RNA–Protein interactions for RNA: ENST00000463029.5

TMEM254-207, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 847 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-207ENST00000463029 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
TMEM254-207ENST00000463029 CLASP1Q7Z460 1538 aa14.75□□□□□ -0.05
TMEM254-207ENST00000463029 GAPVD1Q14C86 1478 aa14.75□□□□□ -0.05
TMEM254-207ENST00000463029 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
TMEM254-207ENST00000463029 ABCA10Q8WWZ4 1543 aa14.72□□□□□ -0.05
TMEM254-207ENST00000463029 PBRM1Q86U86 1689 aa14.7□□□□□ -0.06
TMEM254-207ENST00000463029 ABCA5Q8WWZ7 1642 aa14.69□□□□□ -0.06
TMEM254-207ENST00000463029 WRNQ14191 1432 aaPredicted RBP eCLIP14.68□□□□□ -0.06
TMEM254-207ENST00000463029 TOP2BQ02880 1626 aa14.62□□□□□ -0.07
TMEM254-207ENST00000463029 GRIN2AQ12879 1464 aa14.61□□□□□ -0.07
TMEM254-207ENST00000463029 BIVM-ERCC5R4GMW8 1640 aa14.6□□□□□ -0.07
TMEM254-207ENST00000463029 ADAMTS12P58397 1594 aa14.59□□□□□ -0.07
TMEM254-207ENST00000463029 FHAD1B1AJZ9 1412 aa14.57□□□□□ -0.08
TMEM254-207ENST00000463029 NUP160Q12769 1436 aa14.56□□□□□ -0.08
TMEM254-207ENST00000463029 CEP170Q5SW79 1584 aa14.55□□□□□ -0.08
TMEM254-207ENST00000463029 ERCC6L2Q5T890 1561 aa14.54□□□□□ -0.08
TMEM254-207ENST00000463029 ERICH3Q5RHP9 1530 aa14.53□□□□□ -0.08
TMEM254-207ENST00000463029 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
TMEM254-207ENST00000463029 SHROOM2Q13796 1616 aa14.46□□□□□ -0.09
TMEM254-207ENST00000463029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
TMEM254-207ENST00000463029 PRG4Q92954 1404 aaPredicted RBP14.44□□□□□ -0.1
TMEM254-207ENST00000463029 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
TMEM254-207ENST00000463029 JPH4Q96JJ6 628 aa14.43□□□□□ -0.1
TMEM254-207ENST00000463029 SLC4A1APQ9BWU0 796 aaKnown RBP14.4□□□□□ -0.1
TMEM254-207ENST00000463029 RUSC2Q8N2Y8 1516 aa14.38□□□□□ -0.11
TMEM254-207ENST00000463029 KIF27Q86VH2 1401 aa14.37□□□□□ -0.11
TMEM254-207ENST00000463029 IGF1RP08069 1367 aa14.36□□□□□ -0.11
TMEM254-207ENST00000463029 KIAA0586Q9BVV6 1533 aa14.32□□□□□ -0.12
TMEM254-207ENST00000463029 NPM1P06748 294 aaKnown RBP eCLIP14.32□□□□□ -0.12
TMEM254-207ENST00000463029 CUL7Q14999 1698 aa14.3□□□□□ -0.12
TMEM254-207ENST00000463029 U3KPZ7 1027 aaPredicted RBP14.3□□□□□ -0.12
TMEM254-207ENST00000463029 CARMIL1Q5VZK9 1371 aa14.27□□□□□ -0.12
TMEM254-207ENST00000463029 CACNB1Q02641 598 aaPredicted RBP14.27□□□□□ -0.13
TMEM254-207ENST00000463029 FAM69CQ0P6D2 419 aa14.27□□□□□ -0.13
TMEM254-207ENST00000463029 KIF13AQ9H1H9 1805 aa14.25□□□□□ -0.13
TMEM254-207ENST00000463029 ADCY10Q96PN6 1610 aa14.25□□□□□ -0.13
TMEM254-207ENST00000463029 MAPKBP1O60336 1514 aa14.25□□□□□ -0.13
TMEM254-207ENST00000463029 ABCC10Q5T3U5 1492 aa14.25□□□□□ -0.13
TMEM254-207ENST00000463029 TTBK1Q5TCY1 1321 aaPredicted RBP14.24□□□□□ -0.13
TMEM254-207ENST00000463029 C1QBPQ07021 282 aaKnown RBP14.24□□□□□ -0.13
TMEM254-207ENST00000463029 PTPRGP23470 1445 aa14.22□□□□□ -0.13
TMEM254-207ENST00000463029 DIP2BQ9P265 1576 aa14.2□□□□□ -0.14
TMEM254-207ENST00000463029 CARMIL2Q6F5E8 1435 aa14.19□□□□□ -0.14
TMEM254-207ENST00000463029 TNIKQ9UKE5 1360 aa14.18□□□□□ -0.14
TMEM254-207ENST00000463029 IQGAP2Q13576 1575 aa14.17□□□□□ -0.14
TMEM254-207ENST00000463029 ABCC2Q92887 1545 aa14.13□□□□□ -0.15
TMEM254-207ENST00000463029 RAPGEF2Q9Y4G8 1499 aa14.12□□□□□ -0.15
TMEM254-207ENST00000463029 ZBTB22O15209 634 aa14.12□□□□□ -0.15
TMEM254-207ENST00000463029 DISP1Q96F81 1524 aa14.1□□□□□ -0.15
TMEM254-207ENST00000463029 UACAQ9BZF9 1416 aa14.1□□□□□ -0.15
TMEM254-207ENST00000463029 KDM6BO15054 1643 aa14.1□□□□□ -0.15
TMEM254-207ENST00000463029 ASXL2Q76L83 1435 aa14.09□□□□□ -0.15
TMEM254-207ENST00000463029 UHRF1BP1LA0JNW5 1464 aa14.08□□□□□ -0.16
TMEM254-207ENST00000463029 PLB1Q6P1J6 1458 aa14.08□□□□□ -0.16
TMEM254-207ENST00000463029 TSPOAP1O95153 1857 aa14.08□□□□□ -0.16
TMEM254-207ENST00000463029 UGGT2Q9NYU1 1516 aa14.07□□□□□ -0.16
TMEM254-207ENST00000463029 KIAA0556O60303 1618 aa14.04□□□□□ -0.16
TMEM254-207ENST00000463029 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
TMEM254-207ENST00000463029 GLI2P10070 1586 aa14.03□□□□□ -0.16
TMEM254-207ENST00000463029 KDM5BQ9UGL1 1544 aa14.02□□□□□ -0.16
TMEM254-207ENST00000463029 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
TMEM254-207ENST00000463029 EPRSP07814 1512 aaKnown RBP14□□□□□ -0.17
TMEM254-207ENST00000463029 ZCCHC11Q5TAX3 1644 aaKnown RBP13.98□□□□□ -0.17
TMEM254-207ENST00000463029 KDM4FA0A1W2PPD8 638 aa13.98□□□□□ -0.17
TMEM254-207ENST00000463029 GOLGA3Q08378 1498 aa13.98□□□□□ -0.17
TMEM254-207ENST00000463029 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
TMEM254-207ENST00000463029 PPRC1Q5VV67 1664 aaKnown RBP13.97□□□□□ -0.17
TMEM254-207ENST00000463029 CTTNBP2Q8WZ74 1663 aa13.97□□□□□ -0.17
TMEM254-207ENST00000463029 TEX14Q8IWB6 1497 aa13.94□□□□□ -0.18
TMEM254-207ENST00000463029 WDR7Q9Y4E6 1490 aa13.94□□□□□ -0.18
TMEM254-207ENST00000463029 MYCNP04198 464 aaPredicted RBP13.94□□□□□ -0.18
TMEM254-207ENST00000463029 MAP3K4Q9Y6R4 1608 aa13.93□□□□□ -0.18
TMEM254-207ENST00000463029 COL17A1Q9UMD9 1497 aaPredicted RBP13.93□□□□□ -0.18
TMEM254-207ENST00000463029 ABCA8O94911 1581 aa13.92□□□□□ -0.18
TMEM254-207ENST00000463029 KCNH8Q96L42 1107 aa13.91□□□□□ -0.18
TMEM254-207ENST00000463029 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
TMEM254-207ENST00000463029 ARID3CA6NKF2 412 aa13.88□□□□□ -0.19
TMEM254-207ENST00000463029 FAM9AQ8IZU1 332 aaPredicted RBP13.88□□□□□ -0.19
TMEM254-207ENST00000463029 CD109Q6YHK3 1445 aa13.88□□□□□ -0.19
TMEM254-207ENST00000463029 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
TMEM254-207ENST00000463029 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
TMEM254-207ENST00000463029 CAPN15O75808 1086 aa13.85□□□□□ -0.19
TMEM254-207ENST00000463029 MAGI3Q5TCQ9 1506 aa13.85□□□□□ -0.19
TMEM254-207ENST00000463029 CFAP43Q8NDM7 1665 aa13.82□□□□□ -0.2
TMEM254-207ENST00000463029 ATP10BO94823 1461 aa13.81□□□□□ -0.2
TMEM254-207ENST00000463029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
TMEM254-207ENST00000463029 RANGAP1P46060 587 aaPredicted RBP13.81□□□□□ -0.2
TMEM254-207ENST00000463029 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
TMEM254-207ENST00000463029 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
TMEM254-207ENST00000463029 EEA1Q15075 1411 aa13.79□□□□□ -0.2
TMEM254-207ENST00000463029 SAMD9Q5K651 1589 aa13.79□□□□□ -0.2
TMEM254-207ENST00000463029 EHMT2Q96KQ7 1210 aa13.76□□□□□ -0.21
TMEM254-207ENST00000463029 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
TMEM254-207ENST00000463029 RAPGEF6Q8TEU7 1601 aa13.75□□□□□ -0.21
TMEM254-207ENST00000463029 FHOD3Q2V2M9 1422 aa13.74□□□□□ -0.21
TMEM254-207ENST00000463029 DSG3P32926 999 aa13.73□□□□□ -0.21
TMEM254-207ENST00000463029 ARAP3Q8WWN8 1544 aa13.73□□□□□ -0.21
TMEM254-207ENST00000463029 ABCA9Q8IUA7 1624 aa13.72□□□□□ -0.21
TMEM254-207ENST00000463029 NUP153P49790 1475 aaKnown RBP13.72□□□□□ -0.21
TMEM254-207ENST00000463029 PHLDB1Q86UU1 1377 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms