.14
CUL4A-205ENST00000463426 ARAP3Q8WWN8 1544 aa40.87■■■■■ 4.13
CUL4A-205ENST00000463426 CFAP74Q9C0B2 1584 aa40.82■■■■■ 4.13
CUL4A-205ENST00000463426 PLCH2O75038 1416 aa40.77■■■■■ 4.12
CUL4A-205ENST00000463426 PHLDB1Q86UU1 1377 aa40.77■■■■■ 4.12
CUL4A-205ENST00000463426 PREX2Q70Z35 1606 aa40.76■■■■■ 4.12
CUL4A-205ENST00000463426 CDC42BPAQ5VT25 1732 aa40.75■■■■■ 4.11
CUL4A-205ENST00000463426 ITSN2Q9NZM3 1697 aa40.75■■■■■ 4.11
CUL4A-205ENST00000463426 NEO1Q92859 1461 aa40.74■■■■■ 4.11
CUL4A-205ENST00000463426 NCOA2Q15596 1464 aa40.72■■■■■ 4.11
CUL4A-205ENST00000463426 KANK4Q5T7N3 995 aaPredicted RBP40.69■■■■■ 4.1
CUL4A-205ENST00000463426 CDC42BPBQ9Y5S2 1711 aa40.68■■■■■ 4.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms