RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 FGD5Q6ZNL6 1462 aa13.34□□□□□ -0.27
SHQ1-203ENST00000463369 POLA1P09884 1462 aaPredicted RBP13.32□□□□□ -0.28
SHQ1-203ENST00000463369 FKBP8Q14318 412 aa13.32□□□□□ -0.28
SHQ1-203ENST00000463369 WDR97A6NE52 1622 aa13.29□□□□□ -0.28
SHQ1-203ENST00000463369 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.28
SHQ1-203ENST00000463369 TARBP1Q13395 1621 aaKnown RBP13.27□□□□□ -0.29
SHQ1-203ENST00000463369 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
SHQ1-203ENST00000463369 SOGA1O94964 1423 aa13.26□□□□□ -0.29
SHQ1-203ENST00000463369 CUX2O14529 1486 aa13.25□□□□□ -0.29
SHQ1-203ENST00000463369 RAD54L2Q9Y4B4 1467 aa13.25□□□□□ -0.29
SHQ1-203ENST00000463369 ABCA10Q8WWZ4 1543 aa13.24□□□□□ -0.29
SHQ1-203ENST00000463369 CENPBP07199 599 aaPredicted RBP13.23□□□□□ -0.29
SHQ1-203ENST00000463369 RUSC2Q8N2Y8 1516 aa13.22□□□□□ -0.29
SHQ1-203ENST00000463369 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
SHQ1-203ENST00000463369 EEA1Q15075 1411 aa13.21□□□□□ -0.29
SHQ1-203ENST00000463369 IFT140Q96RY7 1462 aa13.2□□□□□ -0.3
SHQ1-203ENST00000463369 KIF27Q86VH2 1401 aa13.19□□□□□ -0.3
SHQ1-203ENST00000463369 ABCA5Q8WWZ7 1642 aa13.18□□□□□ -0.3
SHQ1-203ENST00000463369 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
SHQ1-203ENST00000463369 FAM9AQ8IZU1 332 aaPredicted RBP13.16□□□□□ -0.3
SHQ1-203ENST00000463369 NPM2Q86SE8 214 aaKnown RBP13.16□□□□□ -0.3
SHQ1-203ENST00000463369 PBRM1Q86U86 1689 aa13.15□□□□□ -0.3
SHQ1-203ENST00000463369 C14orf37Q86TY3 774 aa13.15□□□□□ -0.3
SHQ1-203ENST00000463369 GAPVD1Q14C86 1478 aa13.12□□□□□ -0.31
SHQ1-203ENST00000463369 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
SHQ1-203ENST00000463369 ZNF608Q9ULD9 1512 aaPredicted RBP13.12□□□□□ -0.31
SHQ1-203ENST00000463369 EIF4G3O43432 1585 aaKnown RBP13.12□□□□□ -0.31
SHQ1-203ENST00000463369 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
SHQ1-203ENST00000463369 DIEXFQ68CQ4 756 aaKnown RBP13.09□□□□□ -0.31
SHQ1-203ENST00000463369 AQRO60306 1485 aaKnown RBP eCLIP13.09□□□□□ -0.31
SHQ1-203ENST00000463369 KIF21BO75037 1637 aa13.09□□□□□ -0.31
SHQ1-203ENST00000463369 IGF1RP08069 1367 aa13.09□□□□□ -0.31
SHQ1-203ENST00000463369 CUL7Q14999 1698 aa13.09□□□□□ -0.31
SHQ1-203ENST00000463369 FBLN2P98095 1184 aa13.06□□□□□ -0.32
SHQ1-203ENST00000463369 GRIN2BQ13224 1484 aa13.05□□□□□ -0.32
SHQ1-203ENST00000463369 PRXQ9BXM0 1461 aa13.05□□□□□ -0.32
SHQ1-203ENST00000463369 EIF5BO60841 1220 aaKnown RBP13.04□□□□□ -0.32
SHQ1-203ENST00000463369 CARMIL1Q5VZK9 1371 aa13.02□□□□□ -0.33
SHQ1-203ENST00000463369 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
SHQ1-203ENST00000463369 GOLGA3Q08378 1498 aa13□□□□□ -0.33
SHQ1-203ENST00000463369 RAPGEF2Q9Y4G8 1499 aa13□□□□□ -0.33
SHQ1-203ENST00000463369 MAGI1Q96QZ7 1491 aaPredicted RBP12.99□□□□□ -0.33
SHQ1-203ENST00000463369 SNAPC4Q5SXM2 1469 aa12.98□□□□□ -0.33
SHQ1-203ENST00000463369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.98□□□□□ -0.33
SHQ1-203ENST00000463369 CCER1Q8TC90 406 aaPredicted RBP12.98□□□□□ -0.33
SHQ1-203ENST00000463369 FHAD1B1AJZ9 1412 aa12.97□□□□□ -0.33
SHQ1-203ENST00000463369 PPP4R3CPQ6ZMV5 832 aa12.96□□□□□ -0.33
SHQ1-203ENST00000463369 CTTNBP2Q8WZ74 1663 aa12.95□□□□□ -0.34
SHQ1-203ENST00000463369 CHD1O14646 1710 aa12.93□□□□□ -0.34
SHQ1-203ENST00000463369 PPP6R1Q9UPN7 881 aa12.93□□□□□ -0.34
SHQ1-203ENST00000463369 SYNJ2O15056 1496 aa12.93□□□□□ -0.34
SHQ1-203ENST00000463369 UBTFP17480 764 aaKnown RBP12.92□□□□□ -0.34
SHQ1-203ENST00000463369 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
SHQ1-203ENST00000463369 TNIKQ9UKE5 1360 aa12.92□□□□□ -0.34
SHQ1-203ENST00000463369 GRIN2AQ12879 1464 aa12.9□□□□□ -0.34
SHQ1-203ENST00000463369 CHMP7Q8WUX9 453 aaPredicted RBP12.87□□□□□ -0.35
SHQ1-203ENST00000463369 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
SHQ1-203ENST00000463369 CEP170Q5SW79 1584 aa12.84□□□□□ -0.35
SHQ1-203ENST00000463369 ZNF316A6NFI3 1004 aaPredicted RBP12.83□□□□□ -0.36
SHQ1-203ENST00000463369 NUP160Q12769 1436 aa12.82□□□□□ -0.36
SHQ1-203ENST00000463369 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
SHQ1-203ENST00000463369 CEP162Q5TB80 1403 aa12.81□□□□□ -0.36
SHQ1-203ENST00000463369 IQGAP2Q13576 1575 aa12.81□□□□□ -0.36
SHQ1-203ENST00000463369 KIAA0586Q9BVV6 1533 aa12.8□□□□□ -0.36
SHQ1-203ENST00000463369 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
SHQ1-203ENST00000463369 CLIP1P30622 1438 aa12.77□□□□□ -0.37
SHQ1-203ENST00000463369 SAMD9Q5K651 1589 aa12.75□□□□□ -0.37
SHQ1-203ENST00000463369 ANP32EQ9BTT0 268 aa12.74□□□□□ -0.37
SHQ1-203ENST00000463369 EFCAB5A4FU69 1503 aa12.74□□□□□ -0.37
SHQ1-203ENST00000463369 UGGT2Q9NYU1 1516 aa12.74□□□□□ -0.37
SHQ1-203ENST00000463369 MIER1Q8N108 512 aa12.74□□□□□ -0.37
SHQ1-203ENST00000463369 ARHGAP35Q9NRY4 1499 aa12.73□□□□□ -0.37
SHQ1-203ENST00000463369 CLASP1Q7Z460 1538 aa12.73□□□□□ -0.37
SHQ1-203ENST00000463369 SHROOM2Q13796 1616 aa12.72□□□□□ -0.37
SHQ1-203ENST00000463369 PIAS4Q8N2W9 510 aaPredicted RBP12.7□□□□□ -0.38
SHQ1-203ENST00000463369 ARAP1Q96P48 1450 aa12.69□□□□□ -0.38
SHQ1-203ENST00000463369 CLSPNQ9HAW4 1339 aa12.69□□□□□ -0.38
SHQ1-203ENST00000463369 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
SHQ1-203ENST00000463369 KIAA0556O60303 1618 aa12.68□□□□□ -0.38
SHQ1-203ENST00000463369 DISP1Q96F81 1524 aa12.68□□□□□ -0.38
SHQ1-203ENST00000463369 OSCARQ8IYS5 282 aa12.68□□□□□ -0.38
SHQ1-203ENST00000463369 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
SHQ1-203ENST00000463369 FHOD3Q2V2M9 1422 aa12.63□□□□□ -0.39
SHQ1-203ENST00000463369 CARMIL2Q6F5E8 1435 aa12.63□□□□□ -0.39
SHQ1-203ENST00000463369 VPS8Q8N3P4 1428 aa12.63□□□□□ -0.39
SHQ1-203ENST00000463369 SUPT16HQ9Y5B9 1047 aaKnown RBP12.63□□□□□ -0.39
SHQ1-203ENST00000463369 PRG4Q92954 1404 aaPredicted RBP12.62□□□□□ -0.39
SHQ1-203ENST00000463369 PLEKHG5O94827 1062 aa12.62□□□□□ -0.39
SHQ1-203ENST00000463369 TSHZ2Q9NRE2 1034 aa12.62□□□□□ -0.39
SHQ1-203ENST00000463369 FMN1Q68DA7 1419 aa12.6□□□□□ -0.39
SHQ1-203ENST00000463369 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
SHQ1-203ENST00000463369 ERCC6L2Q5T890 1561 aa12.59□□□□□ -0.39
SHQ1-203ENST00000463369 NBR1Q14596 966 aa12.58□□□□□ -0.4
SHQ1-203ENST00000463369 LRRIQ1Q96JM4 1722 aa12.58□□□□□ -0.4
SHQ1-203ENST00000463369 PCF11O94913 1555 aaKnown RBP12.57□□□□□ -0.4
SHQ1-203ENST00000463369 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
SHQ1-203ENST00000463369 CASKIN1Q8WXD9 1431 aa12.55□□□□□ -0.4
SHQ1-203ENST00000463369 FYCO1Q9BQS8 1478 aa12.55□□□□□ -0.4
SHQ1-203ENST00000463369 RAPGEF6Q8TEU7 1601 aa12.54□□□□□ -0.4
SHQ1-203ENST00000463369 HECW1Q76N89 1606 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms